FFCP PHASE1:Hg19::chr10:105037641..105037652,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6057 | |||
|TSSclassifier=strong | |||
|UniProt=Q59EM6 | |||
|association_with_transcript=172bp_to_AB209785_5end | |||
|coexpression_cluster_id=C247 | |||
|description=CAGE_peak_16_at_INA_5end | |||
|id=chr10:105037641..105037652,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.60e-56!57;UBERON:0005068!5.60e-56!57;UBERON:0006241!5.60e-56!57;UBERON:0007135!5.60e-56!57;UBERON:0002619!9.37e-52!22;UBERON:0001950!2.81e-50!20;UBERON:0001017!4.98e-46!82;UBERON:0002616!9.06e-46!59;UBERON:0000956!2.35e-45!25;UBERON:0000203!2.35e-45!25;UBERON:0005743!1.23e-43!86;UBERON:0002020!8.56e-42!34;UBERON:0003528!8.56e-42!34;UBERON:0000073!8.68e-42!94;UBERON:0001016!8.68e-42!94;UBERON:0000955!4.97e-41!69;UBERON:0006238!4.97e-41!69;UBERON:0001869!1.25e-39!32;UBERON:0002346!5.28e-39!90;UBERON:0003075!3.72e-38!86;UBERON:0007284!3.72e-38!86;UBERON:0002780!4.35e-38!41;UBERON:0001890!4.35e-38!41;UBERON:0006240!4.35e-38!41;UBERON:0001893!3.89e-37!34;UBERON:0003080!4.25e-37!42;UBERON:0002791!8.27e-34!33;UBERON:0002021!1.34e-25!5;UBERON:0007023!8.04e-25!115;UBERON:0003056!2.33e-24!61;UBERON:0000924!1.54e-21!173;UBERON:0006601!1.54e-21!173;UBERON:0000033!1.00e-20!123;UBERON:0004121!1.32e-20!169;UBERON:0003076!8.54e-20!15;UBERON:0003057!8.54e-20!15;UBERON:0000153!1.67e-19!129;UBERON:0007811!1.67e-19!129;UBERON:0001872!2.90e-16!5;UBERON:0000025!4.35e-16!194;UBERON:0000988!9.85e-16!3;UBERON:0002298!2.72e-15!8;UBERON:0004733!2.54e-14!12;UBERON:0002028!2.54e-14!12;UBERON:0007277!2.54e-14!12;UBERON:0004732!3.58e-13!13;UBERON:0000200!3.84e-13!6;UBERON:0004111!1.11e-11!241;UBERON:0002148!8.12e-11!2;UBERON:0009662!8.12e-11!2;UBERON:0001871!6.99e-10!7;UBERON:0000064!2.64e-09!219;UBERON:0002680!4.24e-09!9;UBERON:0001895!4.24e-09!9;UBERON:0010092!4.24e-09!9;UBERON:0000477!7.97e-09!286;UBERON:0000483!1.78e-08!309;UBERON:0000119!2.48e-08!312;UBERON:0006331!1.75e-07!3;UBERON:0002240!1.99e-07!3;UBERON:0001896!2.34e-07!3;UBERON:0005290!2.34e-07!3;UBERON:0010096!2.34e-07!3;UBERON:0002771!3.42e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;4.27e-34;3!UBERON:0002021;5.15e-21;5!UBERON:0002298;7.67e-18;6!UBERON:0002680;2.19e-12;9!UBERON:0001895;2.19e-12;9!UBERON:0004733;1.22e-09;12!UBERON:0002028;1.22e-09;12!UBERON:0004732;5.28e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,4.27e-34,3;UBERON:0002021,5.15e-21,5;UBERON:0002298,7.67e-18,6;UBERON:0002680,2.19e-12,9;UBERON:0001895,2.19e-12,9;UBERON:0010092,2.19e-12,9;UBERON:0004733,1.22e-09,12;UBERON:0002028,1.22e-09,12;UBERON:0007277,1.22e-09,12;UBERON:0004732,5.28e-09,13;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003076,5.55e-08,15;UBERON:0003057,5.55e-08,15;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p16@INA | |||
}} |
Revision as of 04:47, 11 January 2014
Short description: | p16@INA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_INA_5end |
Coexpression cluster: | C247_pons_locus_medulla_spinal_paracentral_medial_occipital |
Association with transcript: | 172bp_to_AB209785_5end |
EntrezGene: | INA |
HGNC: | 6057 |
UniProt: | Q59EM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pons | 4.27e-34 | 3 |
occipital lobe | 5.15e-21 | 5 |
brainstem | 7.67e-18 | 6 |
regional part of metencephalon | 2.19e-12 | 9 |
metencephalon | 2.19e-12 | 9 |
future metencephalon | 2.19e-12 | 9 |
segmental subdivision of hindbrain | 1.22e-09 | 12 |
hindbrain | 1.22e-09 | 12 |
presumptive hindbrain | 1.22e-09 | 12 |
segmental subdivision of nervous system | 5.28e-09 | 13 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
posterior neural tube | 5.55e-08 | 15 |
chordal neural plate | 5.55e-08 | 15 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |