FFCP PHASE1:Hg19::chr10:52385140..52385179,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=259230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29799 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-217bp_to_uc010qhk.1_5end | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_12_at_SGMS1_5end | |||
|id=chr10:52385140..52385179,- | |||
|ontology_enrichment_celltype=CL:0000738!1.88e-29!140;CL:0000542!9.13e-26!53;CL:0000051!9.13e-26!53;CL:0002087!1.03e-25!119;CL:0000838!4.94e-25!52;CL:0002031!6.73e-25!124;CL:0000037!5.94e-23!172;CL:0000566!5.94e-23!172;CL:0000988!7.05e-22!182;CL:0002032!2.81e-20!165;CL:0000837!2.81e-20!165;CL:0000791!1.97e-17!18;CL:0000789!1.97e-17!18;CL:0002420!1.97e-17!18;CL:0002419!1.97e-17!18;CL:0000790!1.97e-17!18;CL:0000084!1.59e-15!25;CL:0000827!1.59e-15!25;CL:0000625!1.61e-11!11;CL:0002393!2.11e-11!9;CL:0002397!2.11e-11!9;CL:0000236!1.36e-09!14;CL:0000624!5.31e-09!6;CL:0002057!1.95e-08!42;CL:0000945!4.63e-08!24;CL:0000826!4.63e-08!24;CL:0000860!1.82e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.20e-29;18!CL:0000789;4.20e-29;18!CL:0002419;4.20e-29;18!CL:0000084;3.93e-24;25!CL:0000542;7.33e-22;53!CL:0000624;1.33e-19;6!CL:0000898;2.89e-15;3!CL:0000623;2.96e-15;3!CL:0000625;1.44e-14;11!CL:0000236;1.86e-12;13!CL:0000815;1.34e-10;2!CL:0000792;1.34e-10;2!CL:0002677;1.34e-10;2!CL:0002087;1.02e-07;104!CL:0002393;2.03e-07;6!CL:0002397;2.03e-07;6!CL:0000767;2.52e-07;3!CL:0000875;7.69e-07;3!CL:0002396;7.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.11e-34,52;CL:0000542,6.24e-34,53;CL:0000051,6.24e-34,53;CL:0000791,2.81e-29,18;CL:0000789,2.81e-29,18;CL:0002420,2.81e-29,18;CL:0002419,2.81e-29,18;CL:0000790,2.81e-29,18;CL:0000738,2.07e-27,136;CL:0002087,9.16e-25,115;CL:0000084,3.21e-24,25;CL:0000827,3.21e-24,25;CL:0002031,1.08e-21,120;CL:0000037,7.12e-21,168;CL:0000624,1.08e-19,6;CL:0000988,1.85e-19,177;CL:0002032,5.57e-19,161;CL:0000837,5.57e-19,161;CL:0000898,2.34e-15,3;CL:0000623,3.26e-15,3;CL:0000825,3.26e-15,3;CL:0000625,1.16e-14,11;CL:0002393,2.19e-12,9;CL:0002397,2.19e-12,9;CL:0000236,1.60e-11,14;CL:0000815,1.14e-10,2;CL:0000792,1.14e-10,2;CL:0002677,1.14e-10,2;CL:0000134,1.11e-07,354;CL:0002320,2.15e-07,361;CL:0000767,2.68e-07,3;CL:0000875,8.29e-07,3;CL:0002396,8.29e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.20e-29;18!CL:0000051;7.33e-22;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.52e-07!102;UBERON:0003061!6.52e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.31e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0.0821005894499457,0,3.14691421479123,4.60595277716655,0.928896739896456,0,0,0,0.154934401160603,0,0,3.32397245119126,1.60435557976113,3.47217393145363,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0.434377689410233,0,0,0,0.422510572623884,0.212604299965044,0.838634582033504,0.673971786878971,0.450530678524519,0.16072558669708,2.56511469367124,1.19350006319454,0.91332076882317,0,2.18455444504853,0,0.426730222566507,0.400395987036012,1.72425731986345,0.661044872784862,4.77026877267682,3.98449078376614,6.45960908308033,3.05818582500183,0,1.68152568894461,0,0.786839080455332,2.75107533924415,2.2616164889946,1.00311897234407,2.93330039970231,5.20792586308207,1.94826728407911,0.222820913770347,7.07054177939609,3.76607620792156,4.06205795647523,0.128091319725675,0.390178042679635,0.493313713811028,0,0.289803085735052,2.22429844743091,0.802622484269139,3.1360657141493,0.113309342697566,6.51474839123266,5.84166657320471,3.54227568827304,0.318565414324097,1.95325036156926,0,0.903450714466637,0.639933055772092,1.24930726552346,0.710331756132051,1.64225599384209,5.84659555351724,4.81392352410313,4.34473211648397,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.288239906833923,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,3.15249216323084,6.46882724578552,4.49200626979119,0,0,0.773288812777695,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,1.24060815673732,0.215714200818617,1.17400313583789,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0.211673582723883,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,2.62618933211459,0,3.99308912729002,0,0,0,0.16480387422676,0,0.398495976502139,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0,0.0769502585037971,0,0,0,0.217294743844016,0.638002319463839,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0.0674035438541849,0,0.254019996197353,0,0,0.803765742325096,0.962776056180637,0.415440338029185,0,2.32140586367385,0.0607495566580247,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.266107110487916,0.115233987555779,0.171488009437418,0.135939465953663,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0.535928260312357,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0.217716747896961,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p12@SGMS1 | |||
}} |
Revision as of 02:50, 11 January 2014
Short description: | p12@SGMS1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_SGMS1_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -217bp_to_uc010qhk.1_5end |
EntrezGene: | SGMS1 |
HGNC: | 29799 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data