FFCP PHASE1:Mm9::chr9:72122680..72122693,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=235469|HGNC=|UniProt=Q68FE8,Q3TEI2|association_with_transcript=-12bp_to_ENSMUST00000043096,ENSMUST00000062088,ENSMUST00000098576,NM_146224,uc009qpn.1,uc009qpo.1,uc009qpp.1,uc009qpq.1,uc009qpr.1,uc009qps.1_5end|description=CAGE_peak_2_at_Zfp280d_5end|id=chr9:72122680..72122693,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.11e-07!94;UBERON:0002021!1.56e-07!10;UBERON:0000411!1.56e-07!10;UBERON:0001950!1.56e-07!10;UBERON:0007811!3.37e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.05e-08,10;UBERON:0000411,4.05e-08,10;UBERON:0001950,4.05e-08,10|phase1_expression=1.28119077683835,0,0,0.30246421130683,2.00358291978539,0.16787927191189,0.934450562382103,0.903863264091034,0.703943610758334,0.936258105287974,1.71217968225505,0.717949430958028,0.171200729931206,0.524522414513984,1.99865857089398,1.61980213911861,4.89693314689703,3.94327706697797,3.15363197293199,2.54633791078818,1.9559956734746,1.68794617041505,1.30599894569468,0.159992422793407,0.68822784320151,0,0,0.215471232685889,0.380046838912748,0,0.221730510655305,0.635030673459631,1.84519436275371,0,1.44425809875637,0.498703936075477,0.408338712524738,1.67412652294763,0,1.57057123192139,0.588231488031014,1.36609096991689,1.94204141212461,0.251793635951155,0.405507724878058,0,0,0.218025156380447,0,0,0.139986421625363,0,1.51004345451963,0.725362142011344,0.672187598284928,0.514518872071894,0,0,1.61853168687678,0,0,0.677689064138264,0,0,0.988866362566974,0,0,0.384218305321555,1.34796496001021,0.945041568321835,0.630974884054146,0.285650984403804,0,1.5923803897944,1.34183659425531,0.919218786610021,0,1.0214987046815,1.53606533256243,0.527545150920775,0.823388792421687,2.08365348222704,0,0,1.37518422999129,0.589257170947335,0.854230084794618,1.4911955666024,0.454357159999104,0.68014404096107,0.579728977403356,0,0,0,0,0.448026887097336,0.702222100658759,0.511290967734173,0.259786004602869,0,0.845060518660083,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,0.68510327831436,2.84831672011889,0.445326417194474,0.520455980298408,0.608930956624282,1.38369298353635,0.452167921657868,1.88141931417128,0.251333182659351,0.494389935468748,0.722996784599558,0,3.23533699894818,2.65009822152472,2.42437626567611,0,2.04946557908083,1.25668024088073,0.255457055208591,2.99537811264801,2.39961092397363,2.79554499560742,4.19413790333504,10.0650132620098,4.90051973240171,9.38651329038293,5.8814555185976,3.74018480207208,4.2182728397617,1.42575109390443,2.61254638281195,2.77995034277042,2.31486041475121,2.21204753036596,1.14951052216736,1.80062129805349,1.65775299619287,3.19771546011241,2.0498195245576,2.99845518591132,3.3631438196072,2.15567992932842,1.89106080167819,1.93546236580344,0.657587197282725,0.278047249225598,0.696504333044333,2.67516777330327,1.79130840136644,3.51106593656617,2.05878325691772,1.42081749697796,1.65700618028402,0.703578179943289,1.44049649168812,0.946978942340841,0.787056926989615,1.85120535464854,1.39520366850245,1.07309360559848,1.98501082024188,0.987359099480883,0.656669856316381,1.05389452409612,0.877199924551994,1.53685080703735,1.47627060636409,3.57492912559016,1.23485534855141,1.32167513193519,0.264450566663544,1.70630600428187,1.39342003116263,0.77320476793256,1.00841762311671,1.33426826306922,1.14135375667535,0.474529061544512,0.494096864172033,1.25667604400135,0.994782360205754,0.779856348476481,0,0,0.796565093017469,0.189667900953082,0.913988100877831,2.25415471346161,1.83286195060783,2.13347735884388,1.68325967736765,1.64414996523069,0.738050739898011,0.941992367048249,1.48076596706161,0,1.50160595144485,1.76903095601883,1.57403478669398,2.02860121388503,1.4470629585145,1.52775511068852,1.72617682470486,0.972811360650212,0