FFCP PHASE1:Hg19::chr1:180601188..180601207,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12827 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=20bp_to_ENST00000367589_5end | |||
|coexpression_cluster_id=C255 | |||
|description=CAGE_peak_2_at_XPR1_5end | |||
|id=chr1:180601188..180601207,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.84e-12!42;CL:0000860!1.21e-11!45;CL:0000766!1.12e-10!76;CL:0000557!1.78e-08!71;CL:0000839!7.32e-08!70;CL:0000738!1.94e-07!140;CL:0002009!4.89e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.02e-08;33!CL:0002057;4.02e-08;33!CL:0000094;1.63e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.48e-13,42;CL:0002057,1.48e-13,42;CL:0000766,4.29e-13,72;CL:0000473,3.48e-12,48;CL:0000234,3.48e-12,48;CL:0000557,3.90e-10,67;CL:0000839,2.57e-09,66;CL:0000738,2.81e-09,136;CL:0002009,2.61e-08,61;CL:0000763,4.26e-08,108;CL:0000049,4.26e-08,108;CL:0000094,1.70e-07,8;CL:0002194,2.30e-07,59;CL:0000576,2.30e-07,59;CL:0000040,2.30e-07,59;CL:0000559,2.30e-07,59;CL:0002031,3.43e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.29e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!2.14e-08!101;UBERON:0001434!2.14e-08!101;UBERON:0001474!1.29e-07!86;UBERON:0002371!9.54e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,9.91e-10,82;UBERON:0004765,1.11e-08,90;UBERON:0002371,2.81e-08,76;UBERON:0001434,3.41e-08,100 | |||
|phase1_expression=1.63510541343501,1.49870366723688,0.845726424575827,2.00146596706261,0.893922188854576,0.872338524100369,0,0.631719873426831,1.04474251279935,0.491467873003018,1.39560233594486,0.218441372130172,0,0.495065411840187,0.331397375727916,0.672325146451775,1.20538905604795,0.730310090387373,0.487932798790507,0.246242116153576,0,0.626909442956176,4.57977579409691,1.23186982565596,0.376627918784408,0.458480434487708,0.738905305049512,0.708397031823113,3.14691421479123,2.68680578668049,4.18003532953405,0,0.6024118375565,1.10926203050036,1.31694240986513,0.426507697462265,0,3.32397245119126,1.40381113229099,4.12320654360118,0,0,0,1.74477886535478,0.755751887377619,2.18325655069035,1.85943229524548,0.822335776043652,3.71647645074124,2.01384674625505,2.30544635876191,2.83778675866302,2.75796544589295,3.22742341791913,8.12558919566051,1.31769637679823,1.36453075028923,2.69668181334102,1.53041946185451,2.24650318953266,1.91801137739712,1.64925650093358,2.79249120670285,2.98357325372886,2.61188314765726,0.56738522469114,1.86846674698672,1.7587406567972,1.0429658368404,3.04064382587163,3.02699751316684,1.84138817993782,4.1140110367315,1.90129757680748,1.70083439972035,1.46761051855863,0.561643155732475,0.901061357049038,0.48217676009124,2.56511469367124,3.77941686678271,1.46131323011707,3.51992488922645,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,0.569212969109448,0.587237189370939,2.6759125968766,0,5.60508562981536,0.526768169550154,7.67168103443949,5.10913991573914,4.93443597598822,0.167186495390678,1.95553359980154,0.473447805734733,0,0.222820913770347,0.589211814949674,0.443067789167242,1.08321545506006,0.640456598628376,0.650296737799391,0.164437904603676,0.552700035571697,0,1.63115219478266,1.60524496853828,1.04535523804977,0.453237370790265,1.53288197440768,1.37450978193052,1.51811815211702,0,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0,0,8.26587647221403,8.02320587350522,6.66192257860875,0,0,0.511450247374121,1.44575660953827,1.00267582127178,0.289693037921647,1.5905718941022,0.486634870302636,0.472674085820339,0.221729397462564,0.263504357079378,2.61958150995425,0,0,0.324547393654683,0.174129737299267,0,0.476981248610684,0.571994910780128,1.11437250398869,0.198762407366705,0,0.694281003215189,1.13061588384802,0.419499436209906,1.10047216776027,1.04497483268405,0.258416759169329,1.06729878806013,0.33472061276