FFCP PHASE1:Hg19::chr10:33212601..33212662,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6153 | |||
|TSSclassifier=weak | |||
|UniProt=P05556 | |||
|association_with_transcript=2bp_to_BC113901_5end | |||
|coexpression_cluster_id=C582 | |||
|description=CAGE_peak_6_at_ITGB1_5end | |||
|id=chr10:33212601..33212662,- | |||
|ontology_enrichment_celltype=CL:0000055!7.20e-16!180;CL:0000057!3.30e-12!75;CL:0000548!3.27e-11!679;CL:0000004!3.27e-11!679;CL:0000255!3.27e-11!679;CL:0000012!2.36e-10!682;CL:0000144!1.77e-09!625;CL:0002371!2.93e-08!591;CL:0000222!4.06e-08!119;CL:0000220!5.42e-08!246;CL:0000680!5.67e-08!57;CL:0000056!5.67e-08!57;CL:0000355!5.67e-08!57;CL:0002321!5.77e-08!248;CL:0000393!3.55e-07!60;CL:0000211!3.55e-07!60;CL:0002620!4.31e-07!23;CL:0000187!5.48e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.79e-08;23!CL:0000134;6.82e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.75e-14,76;CL:0000222,2.92e-08,121;CL:0000723,5.21e-08,433;CL:0000048,5.72e-08,427;CL:0000680,5.93e-08,58;CL:0000056,5.93e-08,58;CL:0000355,5.93e-08,58;CL:0002620,9.35e-08,23;CL:0000034,1.58e-07,441;CL:0000187,7.28e-07,55;CL:0000393,7.55e-07,61;CL:0000211,7.55e-07,61;CL:0002334,9.05e-07,12;CL:0002321,9.49e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.33e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.32e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.32e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.01e-08!83;UBERON:0002329!1.01e-08!83;UBERON:0003077!1.01e-08!83;UBERON:0003059!1.01e-08!83;UBERON:0007282!1.01e-08!83;UBERON:0009618!1.01e-08!83;UBERON:0007285!1.01e-08!83;UBERON:0004290!4.74e-08!70;UBERON:0003102!5.04e-08!95;UBERON:0000486!1.13e-07!82;UBERON:0004872!1.90e-07!84;UBERON:0001134!3.11e-07!61;UBERON:0002036!3.11e-07!61;UBERON:0003082!3.11e-07!61;UBERON:0002385!3.53e-07!63;UBERON:0001015!3.53e-07!63;UBERON:0000383!3.53e-07!63;UBERON:0001637!5.03e-07!42;UBERON:0003509!5.03e-07!42;UBERON:0004572!5.03e-07!42;UBERON:0002049!9.38e-07!79;UBERON:0007798!9.38e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.82e-09,99;UBERON:0007524,7.47e-09,73;UBERON:0002329,9.13e-09,71;UBERON:0003059,9.13e-09,71;UBERON:0007282,9.13e-09,71;UBERON:0004290,9.13e-09,71;UBERON:0009618,9.13e-09,71;UBERON:0003077,2.05e-08,72;UBERON:0007285,2.05e-08,72;UBERON:0002199,3.31e-08,46;UBERON:0002416,3.31e-08,46;UBERON:0000486,3.82e-08,83;UBERON:0001134,1.35e-07,62;UBERON:0002036,1.35e-07,62;UBERON:0003082,1.35e-07,62;UBERON:0002385,1.48e-07,64;UBERON:0001015,1.48e-07,64;UBERON:0000383,1.48e-07,64;UBERON:0007503,2.88e-07,78;UBERON:0004872,3.16e-07,83;UBERON:0002097,5.23e-07,41;UBERON:0000926,6.47e-07,315;UBERON:0004120,6.47e-07,315;UBERON:0006603,6.47e-07,315;UBERON:0004573,7.35e-07,33;UBERON:0004571,7.35e-07,33;UBERON:0001637,7.72e-07,42;UBERON:0003509,7.72e-07,42;UBERON:0004572,7.72e-07,42 | |||
