FFCP PHASE1:Hg19::chr1:28477178..28477206,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=5724 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9582 | |||
|TSSclassifier=not | |||
|UniProt=P25105 | |||
|association_with_transcript=325bp_to_AB464653,AY275466,BT009801,CU687620,DQ891716,DQ894893,EU832802,GQ129382,L07334_5end | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_9_at_PTAFR_5end | |||
|id=chr1:28477178..28477206,- | |||
|ontology_enrichment_celltype=CL:0000766!2.70e-56!76;CL:0002057!3.24e-49!42;CL:0002194!4.91e-47!63;CL:0000576!4.91e-47!63;CL:0000040!4.91e-47!63;CL:0000559!4.91e-47!63;CL:0000839!3.87e-46!70;CL:0000557!3.11e-45!71;CL:0002009!4.64e-45!65;CL:0000860!6.14e-45!45;CL:0000763!9.23e-40!112;CL:0000049!9.23e-40!112;CL:0000738!1.45e-34!140;CL:0002087!7.44e-30!119;CL:0002032!8.31e-30!165;CL:0000837!8.31e-30!165;CL:0000037!8.67e-30!172;CL:0000566!8.67e-30!172;CL:0002031!7.13e-29!124;CL:0000988!7.68e-27!182;CL:0000094!2.70e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.50e-78;33!CL:0002057;3.50e-78;33!CL:0000473;2.96e-73;39!CL:0000234;2.96e-73;39!CL:0000576;2.86e-51;48!CL:0000766;8.14e-36;69!CL:0000763;1.30e-19;100!CL:0000775;2.48e-13;3!CL:0000094;7.16e-13;8!CL:0000738;1.64e-12;136!CL:0002087;5.64e-11;104!CL:0000235;8.35e-11;6!CL:0000081;2.82e-09;11!CL:0000771;3.67e-09;2!CL:0000988;3.42e-07;177!CL:0000219;4.47e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.23e-86,72;CL:0000473,5.88e-86,48;CL:0000234,5.88e-86,48;CL:0002194,2.04e-80,59;CL:0000576,2.04e-80,59;CL:0000040,2.04e-80,59;CL:0000559,2.04e-80,59;CL:0002009,1.48e-77,61;CL:0000860,3.29e-76,42;CL:0002057,3.29e-76,42;CL:0000839,3.79e-71,66;CL:0000557,5.59e-70,67;CL:0000763,1.18e-54,108;CL:0000049,1.18e-54,108;CL:0000738,6.08e-44,136;CL:0002087,6.62e-40,115;CL:0002031,6.61e-38,120;CL:0002032,9.31e-36,161;CL:0000837,9.31e-36,161;CL:0000037,6.72e-34,168;CL:0000988,1.01e-31,177;CL:0000775,1.98e-13,3;CL:0000094,5.51e-13,8;CL:0000134,2.48e-11,354;CL:0002320,6.17e-11,361;CL:0000235,9.90e-11,6;CL:0000219,1.53e-09,386;CL:0000081,2.34e-09,11;CL:0000771,2.99e-09,2;CL:0000048,7.72e-08,427;CL:0000723,1.32e-07,433;CL:0000034,2.66e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.63e-58;42!CL:0000049;1.46e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.21e-44!102;UBERON:0003061!2.21e-44!102;UBERON:0002193!5.16e-40!112;UBERON:0002371!4.00e-38!80;UBERON:0001474!3.18e-34!86;UBERON:0004765!3.99e-29!101;UBERON:0001434!3.99e-29!101;UBERON:0002405!2.63e-25!115;UBERON:0003081!3.04e-14!216;UBERON:0002204!4.35e-11!167;UBERON:0000178!1.31e-08!15;UBERON:0000179!1.31e-08!15;UBERON:0000463!1.31e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.84e-12;15!UBERON:0000179;2.84e-12;15!UBERON:0000463;2.84e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.91e-67,98;UBERON:0003061,1.91e-67,98;UBERON:0002371,7.92e-61,76;UBERON:0002193,2.01e-60,108;UBERON:0001474,7.90e-56,82;UBERON:0004765,3.45e-50,90;UBERON:0002405,2.55e-48,93;UBERON:0001434,2.15e-44,100;UBERON:0003081,5.21e-28,203;UBERON:0002204,2.30e-23,167;UBERON:0000926,8.60e-15,315;UBERON:0004120,8.60e-15,315;UBERON:0006603,8.60e-15,315;UBERON:0000178,2.85e-12,15;UBERON:0000179,2.85e-12,15;UBERON:0000463,2.85e-12,15;UBERON:0002384,2.14e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.492603536699674,1.10195093839151,0.786728553697808,0,0.309632246632152,0,0,0,0,0.142169232487422,0,0,0.601633342410425,0.868043482863407,1.56740831967947,0.32389366601898,1.54545340580512,3.63495596948912,1.51150377475524,3.15359279544161,3.25400651667958,1.23350366406548,2.78735733805593,5.17846306179871,4.09857130446561,5.20260905754887,1.37898272294647,2.5819387343353,5.41705946377367,4.1413314699373,0.272906150057846,3.14612878223118,2.44867113896722,0.641858054152187,0.639337125799041,6.59702600373432,7.97854630486527,5.96714650745772,7.2552309657146,3.97169657283798,8.71951148593805,6.28121663141858,4.69334626578181,4.99534342821768,1.81619850790011,2.57794345191295,4.43047342417238,1.05627643155971,0.212604299965044,1.04829322754188,0.44931452458598,0.750884464207532,0.803627933485401,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.97364218096405,0.174129737299267,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0,1.18904929830983,0.93733833986777,0,0,0,0.581267877027924,0,0,0.528290604079356,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00902836572851,4.21667878966063,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,5.24304916763028,11.966458368161,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0.0941438007767792,0.43050537267123,0,0,0.459446800413919,3.04468565539302,1.52927441428475,1.70894156152249,0.476463550915578,2.05681136543097,0,2.16012574895246,6.34500141035416,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0.321176150207399,0.403599414382095,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.552567831062295,0,0,0,0,0,0.179021174675609,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.364909578431332,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.694238953340524,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0.160753148465019,0,0.415440338029185,0,0,0.0607495566580247,0.335434687599266,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,0.252071696221718,0,0,0,0.196295437002051,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0.352894871715692,0.0802413666891683,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0.202117188958219,0.653150243690884,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p9@PTAFR | |||
}} |
Revision as of 17:24, 10 January 2014
Short description: | p9@PTAFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_PTAFR_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 325bp_to_AB464653, AY275466, BT009801, CU687620, DQ891716, DQ894893, EU832802, GQ129382, L07334_5end |
EntrezGene: | PTAFR |
HGNC: | 9582 |
UniProt: | P25105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.91e-67 | 98 |
blood island | 1.91e-67 | 98 |
bone marrow | 7.92e-61 | 76 |
hemolymphoid system | 2.01e-60 | 108 |
bone element | 7.90e-56 | 82 |
skeletal element | 3.45e-50 | 90 |
immune system | 2.55e-48 | 93 |
skeletal system | 2.15e-44 | 100 |
lateral plate mesoderm | 5.21e-28 | 203 |
musculoskeletal system | 2.30e-23 | 167 |
mesoderm | 8.60e-15 | 315 |
mesoderm-derived structure | 8.60e-15 | 315 |
presumptive mesoderm | 8.60e-15 | 315 |
blood | 2.85e-12 | 15 |
haemolymphatic fluid | 2.85e-12 | 15 |
organism substance | 2.85e-12 | 15 |
connective tissue | 2.14e-10 | 371 |