467,1.20848795132744,2.28081631715554,0.976248230192678,0.735326160691737,0.81014194788176,0.625098097988558,0,0.225222960966644,0,0.949265659568129,0.549605231791222,5.27121669744253,11.6334079244498,0.872188104285069,0,1.13967460498122,1.32409180813219,1.43418310374407,0.354668382198357,0,1.06748995729705,0.24666754841716,0.311211035399766,0.538842688278752,0.163461903113459,0,0,0,0.624320153660641,1.1409436430889,0,0.23486899728753,0,0,0.204154171254893,0.122834317311768,0.413303124703062,1.18800285728205,0.741800787835671,0,0.718618141816238,0.673344455816265,0.500474079487857,1.6623846929051,0.438977620880838,0.612975591598039,0.901428353439581,0.226864366320042,0.717558542755448,0.640672166455702,0,1.50045548042201,0.309157587715317,0.257640540045629,0.558350568994769,2.02531598689519,0.779496041289589,0,0.184099797284599,0.323292113637624,0.355009592516614,0.604512589365842,0,1.54608682530637,1.36373060295417,1.14721838155602,0.731842236777572,0.530119073285941,0.348581828608555,1.24393266018445,1.00928340350251,1.09493207722749,0,0,0,0,0,1.8929088006375,2.02301628093722,3.37415441836875,2.31617342738027,2.39667388501647,3.08451804844426,1.21348177344148,2.15843611637881,2.69323009862473,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.343135620597051,1.75600456653801,2.24803506515239,0.201057944823262,0.185176890317059,0.325808305310325,0,0,0.927443239800615,0.587043471179108,0.721832238805369,1.85194205030644,0.761016608938393,0.790204397959275,1.71697232418975,0.246217006087397,2.34004265139238,0.594524649154913,4.68669169933885,1.34385702559088,0.992425680696705,1.97028749946266,2.03443756959773,0.766765358330422,28.5744677979647,0.44024217006613,4.56121854189699,2.73827911492227,4.29224273649692,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,1.74306691720059,0.399891964728228,0,0.502257091432126,2.10833939483032,0.239624855491583,0,0,2.02693829334611,0.821905290201534,2.14873155887875,0.224170287987055,3.15249216323084,6.253199670926,6.54549485026717,4.57370323600434,15.6167824629146,2.31986643833309,7.37071567471135,3.82763250991898,3.74503511973591,11.966458368161,8.70272578215674,0.613457458595699,0,0,0.623912584592421,0.892144943985809,0.473107245101804,1.17141414992713,0.601892199455438,0,1.03473071292505,0,0.553107505625109,0.434418072340414,0,0,1.03384013061444,1.50999940573032,1.60091336705167,0,1.66435439510497,1.81434175997808,0.992431231275107,3.83654933220156,2.24528075546459,0.768834895534206,0,1.44768529029247,1.48418066444991,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.483437798366489,8.82228469334453,1.47329582297434,0.803701137152247,0.182091168006717,0.786746489756545,0,0.308061348417659,0.784349769176855,0,0.316654886678627,0,0.170093705276516,0.431831832204279,0,0.541892875087706,0,0.254876273045038,0,0.223874754722178,1.53481913652154,1.0457418040996,0.256450125116389,0.328014645699706,0,0.721287081534056,6.59300146692073,9.07604499126468,0.574265537996172,0.650060246036521,3.21367859688319,0,0.308097234229289,0.307007349452259,0.275673144969061,0.537101224341368,0.725083469571143,0.170453254832202,0.890320356467374,3.47098322258054,3.84380134730212,7.14631189969671,4.4509423576442,0,0.31481234683064,0,0.616067160352178,0,0,0.37064843820784,0.429374660225974,0,0,0.38126038784765,0,0,0.318203247925937,0,0.719489830333259,0.274537029736055,0.235624804691373,0.202182481573316,0,0.421258456238981,0,0.731140468893853,0,0.272999822815972,1.97967604735198,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,2.9555068941673,1.31717957183961,0,0,0.673554789078584,0,0,0.564862804660675,0.86101074534246,0,0.443430153536676,0.229723400206959,1.01489521846434,0,0.569647187174163,0.238231775457789,0,0,0,0.79312517629427,2.13648142254946,131.85974017108