|phase1_expression=3.63356758541113,13.7024335290229,2.67813367782345,11.0080628188443,7.15137751083661,8.72338524100369,5.06599756336621,1.26343974685366,1.30592814099919,0.245733936501509,0,0.873765488520689,1.05506791291381,2.22779435328084,8.94772914465373,10.7572023432284,16.8754467846714,10.9546513558106,15.6138495612962,0.123121058076788,0,0.313454721478088,0.286235987131057,2.18999080116615,1.00434111675842,0,0,0.0787107813136792,0,0.767658796194425,0,0,0,0.739508020333575,0.232401601740905,0,0,0,1.00272223735071,0.868043482863407,0.447830948479849,0.32389366601898,0.515151135268373,1.30858414901608,1.88937971844405,0.242584061187816,0.929716147622738,1.23350366406548,2.16794459626573,0.575384784644301,1.7931249457037,1.18241114944293,0.344745680736619,0,0,1.69418105588344,1.63743690034707,0.449446968890169,0.306083892370903,1.28371610830437,1.27867425159808,0,0.199463657621632,1.27867425159808,2.32167390902867,1.70215567407342,0.622822248995575,2.26123798731069,2.60741459210101,0.217188844705117,1.81619850790011,0,0.316462387440884,0.633765858935825,0,0.628975936525128,0,0.150176892841506,0,0.570025487482497,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,2.67281948699362,0.167186495390678,0,0.946895611469467,1.94826728407911,0.334231370655521,0.883817722424512,1.10766947291811,1.08321545506006,0.384273959177026,0.260118695119756,0,0,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0.766440987203842,0.34362744548263,0.506039384039006,0,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0.821127996921047,0.604820229674197,1.06976078313403,0.868946423296794,0,6.70700859703636,1.15076305659177,2.89151321907653,0.50133791063589,7.24232594804119,4.7717156823066,5.83961844363163,0.945348171640679,3.32594096193846,1.93236528524877,0.196468613246569,0,0.370784442784429,0.97364218096405,1.21890816109487,1.72845348674525,0,0,0,0,0.860234595106124,0,1.69592382577203,2.09749718104953,3.85165258716094,0.208994966536811,1.29208379584664,0.71153252537342,0.66944122552934,1.61131726843659,1.52054421143703,2.68468263302986,1.47065232138347,1.62028389576352,1.42879565254528,1.57170560838319,1.23872628531654,1.53316637465883,0,3.29763139074733,0,0,1.3082821564276,11.9273268406876,3.41902381494365,3.31022952033047,14.3418310374407,9.930714701554,2.80338800071154,0,6.41335625884616,1.24484414159907,4.17603083416033,3.92308567472301,0.756787138224657,4.60940739583999,0,3.43376084513353,1.71141546463335,3.43731965269142,1.05691048779388,1.45685649931318,1.12360645361799,0.816616685019573,1.47401180774122,1.34323515528495,1.18800285728205,6.92347401979959,0.910161361938026,0,1.34668891163253,2.00189631795143,0.277064115484183,0.438977620880838,4.90380473278431,3.00476117813194,3.28953331164061,6.45802688479903,4.91181994282705,6.35795703478686,10.2030972668697,4.32820622801443,2.31876486041066,2.23340227597908,6.07594796068558,3.99491721160914,5.3011092591264,2.66944706062668,3.39456719319505,9.23024940543197,3.42557133973977,3.73033303083073,1.93260853163297,1.90922284413584,0.573609190778008,1.09776335516636,0.662648841607426,0.348581828608555,1.55491582523056,1.26160425437814,0.36497735907583,3.12899064659632,16.0810234548221,0,5.57241513638375,2.88751792667834,2.9576700009961,2.19160097101532,1.68707720918437,1.7647035637183,1.30727666455444,1.18635309555548,3.23595139584395,1.76599318612811,1.92373578473195,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.368965315629341,1.02940686179115,1.20725313949488,0,4.62433273093502,2.68506490959736,0.325808305310325,0,5.77325368101093,0.579652024875384,1.87853910777315,2.16549671641611,2.77791307545966,6.46864117597634,0,0,0.246217006087397,0.468008530278475,1.18904929830983,0,2.85569617938061,1.84307626415102,1.97028749946266,2.3250