FFCP PHASE1:Hg19::chr1:203595980..203595991,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=493 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=817 | |||
|TSSclassifier=strong | |||
|UniProt=P23634 | |||
|association_with_transcript=52bp_to_ENST00000367218,ENST00000367219,ENST00000391954,uc001gzv.2,uc001gzw.2_5end | |||
|coexpression_cluster_id=C3922 | |||
|description=CAGE_peak_4_at_ATP2B4_5end | |||
|id=chr1:203595980..203595991,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.43e-14!180;CL:0000057!1.29e-11!75;CL:0002620!1.73e-09!23;CL:0000680!6.78e-09!57;CL:0000056!6.78e-09!57;CL:0000355!6.78e-09!57;CL:0000187!1.19e-08!54;CL:0000192!2.24e-07!42;CL:0000514!2.24e-07!42;CL:0000359!2.36e-07!32;CL:0000183!2.38e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.61e-09;23!CL:0000359;2.92e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.44e-12,76;CL:0002620,8.46e-10,23;CL:0000680,3.05e-09,58;CL:0000056,3.05e-09,58;CL:0000355,3.05e-09,58;CL:0000187,5.46e-09,55;CL:0000192,8.14e-08,43;CL:0000514,8.14e-08,43;CL:0000359,9.71e-08,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.71e-11!84;UBERON:0000914!2.32e-11!83;UBERON:0002329!2.32e-11!83;UBERON:0003077!2.32e-11!83;UBERON:0003059!2.32e-11!83;UBERON:0007282!2.32e-11!83;UBERON:0009618!2.32e-11!83;UBERON:0007285!2.32e-11!83;UBERON:0001981!5.92e-10!60;UBERON:0007500!5.92e-10!60;UBERON:0004537!5.92e-10!60;UBERON:0006965!5.92e-10!60;UBERON:0004290!4.89e-09!70;UBERON:0007023!6.41e-09!115;UBERON:0001637!8.07e-09!42;UBERON:0003509!8.07e-09!42;UBERON:0004572!8.07e-09!42;UBERON:0001009!1.17e-08!113;UBERON:0002385!1.54e-08!63;UBERON:0001015!1.54e-08!63;UBERON:0000383!1.54e-08!63;UBERON:0000486!2.05e-08!82;UBERON:0004535!4.11e-08!110;UBERON:0000055!4.86e-08!69;UBERON:0001134!4.95e-08!61;UBERON:0002036!4.95e-08!61;UBERON:0003082!4.95e-08!61;UBERON:0002049!5.06e-08!79;UBERON:0007798!5.06e-08!79;UBERON:0004573!8.77e-08!33;UBERON:0004571!8.77e-08!33;UBERON:0003102!1.59e-07!95;UBERON:0000475!3.33e-07!365;UBERON:0000947!5.00e-07!21;UBERON:0010191!5.00e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.07e-08;33!UBERON:0004571;8.07e-08;33!UBERON:0000947;5.04e-07;21!UBERON:0010191;5.04e-07;21!UBERON:0001637;7.05e-07;42!UBERON:0003509;7.05e-07;42!UBERON:0004572;7.05e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.94e-11,83;UBERON:0007500,7.42e-10,59;UBERON:0001981,7.42e-10,59;UBERON:0004537,7.42e-10,59;UBERON:0006965,7.42e-10,59;UBERON:0003077,8.19e-10,72;UBERON:0007285,8.19e-10,72;UBERON:0007524,8.61e-10,73;UBERON:0002329,1.60e-09,71;UBERON:0003059,1.60e-09,71;UBERON:0007282,1.60e-09,71;UBERON:0004290,1.60e-09,71;UBERON:0009618,1.60e-09,71;UBERON:0001637,2.93e-09,42;UBERON:0003509,2.93e-09,42;UBERON:0004572,2.93e-09,42;UBERON:0007023,4.67e-09,114;UBERON:0002385,5.29e-09,64;UBERON:0001015,5.29e-09,64;UBERON:0000383,5.29e-09,64;UBERON:0001009,1.07e-08,112;UBERON:0000486,1.45e-08,83;UBERON:0001134,1.78e-08,62;UBERON:0002036,1.78e-08,62;UBERON:0003082,1.78e-08,62;UBERON:0004573,3.44e-08,33;UBERON:0004571,3.44e-08,33;UBERON:0004535,3.92e-08,109;UBERON:0000055,4.95e-08,68;UBERON:0002049,5.72e-08,78;UBERON:0007798,5.72e-08,78;UBERON:0003102,8.97e-08,99;UBERON:0007503,1.24e-07,78;UBERON:0000947,3.05e-07,21;UBERON:0010191,3.05e-07,21;UBERON:0002097,6.19e-07,41;UBERON:0002199,7.37e-07,46;UBERON:0002416,7.37e-07,46 | |||
