FFCP PHASE1:Hg19::chr1:226128912..226128927,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7044 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3122 | |||
|TSSclassifier=strong | |||
|UniProt=O00292 | |||
|association_with_transcript=0bp_to_uc001hpt.1,uc009xek.1,uc010pvk.1_5end | |||
|description=CAGE_peak_1_at_LEFTY2_5end | |||
|id=chr1:226128912..226128927,- | |||
|ontology_enrichment_celltype=CL:0000540!4.54e-11!6;CL:0000031!4.54e-11!6;CL:0000404!4.54e-11!6;CL:0002322!7.03e-10!5;CL:0000136!9.93e-10!15;CL:0000047!4.92e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.18e-19;5!CL:0002615;7.78e-12;3!CL:0000540;3.96e-11;6!CL:0000404;3.96e-11;6!CL:0000136;4.48e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.05e-19,5;CL:0002615,7.50e-12,3;CL:0000540,4.18e-11,6;CL:0000031,4.18e-11,6;CL:0000404,4.18e-11,6;CL:0000047,2.49e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.04e-18;10!UBERON:0005564;1.04e-18;10!CL:0000031;3.96e-11;6!UBERON:0006603;4.73e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.84e-14!115;UBERON:0000473!1.08e-10!8;UBERON:0003135!1.18e-09!11;UBERON:0005743!7.78e-09!86;UBERON:0001017!5.26e-08!82;UBERON:0000073!2.56e-07!94;UBERON:0001016!2.56e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.27e-12;11!UBERON:0000473;2.80e-12;8!UBERON:0000922;1.30e-11;49!UBERON:0000007;1.41e-08;2!UBERON:0000991;2.29e-08;21!UBERON:0003101;9.96e-08;22!UBERON:0000079;9.96e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.85e-12,11;UBERON:0000473,3.55e-12,8;UBERON:0003133,2.78e-09,48;UBERON:0000007,1.07e-08,2;UBERON:0005156,2.41e-08,59;UBERON:0000990,2.41e-08,59;UBERON:0000991,2.49e-08,21;UBERON:0009196,2.49e-08,21;UBERON:0009117,2.49e-08,21;UBERON:0005564,2.49e-08,21;UBERON:0002323,6.19e-08,46;UBERON:0004176,6.61e-08,22;UBERON:0003886,9.74e-08,54;UBERON:0003101,1.20e-07,22;UBERON:0000079,1.20e-07,22;UBERON:0004458,2.56e-07,49 | |||
|phase1_expression=0.54503513781167,0.856402095563933,1.40954404095971,3.00219895059391,2.68176656656373,0,5.06599756336621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,5.14724822338691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,14.4731878424972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18143432568886,0.68205903612839,0,0,0.161646056818812,0,0,0,0,0,0,1.58565817968474,4.37348235460901,10.1088730296481,10.366105501537,11.8590799911545,45.9871472435546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,2.7821073144885,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,4.98579399621729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81239927631679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,3.78571177677032,0,0,0.20453736500431,0.123084805461069,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,7.8489263673873,0,0,0,0,7.33702667383415,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0,0,0,0.442287822516696,0,0,0,0,0.606610196826093,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,1.99226682220855,0.554698692052555,0,0,0,2.27144668714639,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0.199679000498991,0,0.446342914883745,1.5452198671947,0,0,0,0,0,0,0,0.795229689809303,0,95.9696296336164,95.4523689984803,88.4887920002164,0,0,0.0607495566580247,0,0.394028536495991,0.209818352539992,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,1.10043013569766,1.65695622138878,0,0.197611631897944,0,0,0.544017803369474,0.5013797880454,2.14441903734423,0.327872630709804,0,0,0,0,0,0.776503360757966,0.372578417648301,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,135.529011685362,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,1.82089681270989,7.74051450594412,24.9253660157015,0,0,0.0679697329768317,0,0,0,1.0989032999072,0,0,0,0,0,1.07214816264985,0.316027223465453,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0.102662806856247,2.3196288626764,3.88568794447312,0,0,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,2.90182777120682,47.7490549481349,0.886889507080059,0.815910637935854,8.01652215796681,18.7465595051084,81.4799502700219,4.01627100556669,1.07185652062471,0,0,0.426467963801962,0.476128862927481,0.129177819672012,0.248298857183432,0,0,0.202117188958219,0,0.684466602170562,0,0.0717222053926763,0,0,0,0,0,75.0851015691054,80.8015946048747,4.88275413978886,0.665756774185513,0.201273793591026,0 | |||
|short_description=p1@LEFTY2 | |||
}} |
Revision as of 00:27, 11 January 2014
Short description: | p1@LEFTY2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LEFTY2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001hpt.1, uc009xek.1, uc010pvk.1_5end |
EntrezGene: | LEFTY2 |
HGNC: | 3122 |
UniProt: | O00292 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.05e-19 | 5 |
adipocyte of omentum tissue | 7.50e-12 | 3 |
neuron | 4.18e-11 | 6 |
neuroblast | 4.18e-11 | 6 |
electrically signaling cell | 4.18e-11 | 6 |
neuronal stem cell | 2.49e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.85e-12 | 11 |
testis | 3.55e-12 | 8 |
reproductive organ | 2.78e-09 | 48 |
pituitary gland | 1.07e-08 | 2 |
reproductive structure | 2.41e-08 | 59 |
reproductive system | 2.41e-08 | 59 |
gonad | 2.49e-08 | 21 |
indifferent external genitalia | 2.49e-08 | 21 |
indifferent gonad | 2.49e-08 | 21 |
gonad primordium | 2.49e-08 | 21 |
body cavity | 6.19e-08 | 46 |
external genitalia | 6.61e-08 | 22 |
body cavity precursor | 9.74e-08 | 54 |
male organism | 1.20e-07 | 22 |
male reproductive system | 1.20e-07 | 22 |
body cavity or lining | 2.56e-07 | 49 |