715081117,0.766765358330422,0.492663237895943,0.352193736052904,0.414656231081544,0.144119953416961,0.25248486685276,0.698476837213859,0,0,0,1.33675740514321,1.50171528921959,0.285826432630578,0.224262168690721,0,1.83345714552375,2.71470603091333,0,5.917119267892,3.72313363218819,6.24044621468197,0,0,0.266422179016099,3.0025378668211,0,0.823240336780769,0.65147236858747,2.84313558994037,2.37585561880029,4.52159065589379,2.61460037580088,9.49743416229542,3.64871341923571,1.50677127429638,2.10833939483032,3.59437283237374,0,2.85273810081437,6.9495027200438,6.1642896765115,2.68591444859843,0.560425719967636,0.788123040807709,2.37190332345469,0.641715181398742,0.508189248444927,1.30139853857622,2.31986643833309,0.335032530668698,1.91381625495949,0,2.99161459204025,0.414415513436035,1.59498939234882,3.00102312635806,1.89885516589815,14.3499894456257,17.8428988797162,6.62350143142526,6.09135357962109,0.300946099727719,0,2.0694614258501,3.98535359121262,1.47495334833363,3.73599542212756,0.391602314925481,0,0,0.647142602455851,0.533637789017222,0.909382714338778,0,1.20956117331872,2.23297027036899,2.455391572609,10.9457436828899,2.81906128362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| |||
|short_description=p6@ITGB1 | |||
}} |
Revision as of 02:30, 11 January 2014
Short description: | p6@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ITGB1_5end |
Coexpression cluster: | C582_Smooth_tenocyte_mesenchymal_leiomyoma_Fibroblast_Olfactory_Aortic |
Association with transcript: | 2bp_to_BC113901_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | P05556 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.75e-14 | 76 |
mesodermal cell | 2.92e-08 | 121 |
somatic stem cell | 5.21e-08 | 433 |
multi fate stem cell | 5.72e-08 | 427 |
muscle precursor cell | 5.93e-08 | 58 |
myoblast | 5.93e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.93e-08 | 58 |
skin fibroblast | 9.35e-08 | 23 |
stem cell | 1.58e-07 | 441 |
muscle cell | 7.28e-07 | 55 |
electrically responsive cell | 7.55e-07 | 61 |
electrically active cell | 7.55e-07 | 61 |
preadipocyte | 9.05e-07 | 12 |
embryonic cell | 9.49e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.82e-09 | 99 |
dense mesenchyme tissue | 7.47e-09 | 73 |
somite | 9.13e-09 | 71 |
presomitic mesoderm | 9.13e-09 | 71 |
presumptive segmental plate | 9.13e-09 | 71 |
dermomyotome | 9.13e-09 | 71 |
trunk paraxial mesoderm | 9.13e-09 | 71 |
paraxial mesoderm | 2.05e-08 | 72 |
presumptive paraxial mesoderm | 2.05e-08 | 72 |
integument | 3.31e-08 | 46 |
integumental system | 3.31e-08 | 46 |
multilaminar epithelium | 3.82e-08 | 83 |
skeletal muscle tissue | 1.35e-07 | 62 |
striated muscle tissue | 1.35e-07 | 62 |
myotome | 1.35e-07 | 62 |
muscle tissue | 1.48e-07 | 64 |
musculature | 1.48e-07 | 64 |
musculature of body | 1.48e-07 | 64 |
epithelial vesicle | 2.88e-07 | 78 |
splanchnic layer of lateral plate mesoderm | 3.16e-07 | 83 |
skin of body | 5.23e-07 | 41 |
mesoderm | 6.47e-07 | 315 |
mesoderm-derived structure | 6.47e-07 | 315 |
presumptive mesoderm | 6.47e-07 | 315 |
systemic artery | 7.35e-07 | 33 |
systemic arterial system | 7.35e-07 | 33 |
artery | 7.72e-07 | 42 |
arterial blood vessel | 7.72e-07 | 42 |
arterial system | 7.72e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.32e-10 | 14 |