FFCP PHASE1:Hg19::chr11:10315189..10315209,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr11:10315189..10315209,+ | |||
|id=chr11:10315189..10315209,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.53e-27!42;CL:0000860!1.18e-24!45;CL:0000766!5.91e-21!76;CL:0000557!3.01e-17!71;CL:0002009!1.52e-16!65;CL:0002194!6.11e-16!63;CL:0000576!6.11e-16!63;CL:0000040!6.11e-16!63;CL:0000559!6.11e-16!63;CL:0000839!4.17e-15!70;CL:0002371!5.23e-13!591;CL:0000048!4.02e-12!430;CL:0000723!2.43e-11!436;CL:0000115!4.83e-11!35;CL:0000144!1.11e-10!625;CL:0000034!1.59e-10!444;CL:0000012!1.11e-09!682;CL:0000222!1.48e-09!119;CL:0000548!1.63e-09!679;CL:0000004!1.63e-09!679;CL:0000255!1.63e-09!679;CL:0002078!3.18e-09!44;CL:0002139!3.57e-09!24;CL:0000003!1.36e-07!722;CL:0000057!1.73e-07!75;CL:0000063!1.82e-07!578;CL:0000213!2.47e-07!57;CL:0000215!2.47e-07!57;CL:0002620!2.50e-07!23;CL:0002320!2.80e-07!365;CL:0000134!2.95e-07!358;CL:0000071!3.56e-07!18;CL:0002546!3.56e-07!18;CL:0000055!5.98e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-23;33!CL:0002057;1.43e-23;33!CL:0000473;1.11e-17;39!CL:0000234;1.11e-17;39!CL:0000576;9.09e-17;48!CL:0000766;1.92e-14;69!CL:0000115;2.85e-10;36!CL:0002139;5.80e-10;24!CL:0002620;6.07e-08;23!CL:0000071;1.21e-07;18!CL:0002078;3.49e-07;45!CL:0000094;5.45e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.10e-31,42;CL:0002057,5.10e-31,42;CL:0000473,6.46e-28,48;CL:0000234,6.46e-28,48;CL:0000766,5.15e-27,72;CL:0000557,1.92e-22,67;CL:0002009,1.35e-21,61;CL:0002194,6.96e-21,59;CL:0000576,6.96e-21,59;CL:0000040,6.96e-21,59;CL:0000559,6.96e-21,59;CL:0000839,2.30e-20,66;CL:0000048,2.76e-17,427;CL:0000723,3.00e-16,433;CL:0000034,1.88e-15,441;CL:0000115,2.46e-12,36;CL:0000134,1.24e-11,354;CL:0002320,2.56e-11,361;CL:0000763,2.06e-10,108;CL:0000049,2.06e-10,108;CL:0002139,6.72e-10,24;CL:0002078,1.04e-09,45;CL:0000222,1.11e-08,121;CL:0002620,2.91e-08,23;CL:0000219,9.89e-08,386;CL:0000071,1.38e-07,18;CL:0002546,1.38e-07,18;CL:0000213,2.11e-07,58;CL:0000215,2.11e-07,58;CL:0000057,2.93e-07,76;CL:0000094,6.74e-07,8;CL:0002393,8.43e-07,9;CL:0002397,8.43e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-22;42!CL:0002546;1.21e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.60e-21!216;UBERON:0002193!3.36e-20!112;UBERON:0002390!1.02e-17!102;UBERON:0003061!1.02e-17!102;UBERON:0002371!4.50e-17!80;UBERON:0000926!6.70e-17!448;UBERON:0004120!6.70e-17!448;UBERON:0006603!6.70e-17!448;UBERON:0001474!3.01e-16!86;UBERON:0002204!4.03e-16!167;UBERON:0002405!6.32e-15!115;UBERON:0000480!6.39e-15!626;UBERON:0000467!6.41e-15!625;UBERON:0004765!1.64e-14!101;UBERON:0001434!1.64e-14!101;UBERON:0000468!7.74e-12!659;UBERON:0000055!1.46e-11!69;UBERON:0004535!9.50e-11!110;UBERON:0002049!3.76e-10!79;UBERON:0007798!3.76e-10!79;UBERON:0001009!6.73e-10!113;UBERON:0001981!1.85e-09!60;UBERON:0007500!1.85e-09!60;UBERON:0004537!1.85e-09!60;UBERON:0006965!1.85e-09!60;UBERON:0002384!2.43e-07!375;UBERON:0001637!3.23e-07!42;UBERON:0003509!3.23e-07!42;UBERON:0004572!3.23e-07!42;UBERON:0001986!3.56e-07!18;UBERON:0004638!3.56e-07!18;UBERON:0004852!3.56e-07!18;UBERON:0000923!6.60e-07!604;UBERON:0005291!6.60e-07!604;UBERON:0006598!6.60e-07!604;UBERON:0002532!6.60e-07!604;UBERON:0004872!6.63e-07!84;UBERON:0002050!7.77e-07!605;UBERON:0005423!7.77e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.21e-07;18!UBERON:0001986;1.21e-07;18!UBERON:0004852;1.21e-07;18!UBERON:0000055;8.04e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.17e-27,108;UBERON:0003081,1.93e-26,203;UBERON:0002390,8.30e-24,98;UBERON:0003061,8.30e-24,98;UBERON:0002405,9.84e