FFCP PHASE1:Mm9::chrX:149078407..149078424,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=110380|HGNC=|MCL_coexpression_id=237|UniProt=|association_with_transcript=42bp_to_ENSMUST00000124141_5end|description=CAGE_peak_10_at_Shroom2_5end|id=chrX:149078407..149078424,-|ontology_enrichment_celltype=CL:0000117!1.43e-21!23;CL:0000337!1.43e-21!23;CL:0000540!6.65e-20!33;CL:0000047!6.65e-20!33;CL:0000031!6.65e-20!33;CL:0000404!6.65e-20!33;CL:0000221!9.50e-16!44;CL:0000133!9.50e-16!44;CL:0000393!2.41e-15!39;CL:0000211!2.41e-15!39;CL:0002319!3.10e-15!43;CL:0000055!9.77e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.69e-28,23;CL:0000337,1.69e-28,23;CL:0000540,6.21e-21,33;CL:0000047,6.21e-21,33;CL:0000031,6.21e-21,33;CL:0000404,6.21e-21,33;CL:0000393,4.69e-17,39;CL:0000211,4.69e-17,39;CL:0002319,4.49e-15,43;CL:0000221,1.23e-14,44;CL:0000133,1.23e-14,44;CL:0002610,9.79e-09,3;CL:0002612,1.10e-08,3;CL:0000120,4.10e-08,3;CL:0002614,4.34e-08,3;CL:0002321,1.13e-07,70;CL:0002613,1.90e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.78e-30!73;UBERON:0005743!4.78e-30!73;UBERON:0000073!7.11e-30!75;UBERON:0001016!7.11e-30!75;UBERON:0001049!1.58e-23!52;UBERON:0005068!1.58e-23!52;UBERON:0006241!1.58e-23!52;UBERON:0007135!1.58e-23!52;UBERON:0004121!2.96e-23!102;UBERON:0000924!2.96e-23!102;UBERON:0006601!2.96e-23!102;UBERON:0002020!6.57e-23!34;UBERON:0000955!2.16e-21!50;UBERON:0006238!2.16e-21!50;UBERON:0002616!1.87e-20!49;UBERON:0000033!4.39e-19!63;UBERON:0002346!4.77e-18!71;UBERON:0003075!4.77e-18!71;UBERON:0007284!4.77e-18!71;UBERON:0002791!1.92e-17!29;UBERON:0003528!1.92e-17!29;UBERON:0001893!1.92e-17!29;UBERON:0003080!1.78e-15!40;UBERON:0002780!1.68e-14!39;UBERON:0001890!1.68e-14!39;UBERON:0006240!1.68e-14!39;UBERON:0003056!1.91e-14!49;UBERON:0007811!1.79e-10!86;UBERON:0000956!2.15e-10!21;UBERON:0001869!2.15e-10!21;UBERON:0000203!2.15e-10!21;UBERON:0003076!5.58e-09!12;UBERON:0003057!5.58e-09!12;UBERON:0002420!8.68e-09!8;UBERON:0007245!8.68e-09!8;UBERON:0010009!8.68e-09!8;UBERON:0010011!8.68e-09!8;UBERON:0000454!8.68e-09!8;UBERON:0000153!1.47e-08!94;UBERON:0002619!2.45e-08!17;UBERON:0002240!4.76e-08!6;UBERON:0005174!4.76e-08!6;UBERON:0001137!4.76e-08!6;UBERON:0002298!7.66e-08!6;UBERON:0001948!4.76e-07!5;UBERON:0002315!4.76e-07!5;UBERON:0002021!7.69e-07!10;UBERON:0000411!7.69e-07!10;UBERON:0001950!7.69e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.67e-36,73;UBERON:0001016,9.21e-35,75;UBERON:0000073,1.68e-33,54;UBERON:0001049,1.77e-29,52;UBERON:0005068,1.77e-29,52;UBERON:0006241,1.77e-29,52;UBERON:0007135,1.77e-29,52;UBERON:0004121,5.41e-26,95;UBERON:0000924,5.41e-26,95;UBERON:0006601,5.41e-26,95;UBERON:0002020,5.04e-25,34;UBERON:0002346,8.24e-23,64;UBERON:0003075,8.24e-23,64;UBERON:0007284,8.24e-23,64;UBERON:0000955,2.22e-20,47;UBERON:0006238,2.22e-20,47;UBERON:0010371,3.02e-19,73;UBERON:0002616,7.62e-19