.274561413188081,4.31304619582064,1.11642284300551,0.312037673114561,0.757736633841335,1.07638448113147,0,0.923765950833023,1.32643988239339,1.30371981153621,1.01847051465113,2.34690248288502,1.84256883185997,1.42826184531608,0.780534591431195,1.7339865851681,1.7717175171902,1.11618338060241,0.491589944147214,1.03610989119537,1.01254341007058,0,1.08781136763742,0,0.551873492609465,1.9266070798535,3.39913891117389,0.327869890753351,0.252470927204373,0,0,0.430846795465598,0.477937595905104,0.445597348164788,1.41538265394416,0,0.584511715822624,0,4.17717711348349,0.709700426041343,0.534196811001766,2.44330439030364,0.824850614862677,0,0.242780636154981,1.81394134178851,0.188605079755898,0,0.922305443831782,0.775284879504663,1.45413491791002,1.06949213515416,0.948110273807448,1.05418608574999,0,2.04263763452273,0.900305470156551,0,1.50035924522115,1.24138163549592,1.42695054081656,1.15184314421485,0.304464949114599,0,0.63549621259146,0,1.6488625294148,1.13025098687134,1.80938774784468,2.14870219205646,1.96969079694074,0,4.07935664423121,2.22132145037209,1.44470807574256,1.29636169158798,3.57900068308913,2.46049609897845,1.60144721244566,2.37969801991397,2.659077594149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| ||
|EntrezGene=235469 | |||
|HGNC= | |||
|UniProt=Q68FE8,Q3TEI2 | |||
|association_with_transcript=-12bp_to_ENSMUST00000043096,ENSMUST00000062088,ENSMUST00000098576,NM_146224,uc009qpn.1,uc009qpo.1,uc009qpp.1,uc009qpq.1,uc009qpr.1,uc009qps.1_5end | |||
|description=CAGE_peak_2_at_Zfp280d_5end | |||
|id=chr9:72122680..72122693,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.11e-07!94;UBERON:0002021!1.56e-07!10;UBERON:0000411!1.56e-07!10;UBERON:0001950!1.56e-07!10;UBERON:0007811!3.37e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.05e-08,10;UBERON:0000411,4.05e-08,10;UBERON:0001950,4.05e-08,10 | |||
|phase1_expression=1.28119077683835,0,0,0.30246421130683,2.00358291978539,0.16787927191189,0.934450562382103,0.903863264091034,0.703943610758334,0.936258105287974,1.71217968225505,0.717949430958028,0.171200729931206,0.524522414513984,1.99865857089398,1.61980213911861,4.89693314689703,3.94327706697797,3.15363197293199,2.54633791078818,1.9559956734746,1.68794617041505,1.30599894569468,0.159992422793407,0.68822784320151,0,0,0.215471232685889,0.380046838912748,0,0.221730510655305,0.635030673459631,1.84519436275371,0,1.44425809875637,0.498703936075477,0.408338712524738,1.67412652294763,0,1.57057123192139,0.588231488031014,1.36609096991689,1.94204141212461,0.251793635951155,0.405507724878058,0,0,0.218025156380447,0,0,0.139986421625363,0,1.51004345451963,0.725362142011344,0.672187598284928,0.514518872071894,0,0,1.61853168687678,0,0,0.677689064138264,0,0,0.988866362566974,0,0,0.384218305321555,1.34796496001021,0.945041568321835,0.630974884054146,0.285650984403804,0,1.5923803897944,1.34183659425531,0.919218786610021,0,1.0214987046815,1.53606533256243,0.527545150920775,0.823388792421687,2.08365348222704,0,0,1.37518422999129,0.589257170947335,0.854230084794618,1.4911955666024,0.454357159999104,0.68014404096107,0.579728977403356,0,0,0,0,0.448026887097336,0.702222100658759,0.511290967734173,0.259786004602869,0,0.845060518660083,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,0.68510327831436,2.84831672011889,0.445326417194474,0.520455980298408,0.608930956624282,1.38369298353635,0.452167921657868,1.88141931417128,0.251333182659351,0.494389935468748,0.722996784599558,0,3.23533699894818,2.65009822152472,2.42437626567611,0,2.04946557908083,1.25668024088073,0.255457055208591,2.99537811264801,2.39961092397363,2.79554499560742,4.19413790333504,10.0650132620098,4.90051973240171,9.38651329038293,5.8814555185976,3.74018480207208,4.2182728397617,1.42575109390443,2.61254638281195,2.77995034277042