-23,93;UBERON:0002371,1.25e-22,76;UBERON:0001474,2.79e-21,82;UBERON:0000926,7.46e-20,315;UBERON:0004120,7.46e-20,315;UBERON:0006603,7.46e-20,315;UBERON:0004765,7.01e-19,90;UBERON:0001434,5.06e-18,100;UBERON:0002204,9.70e-18,167;UBERON:0000055,4.18e-12,68;UBERON:0004535,1.80e-11,109;UBERON:0002384,7.65e-11,371;UBERON:0002049,9.76e-11,78;UBERON:0007798,9.76e-11,78;UBERON:0001009,1.75e-10,112;UBERON:0007500,5.43e-10,59;UBERON:0001981,5.43e-10,59;UBERON:0004537,5.43e-10,59;UBERON:0006965,5.43e-10,59;UBERON:0004638,1.38e-07,18;UBERON:0001986,1.38e-07,18;UBERON:0004852,1.38e-07,18;UBERON:0001637,1.68e-07,42;UBERON:0003509,1.68e-07,42;UBERON:0004572,1.68e-07,42;UBERON:0004872,3.49e-07,83;UBERON:0004573,7.94e-07,33;UBERON:0004571,7.94e-07,33 | |||
|phase1_expression=2.18014055124668,2.35510576280081,1.40954404095971,2.00146596706261,1.34088328328186,1.74467704820074,10.1319951267324,0.631719873426831,3.13422753839806,2.7030733015166,2.79120467188971,0,0.263766978228454,0.618831764800233,1.32558950291166,1.34465029290355,1.80808358407193,0.730310090387373,0,0.246242116153576,1.42800483870977,0,0,0.273748850145768,0,0,0,0,6.68719270643137,3.0706351847777,8.66970290570026,4.59710612239464,6.024118375565,1.10926203050036,0,0,2.64240395401362,67.0334444323572,40.3094339414985,48.393424169635,0.447830948479849,1.94336199611388,2.31818010870768,20.5011516679186,18.8937971844405,15.7679639772081,42.766942790646,27.1370806094405,35.3065262820418,56.3877088951415,28.6899991312593,28.1413853567416,74.8098127198462,35.5016575971104,44.6907405761328,32.0011977222428,22.1053981546855,19.3262196622773,83.5609026172564,37.869625194979,57.5403413219137,28.6970631162443,15.3587016368657,17.0489900213078,104.47532590629,95.8881029728026,94.6689818473274,42.4610244283896,25.5526630025899,24.7595282963833,84.1505308660383,66.6582521137492,63.6089398756178,4.43636101255078,7.86635909870661,8.59600446584341,15.1643652047768,13.6660972485771,11.7329678288868,7.12531859353121,4.17725022118089,2.92262646023414,0,0,0.889509253863555,0.853460445133014,0.400395987036012,0,0,0,0,1.76171156811282,0.764546456250458,1.32171328579026,6.72610275577843,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0.127986611154418,2.49861453104692,0.473554504088034,0,0,0,0.289648807765598,0,0.670700859703636,0.383587685530591,2.89151321907653,2.00535164254356,1.73815822752988,0.795285947051099,3.89307896242109,0.378139268656271,0.443458794925128,0.175669571386252,0.261958150995425,0,0.370784442784429,0,0.348259474598534,0.398873881556595,0.476981248610684,0.571994910780128,0.74291500265913,3.37896092523399,5.16140757063675,6.2485290289367,6.78369530308812,2.09749718104953,3.02629846134074,3.34391946458897,2.58416759169329,2.13459757612026,3.68192674041137,4.02829317109147,5.32190474002959,5.12530320851156,2.57364156242108,3.24056779152704,1.60739510911344,0.898117490504679,2.70267553159973,12.2653309972707,6.6448596169769,4.76324534219059,84.3394671590805,162.867710942297,0,1.49091585508596,1.39293562831038,4.10468460520978,2.29469296599051,1.77334191099179,0,3.20246987189115,0.49333509683432,1.24484414159907,1.34710672069688,1.79808093424805,1.81628913173918,0,0.468642863667593,2.80944069147288,2.85235910772225,1.64393548606981,1.76151747965647,3.56120477609889,3.79217178096071,2.24569588380383,2.08818339430006,1.54988671763648,4.75201142912821,4.69807165629258,1.82032272387605,3.59309070908119,1.17835279767846,2.00189631795143,2.21651292387346,0.877955241761676,0.919463387397059,3.15499923703853,0.907457465280168,4.48474089222155,3.84403299873421,3.60284231971255