,0.490080431962063,0.929015875628594,0,0.782560276832555,0.797131363644112,0,0.383010740264733,0.846694330895531,0.649243880549111,0,0.456469358066384,0.156679895773023,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0.834245708559542,0,0,1.23087398947712,0.540911356951966,0,0,0,0.293016358543788,0.485442086998054,1.5602073798847,0.568272293612826,1.67121139316383,2.07875276582847,0.307160702099232,0,0.844016498463076,0.111308705022906,1.15362711958732,2.53350489753592,1.19548792950642,0.828851746593443,0.755798243562828,0.511343412510774,1.10776324914963,0.933118762985422,0.539210106883961,10.9202916552122,0,0.295930216910801,0,1.11136990144637,0.969332746095218,0.834912883456661,17.9652418201075,1.04171104434093,0.349839999984783,0.724999575434793,1.93448862085349,0.762760950878299,0.236387681767936,1.37897349296586,0.874813840149763,0.347249989866585,1.77148277162768,1.80894657938112,0,0.552896299656123,0,0.87754158861589,20.8072465321271,2.23077990845765,1.07730361905316,1.13942055847001,2.53620294826866,1.79515288819544,0.108647371922008,2.55200927785536,0.549585560411174,0.533034776018635,0,2.04074333313532,0.664846727600626,1.1279783030859,1.76456280885966,0.671286347903371,0.569261198172555,0.635746315921515,0.843992258112108,2.61172493054636,0.989471500037586,0.216388639742091,0,2.56526937059684,1.22206028986725,0.296521128680622,0.370691816839509,0.522109747527277,0.943615861729479,0.802577647298789,1.40558667435203,0,9.19623708980822,0.485560759068186,2.76209081994573,1.20990716048664,7.95789180239274,0.695052375913368,1.35291077473043,0.72581733978073,0,0,0,0,0.569219092059585,0.277349346026277,2.08271686002157,1.27390116638691,2.43765778425127,1.22308667769421,0.171986032471617,0.387025325156341,0.803982487948041,0.739039113478883,0.678923115418936,1.412098027064,1.80784592624426,0.548167698587004,0.596143835108969,1.2029051231617,26.9860908174028,0.320635281006135,0.213452994739353,0.39961921916426,0.144090417154106,1.14536596165916,0.857974989309823,0.14405479798815,0.124252535565433,48.7886651656766,0.407712618220842,0.732219924186332,0.713987523454252,1.15580235960608,1.80126086612937,0.684526894459965,1.27746588066972,0.429765441419957,0.262887354279314,1.11712960508902,8.93725653645566,3.58936512288407,8.38651802095763,7.72606886645828,14.5061447337217,13.3695110248585,0.720599767084807,0,0.393915911536118,0.412079291905832,0.471824806979294,0.885847333632739,0.677386656526276,0,0.681017030557878,0.803765742325096,0.962776056180637,3.32352270423348,4.27450393947851,6.1904156364636,0.789744236554321,4.36065093879046,3.15222829196793,0.577000469484979,0.316801009558219,15.4187111826247,0.959575986597226,2.1440859791201,3.31045985182716,61.2787175747947,0,4.32110745600634,0.653174720218818,1.19730191562487,2.87323822622686,0.851940108927109,0.679872549120754,1.17241786942466,0,0.517131825446202,1.45455861916959,1.02652102730598,0,1.49502377594773,4.08731193259131,0,0.496166021811951,0.395223263795889,0.365377795142688,3.19170628885091,1.63205341010842,2.2562090462043,2.14441903734423,2.95085367638824,0.314108192500469,1.77213635993397,0.244052529803926,0.500763722825999,1.72022758707021,0.887432412294818,1.55241007353459,1.10678907948985,1.37478448758317,0.606596470166591,0.856396000634902,0.235265819698172,3.27834434064817,1.1593682288866,0.149254802886874,0.467426619694449,1.10961172300523,0.189403005275089,0.251567901752575,0.889811221596536,1.14420034198462,0.453692771289717,0.15543720058278,0.295710299979268,0.318593534327405,0.449803112163605,0.310525913752519,0.829412415681711,0.53168342911599,0,0.150257608997218,0.761610424337591,0.406870733204662,0.363697318405119,0.537052785212442,0.464033759878494,0.398095888698616,1.60011105865261,1.03018711554838,0.336749488