|phase1_expression=3.99692434395225,6.20891519283851,6.62485699251064,2.00146596706261,4.46961094427288,4.36169262050184,0,5.05375898741465,5.22371256399677,3.93174298402414,1.39560233594486,6.334799791775,8.96807725976742,7.05468211872266,5.30235801164665,12.7741777825837,10.8485015044316,9.49403117503585,7.3189919818576,0.738726348460727,1.63200552995402,1.25381888591235,0.85870796139317,4.37998160233229,2.88748071068046,0,0.0821005894499457,0.236132343941038,1.57345710739562,3.83829398097213,0.928896739896456,0,2.10844143144775,0.739508020333575,0.0774672005803016,0,1.17440175733939,0,0.802177789880567,0.651032612147555,0.447830948479849,0.647787332037959,0.77272670290256,1.16318591023652,1.51150377475524,2.91100873425379,0,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,1.12945403725563,0.272906150057846,1.12361742222542,0.612167784741805,0.641858054152187,0.639337125799041,0.329851300186716,0.598390972864896,0,0.290209238628584,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0.209658645508376,1.01095768031846,0.901061357049038,0.48217676009124,0.285012743741249,0,0.182664153764634,0,0.546138611262131,0.889509253863555,0,0.400395987036012,1.14950487990897,0,0,0,0.587237189370939,0,2.64342657158052,1.12101712596307,0.790152254325231,2.55722701147983,2.35806457649499,2.05601498999509,0.668745981562712,0.651844533267181,0.946895611469467,1.94826728407911,2.67385096524417,1.17842362989935,1.55073726208535,2.43723477388514,4.09892223122161,3.51160238411671,1.47994114143309,0.829050053357545,0.289803085735052,0.889719378972363,0.535081656179426,0,2.71942422474159,1.91610246800961,3.4362744548263,3.79529538029254,2.22995790026868,1.30216690771284,2.85135613334512,2.71035214339991,2.04778577847069,2.49861453104692,2.60454977248419,3.28451198768419,5.64498881029251,8.82552646085574,2.17236605824198,31.694892620815,3.35350429851818,2.04580098949649,6.14446559053763,9.02408239144601,6.37324683427624,0.795285947051099,4.86634870302636,3.30871860074237,2.4390233720882,2.0202000709419,5.50112117090393,1.82147644146271,2.59549109949101,0.649094787309367,0.522389211897802,1.06366368415092,1.90792499444274,0.571994910780128,0.74291500265913,3.37896092523399,6.02164216574287,2.77712401286075,1.69592382577203,5.03399323451887,3.30141650328081,1.46296476575767,6.46041897923322,6.04802646567407,5.35552980423472,0.805658634218294,2.28081631715554,1.70843440283719,1.47065232138347,1.62028389576352,3.30408994651095,2.02076435363553,2.25222960966644,3.06633274931766,3.79706263827252,2.5648244150257,1.31780417436063,0,1.74437620857014,3.97577561356255,7.72446121153937,25.8197902585777,15.7760141411848,12.7680617591409,5.04609840128076,2.1349799145941,4.44001587150888,5.91300967259556,3.3677668017422,2.61539044981534,1.96764655938411,2.30470369792,0.937285727335186,6.55536