FFCP PHASE1:Hg19::chr10:71333172..71333186,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50674 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13806 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y4Z2 | |||
|association_with_transcript=23bp_to_NM_020999_5end | |||
|coexpression_cluster_id=C298 | |||
|description=CAGE_peak_1_at_NEUROG3_5end | |||
|id=chr10:71333172..71333186,- | |||
|ontology_enrichment_celltype=CL:0000990!1.54e-07!8;CL:0000136!2.70e-07!15;CL:0002521!3.97e-07!3;CL:0002615!8.94e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002521;5.52e-17;3!CL:0000136;6.74e-15;13!CL:0002617;3.18e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,5.30e-17,3;CL:0000136,5.84e-13,15;CL:0002617,3.09e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.24e-09!27;UBERON:0002190!3.97e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;6.81e-23;17!UBERON:0002108;1.76e-21;4!UBERON:0005409;7.31e-18;22!UBERON:0002190;5.52e-17;3!UBERON:0004921;7.50e-11;33!UBERON:0002072;1.43e-10;5!UBERON:0000059;3.79e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.10e-23,17;UBERON:0002108,1.48e-21,4;UBERON:0002190,5.30e-17,3;UBERON:0005409,7.44e-16,25;UBERON:0002072,1.40e-10,5;UBERON:0000059,3.24e-10,11 | |||
|phase1_expression=0,3.21150785836475,0.422863212287913,0,2.68176656656373,0,12.6649939084155,0,4.70134130759709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798317485731266,0,0,0,0,0,0,0,0,1.2847046008296,4.43959355820305,0,0,0.307240764308458,1.56573275524691,0.667396566847634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.76915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0.327130788511688,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,6.39211104356647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,122.350339390681,0,0,0,0,1.05673990496671,1.92935395269862,3.0598338470554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@NEUROG3 | |||
}} |
Revision as of 03:17, 11 January 2014
Short description: | p1@NEUROG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NEUROG3_5end |
Coexpression cluster: | C298_small_optic_substantia_thalamus_diencephalon_globus_occipital |
Association with transcript: | 23bp_to_NM_020999_5end |
EntrezGene: | NEUROG3 |
HGNC: | 13806 |
UniProt: | Q9Y4Z2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 5.30e-17 | 3 |
fat cell | 5.84e-13 | 15 |
adipocyte of breast | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.10e-23 | 17 |
small intestine | 1.48e-21 | 4 |
subcutaneous adipose tissue | 5.30e-17 | 3 |
gastrointestinal system | 7.44e-16 | 25 |
hypodermis | 1.40e-10 | 5 |
large intestine | 3.24e-10 | 11 |