FFCP PHASE1:Hg19::chr1:144994971..144994982,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15580 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VU43 | |||
|association_with_transcript=39bp_to_ENST00000369356,NM_001002812,NM_014644,uc001elk.1,uc001elw.3,uc001emc.1,uc001emd.1,uc001emg.1_5end | |||
|description=CAGE_peak_16_at_PDE4DIP_5end | |||
|id=chr1:144994971..144994982,- | |||
|ontology_enrichment_celltype=CL:0000188!3.65e-09!9;CL:0002541!9.29e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.69e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.54e-12;4!UBERON:0007284;2.54e-12;4!UBERON:0010227;7.90e-07;1 | |||
|ontology_enrichment_disease=DOID:1036!4.93e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:114;2.26e-11;2!DOID:1036;4.85e-11;8 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.32e-11,2;DOID:1036,4.85e-11,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.53e-18!115;UBERON:0004151!1.96e-07!3;UBERON:0003978!2.26e-07!3;UBERON:0009751!2.26e-07!3;UBERON:0000946!2.26e-07!3;UBERON:0002523!2.26e-07!3;UBERON:0005983!2.26e-07!3;UBERON:0002165!2.26e-07!3;UBERON:0002062!2.26e-07!3;UBERON:0007280!2.26e-07!3;UBERON:0000476!9.29e-07!3;UBERON:0000920!9.29e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.98e-16;3!UBERON:0003978;2.92e-16;3!UBERON:0000946;2.92e-16;3!UBERON:0007100;1.57e-15;25!UBERON:0002081;1.49e-11;2!UBERON:0002133;2.78e-11;2!UBERON:0005090;3.00e-11;2!UBERON:0001630;3.00e-11;2!UBERON:0000341;3.88e-11;2!UBERON:0000948;4.60e-08;22!UBERON:0001723;6.80e-08;3!UBERON:0001033;6.80e-08;3!UBERON:0001134;8.53e-08;16!UBERON:0002036;8.53e-08;16!UBERON:0003124;1.58e-07;3!UBERON:0000920;1.58e-07;3!UBERON:0002079;7.90e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.93e-16,3;UBERON:0003978,2.78e-16,3;UBERON:0009751,2.78e-16,3;UBERON:0000946,2.78e-16,3;UBERON:0002523,2.78e-16,3;UBERON:0005983,2.78e-16,3;UBERON:0002165,2.78e-16,3;UBERON:0002062,2.78e-16,3;UBERON:0007280,2.78e-16,3;UBERON:0007100,2.93e-14,27;UBERON:0002081,1.45e-11,2;UBERON:0010227,1.45e-11,2;UBERON:0002133,2.71e-11,2;UBERON:0005090,3.00e-11,2;UBERON:0001630,3.00e-11,2;UBERON:0000341,4.08e-11,2;UBERON:0003103,1.31e-08,68;UBERON:0001723,6.80e-08,3;UBERON:0001033,6.80e-08,3;UBERON:0010056,6.80e-08,3;UBERON:0000920,1.69e-07,3;UBERON:0000948,2.43e-07,24;UBERON:0005498,2.43e-07,24;UBERON:0004140,2.43e-07,24;UBERON:0009881,2.43e-07,24;UBERON:0004141,2.43e-07,24;UBERON:0003084,2.43e-07,24;UBERON:0007005,2.43e-07,24;UBERON:0004139,2.43e-07,24;UBERON:0004291,2.43e-07,24;UBERON:0004797,3.10e-07,7;UBERON:0007023,6.61e-07,114;UBERON:0003124,7.32e-07,7;UBERON:0002079,7.90e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.551346289938122,0.322260734604821,0.290033387828457,0.767039646744908,2.49289699810865,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1557318105882,0,0.66614393599564,0,0,0.73254089635947,0,2.563197838382,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,1.6156375993759,5.75831071186643,2.23300811812344,0.549585560411174,4.26427820814908,0,0,0,23.687544364804,24.115691721082,23.8306653505697,21.8216792632813,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0.067401132980677,8.02577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0.581934098930517,0,1.80784592624426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,12.0091432547069,19.7077964650048,5.74298419661451,5.59101201397175,18.8859461180091,31.6903469567459,19.2144731312037,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0.236417121897595,0.891727998294968,0,0,0,28.5878130549347,13.2418394073086,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0.427149650270779,1.10043013569766,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.202612753855184,0,0.206686796501184,0.126831620387814,0,0,1.98484471355718,0,0,0,0,0,0.455324382702595,2.66107110487917,0,0,0.339848664884159,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,1.04314963381548,0,0.414432328326074,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,8.41657488344263,17.452677165562,11.598144313382,3.39997695141398,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0.252332849670158,0,0,0.101988829741982,0,0,0,0,0,0.829169439458779,0,11.301401040752,3.09483760902862,0,0.0620747142958579,0.560659312903067,1.40023748211963,1.0105859447911,10.6681206469511,15.4004985488376,0.673520530145875,0.215166616178029,5.32256570473621,0,0,0,0,4.69281884806909,0,0,0,0.201273793591026,0 | |||
|short_description=p16@PDE4DIP | |||
}} |
Revision as of 20:28, 10 January 2014
Short description: | p16@PDE4DIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PDE4DIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000369356, NM_001002812, NM_014644, uc001elk.1, uc001elw.3, uc001emc.1, uc001emd.1, uc001emg.1_5end |
EntrezGene: | PDE4DIP |
HGNC: | 15580 |
UniProt: | Q5VU43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.93e-16 | 3 |
valve | 2.78e-16 | 3 |
cardiac mesenchyme | 2.78e-16 | 3 |
cardial valve | 2.78e-16 | 3 |
tunica intima | 2.78e-16 | 3 |
heart layer | 2.78e-16 | 3 |
endocardium | 2.78e-16 | 3 |
endocardial cushion | 2.78e-16 | 3 |
presumptive endocardium | 2.78e-16 | 3 |
primary circulatory organ | 2.93e-14 | 27 |
cardiac atrium | 1.45e-11 | 2 |
future cardiac atrium | 1.45e-11 | 2 |
atrioventricular valve | 2.71e-11 | 2 |
muscle structure | 3.00e-11 | 2 |
muscle organ | 3.00e-11 | 2 |
throat | 4.08e-11 | 2 |
compound organ | 1.31e-08 | 68 |
tongue | 6.80e-08 | 3 |
gustatory system | 6.80e-08 | 3 |
future tongue | 6.80e-08 | 3 |
egg chorion | 1.69e-07 | 3 |
heart | 2.43e-07 | 24 |
primitive heart tube | 2.43e-07 | 24 |
primary heart field | 2.43e-07 | 24 |
anterior lateral plate mesoderm | 2.43e-07 | 24 |
heart tube | 2.43e-07 | 24 |
heart primordium | 2.43e-07 | 24 |
cardiac mesoderm | 2.43e-07 | 24 |
cardiogenic plate | 2.43e-07 | 24 |
heart rudiment | 2.43e-07 | 24 |
blood vessel layer | 3.10e-07 | 7 |
adult organism | 6.61e-07 | 114 |
chorion | 7.32e-07 | 7 |
left cardiac atrium | 7.90e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.32e-11 | 2 |
chronic leukemia | 4.85e-11 | 8 |