FFCP PHASE1:Hg19::chr1:155278605..155278621,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3631 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000467076_5end | |||
|coexpression_cluster_id=C2530 | |||
|description=CAGE_peak_2_at_FDPS_5end | |||
|id=chr1:155278605..155278621,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.23e-14!679;CL:0000004!3.23e-14!679;CL:0000255!3.23e-14!679;CL:0000012!5.05e-14!682;CL:0000222!3.26e-13!119;CL:0002371!7.00e-12!591;CL:0000003!2.01e-11!722;CL:0000220!2.45e-11!246;CL:0000066!2.77e-11!254;CL:0002321!1.04e-10!248;CL:0000144!1.67e-10!625;CL:0000183!7.74e-08!59;CL:0000680!8.22e-08!57;CL:0000056!8.22e-08!57;CL:0000355!8.22e-08!57;CL:0000187!2.12e-07!54;CL:0000055!8.39e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.12e-14,121;CL:0000066,1.94e-11,253;CL:0002321,2.67e-11,250;CL:0000680,2.65e-08,58;CL:0000056,2.65e-08,58;CL:0000355,2.65e-08,58;CL:0000187,7.21e-08,55;CL:0000115,6.19e-07,36;CL:0000192,7.21e-07,43;CL:0000514,7.21e-07,43;CL:0002078,7.43e-07,45;CL:0000213,8.56e-07,58;CL:0000215,8.56e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!9.65e-12!312;UBERON:0000483!2.07e-11!309;UBERON:0005256!6.97e-11!143;UBERON:0002100!4.41e-10!216;UBERON:0000914!1.85e-09!83;UBERON:0002329!1.85e-09!83;UBERON:0003077!1.85e-09!83;UBERON:0003059!1.85e-09!83;UBERON:0007282!1.85e-09!83;UBERON:0009618!1.85e-09!83;UBERON:0007285!1.85e-09!83;UBERON:0002049!1.89e-09!79;UBERON:0007798!1.89e-09!79;UBERON:0000486!5.45e-09!82;UBERON:0000475!5.80e-09!365;UBERON:0000490!1.74e-08!138;UBERON:0003104!3.54e-08!238;UBERON:0009142!3.54e-08!238;UBERON:0004290!7.75e-08!70;UBERON:0001737!1.19e-07!9;UBERON:0000477!1.23e-07!286;UBERON:0003914!2.35e-07!118;UBERON:0000055!4.01e-07!69;UBERON:0000481!4.07e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.31e-08;9!UBERON:0001557;4.31e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,9.13e-12,309;UBERON:0000483,2.00e-11,306;UBERON:0002049,6.17e-11,78;UBERON:0007798,6.17e-11,78;UBERON:0002100,8.37e-10,199;UBERON:0000490,1.40e-09,148;UBERON:0007503,2.95e-09,78;UBERON:0000486,2.95e-09,83;UBERON:0003104,8.17e-09,160;UBERON:0009142,8.17e-09,160;UBERON:0003914,1.19e-08,117;UBERON:0005256,1.79e-08,122;UBERON:0000055,2.21e-08,68;UBERON:0003077,3.00e-08,72;UBERON:0007285,3.00e-08,72;UBERON:0002329,3.23e-08,71;UBERON:0003059,3.23e-08,71;UBERON:0007282,3.23e-08,71;UBERON:0004290,3.23e-08,71;UBERON:0009618,3.23e-08,71;UBERON:0007524,4.65e-08,73;UBERON:0001737,5.72e-08,9;UBERON:0004535,1.24e-07,109;UBERON:0001009,1.30e-07,112;UBERON:0001134,8.07e-07,62;UBERON:0002036,8.07e-07,62;UBERON:0003082,8.07e-07,62 | |||
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| |||
|short_description=p2@FDPS | |||
}} |
Revision as of 21:16, 10 January 2014
Short description: | p2@FDPS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FDPS_5end |
Coexpression cluster: | C2530_Retinal_Mallassezderived_Bronchial_Keratinocyte_small_Hep2_Tracheal |
Association with transcript: | 0bp_to_ENST00000467076_5end |
EntrezGene: | FDPS |
HGNC: | 3631 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.12e-14 | 121 |
epithelial cell | 1.94e-11 | 253 |
embryonic cell | 2.67e-11 | 250 |
muscle precursor cell | 2.65e-08 | 58 |
myoblast | 2.65e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.65e-08 | 58 |
muscle cell | 7.21e-08 | 55 |
endothelial cell | 6.19e-07 | 36 |
smooth muscle cell | 7.21e-07 | 43 |
smooth muscle myoblast | 7.21e-07 | 43 |
meso-epithelial cell | 7.43e-07 | 45 |
lining cell | 8.56e-07 | 58 |
barrier cell | 8.56e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
cell layer | 9.13e-12 | 309 |
epithelium | 2.00e-11 | 306 |
vasculature | 6.17e-11 | 78 |
vascular system | 6.17e-11 | 78 |
trunk | 8.37e-10 | 199 |
unilaminar epithelium | 1.40e-09 | 148 |
epithelial vesicle | 2.95e-09 | 78 |
multilaminar epithelium | 2.95e-09 | 83 |
mesenchyme | 8.17e-09 | 160 |
entire embryonic mesenchyme | 8.17e-09 | 160 |
epithelial tube | 1.19e-08 | 117 |
trunk mesenchyme | 1.79e-08 | 122 |
vessel | 2.21e-08 | 68 |
paraxial mesoderm | 3.00e-08 | 72 |
presumptive paraxial mesoderm | 3.00e-08 | 72 |
somite | 3.23e-08 | 71 |
presomitic mesoderm | 3.23e-08 | 71 |
presumptive segmental plate | 3.23e-08 | 71 |
dermomyotome | 3.23e-08 | 71 |
trunk paraxial mesoderm | 3.23e-08 | 71 |
dense mesenchyme tissue | 4.65e-08 | 73 |
larynx | 5.72e-08 | 9 |
cardiovascular system | 1.24e-07 | 109 |
circulatory system | 1.30e-07 | 112 |
skeletal muscle tissue | 8.07e-07 | 62 |
striated muscle tissue | 8.07e-07 | 62 |
myotome | 8.07e-07 | 62 |