,2.10063767259082,4.01904864029912,4.89517026086695,3.53622027030021,2.19409231913646,1.26668106709558,6.05841058185875,4.23429533754577,3.07127507955743,1.77504796258307,2.01504196455281,1.86516651541536,1.73934767846967,1.36373060295417,1.72082757233402,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0.72995471815166,4.69348596989448,5.14592750554308,12.4321429217232,1.85747171212792,2.16563844500876,1.41968160047813,0.337169380156203,0.482022059766964,1.98529150918309,1.08939722046203,0.474541238222193,1.75280700608214,1.76599318612811,1.92373578473195,5.16708818237254,5.60967095213783,0.4115740113314,1.47008711385542,0,0.982827216677626,14.7697476670351,0,0.737930631258681,1.3725424823882,0.548751427043128,1.1240175325762,0.402115889646523,0.462942225792648,1.62904152655162,5.19967392639789,2.88662684050547,0.463721619900307,0.352226082707465,3.75352764178792,6.01881166349594,5.13686211033415,2.37061319387782,0,0.492434012174795,0,1.18904929830983,0,0.16798212819886,1.84307626415102,0.447792613514241,0.871901815541886,1.53353071666084,1.47798971368783,0.088048434013226,9.53709331487551,13.1149157609435,4.79721247020244,0.190493682876507,0.763976851116555,2.34434894420094,3.4214489204541,0.308482478109971,0,0.285826432630578,2.46688385559794,2.61576041299968,1.98013371716565,0.129271715757778,7.15312891703765,1.690605505112,1.59562869950922,4.16029747645464,2.57207374262142,0,3.19706614819319,0.714889968290738,1.08524321078289,0.823240336780769,1.30294473717494,0.355391948742546,0.791951872933429,1.20575750823834,0,1.09970290300263,2.43247561282381,1.00451418286425,2.10833939483032,0.239624855491583,1.14861935834114,1.42636905040718,1.44781306667579,4.72595541865882,1.25342674267927,0,1.18218456121156,1.07813787429759,3.08023287071396,0.254094624222463,0,0,0.167516265334349,0.637938751653163,50.1834706044612,29.9161459204025,103.603878359009,1.2269149171914,1.00034104211935,0.271265023699736,1.87173775377726,1.78428988797162,1.10391690523754,1.7571212248907,0.300946099727719,0,1.03473071292505,0.664225598535437,2.21243002250044,2.0852067472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| |||
|short_description=p@chr11:10315189..10315209,+ | |||
}} |
Revision as of 06:32, 11 January 2014
Short description: | p@chr11:10315189..10315209, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:10315189..10315209, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.17e-27 | 108 |
lateral plate mesoderm | 1.93e-26 | 203 |
hematopoietic system | 8.30e-24 | 98 |
blood island | 8.30e-24 | 98 |
immune system | 9.84e-23 | 93 |
bone marrow | 1.25e-22 | 76 |
bone element | 2.79e-21 | 82 |
mesoderm | 7.46e-20 | 315 |
mesoderm-derived structure | 7.46e-20 | 315 |
presumptive mesoderm | 7.46e-20 | 315 |
skeletal element | 7.01e-19 | 90 |
skeletal system | 5.06e-18 | 100 |
musculoskeletal system | 9.70e-18 | 167 |
vessel | 4.18e-12 | 68 |
cardiovascular system | 1.80e-11 | 109 |
connective tissue | 7.65e-11 | 371 |
vasculature | 9.76e-11 | 78 |
vascular system | 9.76e-11 | 78 |
circulatory system | 1.75e-10 | 112 |
epithelial tube open at both ends | 5.43e-10 | 59 |
blood vessel | 5.43e-10 | 59 |
blood vasculature | 5.43e-10 | 59 |
vascular cord | 5.43e-10 | 59 |
blood vessel endothelium | 1.38e-07 | 18 |
endothelium | 1.38e-07 | 18 |
cardiovascular system endothelium | 1.38e-07 | 18 |
artery | 1.68e-07 | 42 |
arterial blood vessel | 1.68e-07 | 42 |
arterial system | 1.68e-07 | 42 |
splanchnic layer of lateral plate mesoderm | 3.49e-07 | 83 |
systemic artery | 7.94e-07 | 33 |
systemic arterial system | 7.94e-07 | 33 |