FFCP PHASE1:Mm9::chrX:35918168..35918201,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72584|HGNC=|UniProt=|association_with_transcript=-329bp_to_ENSMUST00000147129,uc009tab.1_5end|description=CAGE_peak_1_at_Cul4b_5end|id=chrX:35918168..35918201,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.80e-12!193;UBERON:0004120!1.80e-12!193;UBERON:0006603!1.80e-12!193;UBERON:0003104!1.08e-09!131;UBERON:0009142!1.08e-09!131;UBERON:0002530!1.73e-08!65;UBERON:0002368!2.50e-08!60;UBERON:0005057!4.46e-08!51;UBERON:0000949!2.68e-07!72;UBERON:0001048!2.98e-07!147;UBERON:0001041!5.88e-07!92;UBERON:0000077!7.72e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002530,1.73e-08,65;UBERON:0002368,2.50e-08,60;UBERON:0001041,1.21e-07,80;UBERON:0000949,2.68e-07,72;UBERON:0001048,3.40e-07,134|phase1_expression=18.0968197228417,12.2141392673776,7.73498706962211,7.25914107136392,5.00895729946347,12.4230661214798,13.5495331545405,18.8520052224701,27.7353782638783,29.2580657902492,20.8885921235116,21.6182550877362,12.6688540149092,16.5224560571905,12.9912807108108,11.5410902412201,9.09430441566591,20.0318475002481,19.1960207048034,16.9755860719212,8.33424243480484,23.6312463858107,19.3287843962812,17.9191513528615,13.7645568640302,12.0588712464154,9.90752591165872,14.6520438226405,12.1614988452079,14.1136872665561,11.7517170647311,3.81018404075779,11.0711661765223,0,11.8429164098023,11.9688944658114,12.2501613757421,14.2300754450549,22.6587249911902,15.7057123192139,12.3528612486513,11.6117732442936,16.9928623560904,23.0391176895306,24.8373481487811,23.8610777810186,3.9119567217402,8.72100625521786,3.73466510648602,7.97162586204562,7.27929392451885,2.87505128729943,24.160695272314,15.9579671242496,19.1573465511204,9.77585856936598,6.5902691185914,10.8291139378263,3.84401275633236,1.5869729378161,1.90149421051854,9.14880236586657,9.78224275722253,4.04954872776629,1.97773272513395,2.1314403448383,4.19440154725767,2.68952813725088,11.716926190858,4.99521971827255,9.88527318351495,2.28520787523043,2.20868540951614,6.1245399607477,6.22995561618536,6.43453150627015,1.10115880999389,5.87361755191863,4.30098293117482,1.97829431595291,3.93396867490361,3.64639359389732,1.3959149950069,6.19038871034848,4.27835093775068,6.18720029494702,6.40672563595963,6.71038004971082,10.0715837133135,14.9631689011435,14.4932244350839,17.2084775396277,26.5188820146023,11.873470216032,24.6915038630114,21.9533174677694,16.7128859956785,21.8150812899914,18.1850203222008,16.606960001986,9.43650912503759,11.5493829672886,5.09610479413291,7.11066703153331,12.3399893376392,17.7351905832569,14.1546844604139,17.5843174767352,32.6261733395436,16.6255195752604,20.2977832316379,15.5277393939192,16.6043158024362,24.2663451289722,21.7539108201054,15.9596570988688,30.6521759990624,25.7386855317443,17.6922110389975,13.426648545635,11.4837589599405,18.9101348722737,5.59175283654366,8.78342391034641,7.95897485891129,17.6265368093928,19.7694955434768,15.5974710058286,19.9500256504712,9.8861822007183,11.8950156732843,13.6963243803022,7.30062144807561,9.2057564638919,7.89594569326328,9.24775199486219,18.3310854930569,12.6895110022295,18.7014841240919,15.7831391914855,24.7228841629137,14.4838325793088,18.0062129805349,16.2761203262572,11.9063873514824,10.249097622788,12.5560310910037,9.8307280880826,34.0597428833891,36.6865795525569,25.8648152521005,28.2762494831572,27.8047249225598,20.5468778248078,19.3435208223467,38.0155449623322,19.6619692447706,16.4702660553418,17.0498099637356,25.4764700218667,20.8728193383176,19.6267646992506,19.6498130535725,16.9217239302767,14.5011086114136,11.1616293480196,10.9992094573844,9.34122738937356,9.87359099480883,8.86504306027114,7.70153690685629,5.70179950958796,9.87975518809728,8.32079796314305,7.99101804543684,12.0398396483763,8.92130714056255