161343673,2.2818872861778,3.43731965269142,3.87533845524424,5.17993421978021,2.94946694074722,5.71631679513701,2.82518929817066,4.95963749643674,3.56400857184616,7.66527480763526,0,0.718618141816238,3.70339450698946,4.12891115577482,7.75779523355712,4.82875382968922,9.19463387397059,5.85928429735728,2.26864366320042,15.9656775763087,8.32873816392413,10.5965950579781,25.2076520710898,5.66788910811414,9.27505944164265,6.70020682793723,28.6919764810153,4.67697624773753,18.6800992940645,11.7823870262143,4.68773564774555,33.7259112890784,10.7804745103575,12.0388020540446,3.67195621010264,4.09119180886252,0.860413786167011,0.243947412259191,0,0.348581828608555,0.414644220061482,1.00928340350251,0,4.69348596989448,1.28648187638577,5.52539685409922,8.35862270457562,14.4375896333917,0.354920400119532,0.674338760312407,0.482022059766964,0.772057809126758,0.435758888184812,0.949082476444386,0.943819157121151,0.784885860501384,0.38474715694639,5.16708818237254,2.80483547606892,4.115740113314,1.47008711385542,0,0.982827216677626,4.72631925345123,0.882926198829301,0.614942192715568,2.57351715447788,5.81676512665715,2.24803506515239,3.11639814476056,3.70353780634118,0.651616610620649,1.03993478527958,0,2.43453850447661,1.87853910777315,1.15493158208859,0,0.380508304469197,0,0,0.246217006087397,0,0.891786973732369,0.93733833986777,4.36753533317035,3.1190521393325,2.86587272649115,1.74380363108377,1.15014803749563,0,1.05658120815871,1.86595303986695,0.576479813667846,0.88369703398466,1.33345578013555,2.29193055334967,0,3.4214489204541,1.23392991243988,1.50171528921959,0.857479297891735,0.784917590417525,0.43596006883328,2.56684000373325,1.68053230485111,7.15312891703765,6.762422020448,5.31876233169741,4.16029747645464,1.80045161983499,2.83698264046557,3.72991050622539,7.14889968290738,4.88359444852299,1.64648067356154,4.56030658011229,1.77695974371273,1.58390374586686,21.4021957712306,6.10073421020206,15.5957866244009,0,0,0,6.46987109827273,11.4861935834114,7.13184525203592,4.1986578933598,2.67119219315498,3.40215830155802,1.12085143993527,4.92576900504818,4.31255149719035,5.26206448746968,2.28685161800217,3.90419561572865,0,0.837581326671744,2.55175500661265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| |||
|short_description=p4@ATP2B4 | |||
}} |
Revision as of 23:33, 10 January 2014
Short description: | p4@ATP2B4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATP2B4_5end |
Coexpression cluster: | C3922_Fibroblast_uterus_basal_mesenchymal_smooth_mature_amniotic |
Association with transcript: | 52bp_to_ENST00000367218, ENST00000367219, ENST00000391954, uc001gzv.2, uc001gzw.2_5end |
EntrezGene: | ATP2B4 |
HGNC: | 817 |
UniProt: | P23634 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.44e-12 | 76 |
skin fibroblast | 8.46e-10 | 23 |
muscle precursor cell | 3.05e-09 | 58 |
myoblast | 3.05e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.05e-09 | 58 |
muscle cell | 5.46e-09 | 55 |
smooth muscle cell | 8.14e-08 | 43 |
smooth muscle myoblast | 8.14e-08 | 43 |
vascular associated smooth muscle cell | 9.71e-08 | 32 |