,46;UBERON:0003076,3.23e-16,12;UBERON:0003057,3.23e-16,12;UBERON:0003080,8.50e-16,40;UBERON:0002240,1.07e-15,6;UBERON:0005174,1.07e-15,6;UBERON:0001137,1.07e-15,6;UBERON:0003528,1.28e-15,29;UBERON:0002791,1.28e-15,29;UBERON:0001893,1.28e-15,29;UBERON:0002780,3.34e-14,39;UBERON:0001890,3.34e-14,39;UBERON:0006240,3.34e-14,39;UBERON:0010314,5.16e-14,92;UBERON:0002420,9.22e-14,8;UBERON:0007245,9.22e-14,8;UBERON:0010009,9.22e-14,8;UBERON:0010011,9.22e-14,8;UBERON:0000454,9.22e-14,8;UBERON:0001948,1.59e-13,5;UBERON:0002315,1.59e-13,5;UBERON:0003056,3.87e-12,49;UBERON:0002950,1.48e-10,4;UBERON:0001891,1.48e-10,4;UBERON:0009616,1.48e-10,4;UBERON:0010286,1.48e-10,4;UBERON:0000025,3.86e-10,114;UBERON:0011216,4.24e-09,194;UBERON:0004111,4.43e-09,122;UBERON:0004684,9.79e-09,3;UBERON:0002275,9.79e-09,3;UBERON:0002257,1.10e-08,3;UBERON:0002021,1.14e-08,10;UBERON:0000411,1.14e-08,10;UBERON:0001950,1.14e-08,10;UBERON:0002038,4.34e-08,3;UBERON:0009663,4.34e-08,3;UBERON:0009661,4.34e-08,3;UBERON:0000125,4.34e-08,3;UBERON:0002308,4.34e-08,3;UBERON:0000369,1.59e-07,5;UBERON:0002435,1.59e-07,5;UBERON:0000204,1.59e-07,5;UBERON:0010082,1.59e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,2.11596391708813,2.53532561402472,0.338844532069132,0,0,0,0,0,0.768436610643109,0.103689612308478,0.270011876663381,0.210324961351382,3.42781181284564,3.3130281142742,0.244981598429908,0.191690942036473,0.919218786610021,5.50579404996943,2.17068474744819,3.37934373163736,1.71452174049252,1.46380229763855,1.04182674111352,3.62937898701795,1.68828783009504,1.37518422999129,10.0173719061047,7.68807076315156,1.3047961207771,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,3.59497534571574,1.37250180845588,0.628271760564322,1.39059456153821,1.02286182932132,2.49345653471472,1.1356888414743,0,0,0,0,0,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0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| ||
|EntrezGene=110380 | |||
|HGNC= | |||
|MCL_coexpression_id=237 | |||
|UniProt= | |||
|association_with_transcript=42bp_to_ENSMUST00000124141_5end | |||
|description=CAGE_peak_10_at_Shroom2_5end | |||
|id=chrX:149078407..149078424,- | |||
|ontology_enrichment_celltype=CL:0000117!1.43e-21!23;CL:0000337!1.43e-21!23;CL:0000540!6.65e-20!33;CL:0000047!6.65e-20!33;CL:0000031!6.65e-20!33;CL:0000404!6.65e-20!33;CL:0000221!9.50e-16!44;CL:0000133!9.50e-16!44;CL:0000393!2.41e-15!39;CL:0000211!2.41e-15!39;CL:0002319!3.10e-15!43;CL:0000055!9.77e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.69e-28,23;CL:0000337,1.69e-28,23;CL:0000540,6.21e-21,33;CL:0000047,6.21e-21,33;CL:0000031,6.21e-21,33;CL:0000404,6.21e-21,33;CL:0000393,4.69e-17,39;CL:0000211,4.69e-17,39;CL:0002319,4.49e-15,43;CL:0000221,1.23e-14,44;CL:0000133,1.23e-14,44;CL:0002610,9.79e-09,3;CL:0002612,1.10e-08,3;CL:0000120,4.10e-08,3;CL:0002614,4.34e-08,3;CL:0002321,1.13e-07,70;CL:0002