,16.1314845664762,30.2869315760032,32.7453707323218,29.2529137201152,31.4626298412414,28.4643896121434,19.7834651157062,10.4396393539793,25.8577358916697,18.5988054512199,16.5133871794155,19.8863368861503,15.2799299471218,11.4553166433588,12.1476176685164,12.7077493638565,25.4774183119695,31.5581659884625,20.7724354402221,19.3952487167626,16.4819176742249,15.5561881325673,18.5988786454299,13.3448918665169,19.3733547357227,24.3091154211462,30.6994994517613,24.3733153940372,26.3088671490279,18.2574109249653,16.6412240229168,15.786802810448,17.8371605219503,17.8348749452539,15.1008777253445,17.2521847832825,20.0956111740992,17.1620720213008,21.2166257475574,23.6804585848924,29.4290548031654,12.5632169313291,22.1704951771467,29.4966607360067,17.9929790921699,18.3058393665032,17.0856382590652,24.7565386521454,14.4398899414771,12.6108115284953,12.4020226203314,14.3509291791738,11.6342953448174,10.0157289482219,14.3202567995696,10.5553898757491,9.79030230873677,22.6211565588757,21.2471294654644,9.15138362930414,8.55645312123083,34.9181433652319,9.84636616097055,13.2513452154828,16.3984272604588,14.6487910458303,15.7719406648684,15.3731085116852,13.8707500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| ||
|EntrezGene=72584 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-329bp_to_ENSMUST00000147129,uc009tab.1_5end | |||
|description=CAGE_peak_1_at_Cul4b_5end | |||
|id=chrX:35918168..35918201,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.80e-12!193;UBERON:0004120!1.80e-12!193;UBERON:0006603!1.80e-12!193;UBERON:0003104!1.08e-09!131;UBERON:0009142!1.08e-09!131;UBERON:0002530!1.73e-08!65;UBERON:0002368!2.50e-08!60;UBERON:0005057!4.46e-08!51;UBERON:0000949!2.68e-07!72;UBERON:0001048!2.98e-07!147;UBERON:0001041!5.88e-07!92;UBERON:0000077!7.72e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002530,1.73e-08,65;UBERON:0002368,2.50e-08,60;UBERON:0001041,1.21e-07,80;UBERON:0000949,2.68e-07,72;UBERON:0001048,3.40e-07,134 | |||
|phase1_expression=18.0968197228417,12.2141392673776,7.73498706962211,7.25914107136392,5.00895729946347,12.4230661214798,13.5495331545405,18.8520052224701,27.7353782638783,29.2580657902492,20.8885921235116,21.6182550877362,12.6688540149092,16.5224560571905,12.9912807108108,11.5410902412201,9.09430441566591,20.0318475002481,19.1960207048034,16.9755860719212,8.33424243480484,23.6312463858107,19.3287843962812,17.9191513528615,13.7645568640302,12.0588712464154,9.90752591165872,14.6520438226405,12.1614988452079,14.1136872665561,11.7517170647311,3.81018404075779,11.0711661765223,0,11.8429164098023,11.9688944658114,12.2501613757421,14.2300754450549,22.6587249911902,15.7057123192139,12.3528612486513,11.6117732442936,16.9928623560904,23.0391176895306,24.8373481487811,23.8610777810186,3.9119567217402,8.72100625521786,3.73466510648602,7.97162586204562,7.27929392451885,2.87505128729943,24.160695272314,15.9579671242496,19.1573465511204,9.77585856936598,6.5902691185914,10.8291139378263,3.84401275633236,1.5869729378161,1.90149421051854,9.14880236586657,9.78224275722253,4.04954872776629,1.97773272513395,2.1314403448383,4.19440154725767,2.68952813725088,11.716926190858,4.99521971827255,9.88527318351495,2.28520787523043,2.20868540951614,6.1245399607477,6.22995561618536,6.43453150627015,1.10115880999389,5.87361755191863,4.30098293117482,1.97829431595291,3.93396867490361,3.64639359389732,1.3959149950069,6.19038871034848,4.27835093775068,6.18720029494702,6.40672563595963,6.71038004971082,10.0715837133135,14.9631689011435,14.4932244350839,17.2084775396277,26.5188820146023,11.873470216032,24.6915038630114,21.9533174677694,16.7128859956785,21.8150812899914,18.1850203222008,16.606960001986,9.43650912503759,11.5493829672886,5.09610479413291,7.11066703153331,12.3399893376392,17.7351905832569,14.1546844604139,17.5843174