765919,1.26184898228651,0.385239660814607,0.643324774124777,0.521988583930423,0.453411851024545,0.926089897295336,0.244736704506468,0.358177682162975,1.23520578864389,0.877136198314828,0.176689145945881,1.54331230616732,0.168942440653073,0.512483037175893,0.345430341731199,0,0.276516872303462,0.194860308839388,0.398594520940089,0,0,0,0.845248493434508,0.79994958341972,0.320075189082423,0.172214979660816,0,0.184105950251841,1.81843360035278,7.46492712039567,0.895260599125562,3.88169321028054,0.786329709279482,1.63814457288021,0.169732529954025,2.12574920101683,0.743614585554013,1.67593475391973,1.27201740261367,0.788617450012533,12.008561224282,1.05802783107205,1.8374728641192,1.60573062741149,0,0.638535436228605,1.43581454968528,16.13258855819,0.96820153449905,0.807378228159255,0,5.29997679905538,4.71878893390961,5.86971515269373,1.38630799380406,0.762764190934334,0,3.38157577597667,0.82731361184183,0.40341013740704,0,1.57144016688853,0,0.443568258651136,0.810451015420736,0.781078098613847,0.413373593002368,0.824405532520789,13.1273954164373,0,1.48863353516788,0.175871244359621,15.0759664614722,0,0,0.606965604236632,2.04895972216168,1.86274977341542,0.345701962667338,0.342976018874837,1.01954599465248,1.24968269769413,0.590969204419841,0.111231401892069,1.02041020705668,1.41404030924402,0,2.73947616152849,0.215927591218621,0,0.643288897589907,0.632054446930906,0.116241425368125,0,0.801711364730253,3.9371071190977,2.56077715640925,0,0,0.118332000730565,0.170426809518315,1.69354820076372,4.35303050233695,0.62041277132864,0,0,0.098150233615243,0.365753774946808,0,0.513314034281235,0,1.45713297917742,0.467878926924211,1.39265542612958,0.118920090777569,7.22854925049344,0.439762066981716,2.41540549706678,2.08370226891451,0.437119121007915,0,0,0.707029641304878,0.392616934229891,0.297046400327086,1.2679671827502,2.54890672031725,0.563903507879121,1.22469987149797,0.89947040332436,2.32120120187355,0,0.0802413666891683,0,0,0.143339583151451,1.41994405973866,0.815897882290976,12.6541700198709,0.5290268405154,1.11598505450025,3.23522940041993,1.73050624849516,0.126166424835079,0.655593431782173,0.760191006068622,1.01988829741982,0,0.827054095813604,0.250707539292375,3.94049230734845,4.82335434281121,2.48750831837634,0.620597975171371,1.0661699095049,0.23806443146374,0.516711278688049,2.29676442894674,1.00918676322552,0.381882949668989,0.808468755832877,0.435433495793923,0.342233301085281,0.5388164241167,5.09227658288002,1.99596213927608,1.46525883499754,0,0,0.269475606319761,0,0.733448665097199,1.62758471326295,0.665756774185513,0.603821380773079,0 | |||
|short_description=p2@XPR1 | |||
}} |
Revision as of 22:33, 10 January 2014
Short description: | p2@XPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_XPR1_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | 20bp_to_ENST00000367589_5end |
EntrezGene: | XPR1 |
HGNC: | 12827 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.48e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.48e-13 | 42 |
myeloid leukocyte | 4.29e-13 | 72 |
defensive cell | 3.48e-12 | 48 |
phagocyte | 3.48e-12 | 48 |
granulocyte monocyte progenitor cell | 3.90e-10 | 67 |
myeloid lineage restricted progenitor cell | 2.57e-09 | 66 |
leukocyte | 2.81e-09 | 136 |
macrophage dendritic cell progenitor | 2.61e-08 | 61 |
myeloid cell | 4.26e-08 | 108 |
common myeloid progenitor | 4.26e-08 | 108 |
granulocyte | 1.70e-07 | 8 |
monopoietic cell | 2.30e-07 | 59 |
monocyte | 2.30e-07 | 59 |
monoblast | 2.30e-07 | 59 |
promonocyte | 2.30e-07 | 59 |
hematopoietic lineage restricted progenitor cell | 3.43e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone element | 9.91e-10 | 82 |
skeletal element | 1.11e-08 | 90 |
bone marrow | 2.81e-08 | 76 |
skeletal system | 3.41e-08 | 100 |