613,1.90e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.78e-30!73;UBERON:0005743!4.78e-30!73;UBERON:0000073!7.11e-30!75;UBERON:0001016!7.11e-30!75;UBERON:0001049!1.58e-23!52;UBERON:0005068!1.58e-23!52;UBERON:0006241!1.58e-23!52;UBERON:0007135!1.58e-23!52;UBERON:0004121!2.96e-23!102;UBERON:0000924!2.96e-23!102;UBERON:0006601!2.96e-23!102;UBERON:0002020!6.57e-23!34;UBERON:0000955!2.16e-21!50;UBERON:0006238!2.16e-21!50;UBERON:0002616!1.87e-20!49;UBERON:0000033!4.39e-19!63;UBERON:0002346!4.77e-18!71;UBERON:0003075!4.77e-18!71;UBERON:0007284!4.77e-18!71;UBERON:0002791!1.92e-17!29;UBERON:0003528!1.92e-17!29;UBERON:0001893!1.92e-17!29;UBERON:0003080!1.78e-15!40;UBERON:0002780!1.68e-14!39;UBERON:0001890!1.68e-14!39;UBERON:0006240!1.68e-14!39;UBERON:0003056!1.91e-14!49;UBERON:0007811!1.79e-10!86;UBERON:0000956!2.15e-10!21;UBERON:0001869!2.15e-10!21;UBERON:0000203!2.15e-10!21;UBERON:0003076!5.58e-09!12;UBERON:0003057!5.58e-09!12;UBERON:0002420!8.68e-09!8;UBERON:0007245!8.68e-09!8;UBERON:0010009!8.68e-09!8;UBERON:0010011!8.68e-09!8;UBERON:0000454!8.68e-09!8;UBERON:0000153!1.47e-08!94;UBERON:0002619!2.45e-08!17;UBERON:0002240!4.76e-08!6;UBERON:0005174!4.76e-08!6;UBERON:0001137!4.76e-08!6;UBERON:0002298!7.66e-08!6;UBERON:0001948!4.76e-07!5;UBERON:0002315!4.76e-07!5;UBERON:0002021!7.69e-07!10;UBERON:0000411!7.69e-07!10;UBERON:0001950!7.69e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.67e-36,73;UBERON:0001016,9.21e-35,75;UBERON:0000073,1.68e-33,54;UBERON:0001049,1.77e-29,52;UBERON:0005068,1.77e-29,52;UBERON:0006241,1.77e-29,52;UBERON:0007135,1.77e-29,52;UBERON:0004121,5.41e-26,95;UBERON:0000924,5.41e-26,95;UBERON:0006601,5.41e-26,95;UBERON:0002020,5.04e-25,34;UBERON:0002346,8.24e-23,64;UBERON:0003075,8.24e-23,64;UBERON:0007284,8.24e-23,64;UBERON:0000955,2.22e-20,47;UBERON:0006238,2.22e-20,47;UBERON:0010371,3.02e-19,73;UBERON:0002616,7.62e-19,46;UBERON:0003076,3.23e-16,12;UBERON:0003057,3.23e-16,12;UBERON:0003080,8.50e-16,40;UBERON:0002240,1.07e-15,6;UBERON:0005174,1.07e-15,6;UBERON:0001137,1.07e-15,6;UBERON:0003528,1.28e-15,29;UBERON:0002791,1.28e-15,29;UBERON:0001893,1.28e-15,29;UBERON:0002780,3.34e-14,39;UBERON:0001890,3.34e-14,39;UBERON:0006240,3.34e-14,39;UBERON:0010314,5.16e-14,92;UBERON:0002420,9.22e-14,8;UBERON:0007245,9.22e-14,8;UBERON:0010009,9.22e-14,8;UBERON:0010011,9.22e-14,8;UBERON:0000454,9.22e-14,8;UBERON:0001948,1.59e-13,5;UBERON:0002315,1.59e-13,5;UBERON:0003056,3.87e-12,49;UBERON:0002950,1.48e-10,4;UBERON:0001891,1.48e-10,4;UBERON:0009616,1.48e-10,4;UBERON:0010286,1.48e-10,4;UBERON:0000025,3.86e-10,114;UBERON:0011216,4.24e-09,194;UBERON:0004111,4.43e-09,122;UBERON:0004684,9.79e-09,3;UBERON:0002275,9.79e-09,3;UBERON:0002257,1.10e-08,3;UBERON:0002021,1.14e-08,10;UBERON:0000411,1.14e-08,10;UBERON:0001950,1.14e-08,10;UBERON:0002038,4.34e-08,3;UBERON:0009663,4.34e-08,3;UBERON:0009661,4.34e-08