767352,32.6261733395436,16.6255195752604,20.2977832316379,15.5277393939192,16.6043158024362,24.2663451289722,21.7539108201054,15.9596570988688,30.6521759990624,25.7386855317443,17.6922110389975,13.426648545635,11.4837589599405,18.9101348722737,5.59175283654366,8.78342391034641,7.95897485891129,17.6265368093928,19.7694955434768,15.5974710058286,19.9500256504712,9.8861822007183,11.8950156732843,13.6963243803022,7.30062144807561,9.2057564638919,7.89594569326328,9.24775199486219,18.3310854930569,12.6895110022295,18.7014841240919,15.7831391914855,24.7228841629137,14.4838325793088,18.0062129805349,16.2761203262572,11.9063873514824,10.249097622788,12.5560310910037,9.8307280880826,34.0597428833891,36.6865795525569,25.8648152521005,28.2762494831572,27.8047249225598,20.5468778248078,19.3435208223467,38.0155449623322,19.6619692447706,16.4702660553418,17.0498099637356,25.4764700218667,20.8728193383176,19.6267646992506,19.6498130535725,16.9217239302767,14.5011086114136,11.1616293480196,10.9992094573844,9.34122738937356,9.87359099480883,8.86504306027114,7.70153690685629,5.70179950958796,9.87975518809728,8.32079796314305,7.99101804543684,12.0398396483763,8.92130714056255,16.1314845664762,30.2869315760032,32.7453707323218,29.2529137201152,31.4626298412414,28.4643896121434,19.7834651157062,10.4396393539793,25.8577358916697,18.5988054512199,16.5133871794155,19.8863368861503,15.2799299471218,11.4553166433588,12.1476176685164,12.7077493638565,25.4774183119695,31.5581659884625,20.7724354402221,19.3952487167626,16.4819176742249,15.5561881325673,18.5988786454299,13.3448918665169,19.3733547357227,24.3091154211462,30.6994994517613,24.3733153940372,26.3088671490279,18.2574109249653,16.6412240229168,15.786802810448,17.8371605219503,17.8348749452539,15.1008777253445,17.2521847832825,20.0956111740992,17.1620720213008,21.2166257475574,23.6804585848924,29.4290548031654,12.5632169313291,22.1704951771467,29.4966607360067,17.9929790921699,18.3058393665032,17.0856382590652,24.7565386521454,14.4398899414771,12.6108115284953,12.4020226203314,14.3509291791738,11.6342953448174,10.0157289482219,14.3202567995696,10.5553898757491,9.79030230873677,22.6211565588757,21.2471294654644,9.15138362930414,8.55645312123083,34.9181433652319,9.84636616097055,13.2513452154828,16.3984272604588,14.6487910458303,15.7719406648684,15.3731085116852,13.8707500086528,15.382806663646,16.3663280430335,17.392662229647,10.9249247583414,24.9814549966553,15.6697731227185,25.2474786998043,21.7760562323747,11.9470624505967,23.7925023431882,15.7208249621671,16.4086419387631,10.0402643579463,19.6758494684114,16.7978390559344,16.7225515559653,15.6858846489277,13.5895805912401,8.4334886859999,9.28219889233682,11.234506989875,23.4079422240703,10.4780533864031,15.4322665222746,20.9261475697883,10.3453914209201,17.4421961838248,9.43841342255258,15.4883327322049,10.1679394014634,12.5701186891328,14.1802177529673,25.1884505645613,25.3314284698255,20.1739261365301,16.2499490747611,15.4484843413821,8.34413859047294,14.1822831062218,17.9556575128004,20.7417870654077,10.7370020492674,15.4464477324758,13.2691340459783,16.6578861393978,17.4939315404573,16.7221968303353,12.4107180341965,31.7917673549041,2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| |||
|short_description=p1@Cul4b | |||
}} | |||
Revision as of 19:47, 14 September 2013
| Short description: | p1@Cul4b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Cul4b_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -329bp_to_ENSMUST00000147129, uc009tab.1_5end |
| EntrezGene: | Cul4b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gland | 1.73e-08 | 65 |
| endocrine gland | 2.50e-08 | 60 |
| foregut | 1.21e-07 | 80 |
| endocrine system | 2.68e-07 | 72 |
| primordium | 3.40e-07 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