,2.31486041475121,2.21204753036596,1.14951052216736,1.80062129805349,1.65775299619287,3.19771546011241,2.0498195245576,2.99845518591132,3.3631438196072,2.15567992932842,1.89106080167819,1.93546236580344,0.657587197282725,0.278047249225598,0.696504333044333,2.67516777330327,1.79130840136644,3.51106593656617,2.05878325691772,1.42081749697796,1.65700618028402,0.703578179943289,1.44049649168812,0.946978942340841,0.787056926989615,1.85120535464854,1.39520366850245,1.07309360559848,1.98501082024188,0.987359099480883,0.656669856316381,1.05389452409612,0.877199924551994,1.53685080703735,1.47627060636409,3.57492912559016,1.23485534855141,1.32167513193519,0.264450566663544,1.70630600428187,1.39342003116263,0.77320476793256,1.00841762311671,1.33426826306922,1.14135375667535,0.474529061544512,0.494096864172033,1.25667604400135,0.994782360205754,0.779856348476481,0,0,0.796565093017469,0.189667900953082,0.913988100877831,2.25415471346161,1.83286195060783,2.13347735884388,1.68325967736765,1.64414996523069,0.738050739898011,0.941992367048249,1.48076596706161,0,1.50160595144485,1.76903095601883,1.57403478669398,2.02860121388503,1.4470629585145,1.52775511068852,1.72617682470486,0.972811360650212,0.274561413188081,4.31304619582064,1.11642284300551,0.312037673114561,0.757736633841335,1.07638448113147,0,0.923765950833023,1.32643988239339,1.30371981153621,1.01847051465113,2.34690248288502,1.84256883185997,1.42826184531608,0.780534591431195,1.7339865851681,1.7717175171902,1.11618338060241,0.491589944147214,1.03610989119537,1.01254341007058,0,1.08781136763742,0,0.551873492609465,1.9266070798535,3.39913891117389,0.327869890753351,0.252470927204373,0,0,0.430846795465598,0.477937595905104,0.445597348164788,1.41538265394416,0,0.584511715822624,0,4.17717711348349,0.709700426041343,0.534196811001766,2.44330439030364,0.824850614862677,0,0.242780636154981,1.81394134178851,0.188605079755898,0,0.922305443831782,0.775284879504663,1.45413491791002,1.06949213515416,0.948110273807448,1.05418608574999,0,2.04263763452273,0.900305470156551,0,1.50035924522115,1.24138163549592,1.42695054081656,1.15184314421485,0.304464949114599,0,0.63549621259146,0,1.6488625294148,1.13025098687134,1.80938774784468,2.14870219205646,1.96969079694074,0,4.07935664423121,2.22132145037209,1.44470807574256,1.29636169158798,3.57900068308913,2.46049609897845,1.60144721244566,2.37969801991397,2.6590775941495,4.14599921413271,0.954670618015114,1.73984796469624,0.609958401380546,0.86404272657441,1.46361807210128,1.52853794622324,0.944050424693745,0.909188012978695,0.523511883968059,0.777689839750757,1.86401793926078,4.50954350947352,1.94371509857172,1.15820943319968,1.75006069509643,0.387479470433193,0.844780627453891,1.87771581833206,1.8228613878153,3.67007705489988,5.55643477899814,3.16833006883652,1.58005560314089,0.608175645870493,1.84879722896689,2.07873316764472,3.93858730468459,1.19208812868759,4.44723163223885,2.51072196196781,5.25025539730368,4.11516755936999,4.03304740547362,4.0932309910696,2.98256709085021,3.74006086981021,2.72076460338254,1.10992976687032,0.897138566094757,0.6715384654563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| |||
|short_description=p2@Zfp280d | |||
}} | |||
Revision as of 18:41, 14 September 2013
| Short description: | p2@Zfp280d |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Zfp280d_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -12bp_to_ENSMUST00000043096, ENSMUST00000062088, ENSMUST00000098576, NM_146224, uc009qpn.1, uc009qpo.1, uc009qpp.1, uc009qpq.1, uc009qpr.1, uc009qps.1_5end |
| EntrezGene: | Zfp280d |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| occipital lobe | 4.05e-08 | 10 |
| visual cortex | 4.05e-08 | 10 |
| neocortex | 4.05e-08 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