,3;UBERON:0000125,4.34e-08,3;UBERON:0002308,4.34e-08,3;UBERON:0000369,1.59e-07,5;UBERON:0002435,1.59e-07,5;UBERON:0000204,1.59e-07,5;UBERON:0010082,1.59e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,2.11596391708813,2.53532561402472,0.338844532069132,0,0,0,0,0,0.768436610643109,0.103689612308478,0.270011876663381,0.210324961351382,3.42781181284564,3.3130281142742,0.244981598429908,0.191690942036473,0.919218786610021,5.50579404996943,2.17068474744819,3.37934373163736,1.71452174049252,1.46380229763855,1.04182674111352,3.62937898701795,1.68828783009504,1.37518422999129,10.0173719061047,7.68807076315156,1.3047961207771,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,3.59497534571574,1.37250180845588,0.628271760564322,1.39059456153821,1.02286182932132,2.49345653471472,1.1356888414743,0,0,0,0,0,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.720332286654991,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,2.81308047821288,0,0,0.315508219416257,0,0,0.955875191810208,0.668396022247182,0.566153061577665,0,1.16902343164525,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,2.76195141904306,2.29158205375759,2.92150409984269,0.685082519770642,2.2661816921691,0,0,0.906284817968409,1.03552062350364,0,0,0,0.486213434136588,0.419226325255965,1.10306105070008,0.222246727801615,0.618105171716683,0,0,0.50695859978048,0.565879024158229,0.37456602987953,0.576226371643824,0.402048282689293,0.952587382566147,0.579421629724277,0.192909220463705,0.824171801606613,0.588795680537589,0,0.354951612318675,0,0.436039249896986,0.188218760830661,0.169229215783353,0.914639864363863,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.394017929502254,0,0.619747364743864,0.385813221962283,0.749431733813838,0,0.214871054048298,0.765153328275374,0.220591419119515,0.463735671240843 | |||
|short_description=p10@Shroom2 | |||
}} |
Revision as of 19:30, 14 September 2013
Short description: | p10@Shroom2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Shroom2_5end |
Coexpression cluster: | MCL_coexpression_mm9:237 |
Association with transcript: | 42bp_to_ENSMUST00000124141_5end |
EntrezGene: | Shroom2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.69e-28 | 23 |
neuroblast (sensu Vertebrata) | 1.69e-28 | 23 |
neuron | 6.21e-21 | 33 |
neuronal stem cell | 6.21e-21 | 33 |
neuroblast | 6.21e-21 | 33 |
electrically signaling cell | 6.21e-21 | 33 |
electrically responsive cell | 4.69e-17 | 39 |
electrically active cell | 4.69e-17 | 39 |
neural cell | 4.49e-15 | 43 |
ectodermal cell | 1.23e-14 | 44 |
neurectodermal cell | 1.23e-14 | 44 |
raphe nuclei neuron | 9.79e-09 | 3 |
neuron of the ventral spinal cord | 1.10e-08 | 3 |
granule cell | 4.10e-08 | 3 |
neuron of the substantia nigra | 4.34e-08 | 3 |
embryonic cell | 1.13e-07 | 70 |
striatum neuron | 1.90e-07 | 3 |
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