FFCP PHASE1:Hg19::chr12:2300597..2300606,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:2300597..2300606,+ | |||
|id=chr12:2300597..2300606,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000785;1.10e-13;1!CL:0000819;1.10e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,5.85e-14,1;CL:0000785,1.28e-07,2;CL:0000955,1.28e-07,2;CL:0000818,1.28e-07,2;CL:0000954,1.28e-07,2;CL:0000816,1.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.98e-14;1!UBERON:0004140;1.10e-13;1!UBERON:0005062;1.61e-13;4!UBERON:0007284;1.61e-13;4!UBERON:0004872;5.47e-08;7!CL:0000954;1.75e-07;2!UBERON:0006965;1.75e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.10e-13;1!DOID:8675;1.10e-13;1!DOID:114;1.05e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.85e-14,1;DOID:8675,5.85e-14,1;DOID:114,9.25e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.21e-28!115;UBERON:0001049!9.20e-23!57;UBERON:0005068!9.20e-23!57;UBERON:0006241!9.20e-23!57;UBERON:0007135!9.20e-23!57;UBERON:0002780!1.42e-20!41;UBERON:0001890!1.42e-20!41;UBERON:0006240!1.42e-20!41;UBERON:0001893!6.01e-20!34;UBERON:0003080!6.74e-20!42;UBERON:0001869!8.17e-20!32;UBERON:0002791!8.45e-19!33;UBERON:0003075!1.51e-18!86;UBERON:0007284!1.51e-18!86;UBERON:0002616!1.85e-18!59;UBERON:0002346!1.88e-18!90;UBERON:0002020!2.20e-18!34;UBERON:0003528!2.20e-18!34;UBERON:0001017!1.20e-17!82;UBERON:0005743!1.50e-17!86;UBERON:0000955!2.34e-17!69;UBERON:0006238!2.34e-17!69;UBERON:0000073!7.20e-17!94;UBERON:0001016!7.20e-17!94;UBERON:0002619!3.59e-16!22;UBERON:0000956!2.19e-15!25;UBERON:0000203!2.19e-15!25;UBERON:0003056!1.37e-13!61;UBERON:0001950!1.78e-13!20;UBERON:0000153!5.31e-10!129;UBERON:0007811!5.31e-10!129;UBERON:0000033!1.38e-09!123;UBERON:0000924!3.49e-09!173;UBERON:0006601!3.49e-09!173;UBERON:0004121!5.05e-09!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.03e-21;20!UBERON:0002619;3.54e-19;22!UBERON:0003978;1.08e-17;3!UBERON:0000946;1.08e-17;3!UBERON:0000956;6.18e-17;25!UBERON:0000203;6.18e-17;25!UBERON:0002146;3.98e-14;1!UBERON:0005623;3.98e-14;1!UBERON:0002134;1.10e-13;1!UBERON:0005208;1.10e-13;1!UBERON:0004145;1.10e-13;1!UBERON:0005946;1.10e-13;1!UBERON:0005965;1.10e-13;1!UBERON:0002078;1.10e-13;1!UBERON:0001872;3.54e-11;5!UBERON:0003528;4.06e-11;34!UBERON:0002020;4.06e-11;34!UBERON:0001893;4.89e-11;34!UBERON:0002791;5.88e-11;32!UBERON:0001869;8.64e-11;32!UBERON:0000200;3.56e-09;6!UBERON:0002780;3.91e-09;41!UBERON:0001890;3.91e-09;41!UBERON:0007100;2.77e-08;25!UBERON:0001871;5.47e-08;6!UBERON:0000073;6.49e-08;53!UBERON:0002616;6.49e-08;53!UBERON:0002771;1.75e-07;2!UBERON:0001876;1.75e-07;2!UBERON:0001897;1.75e-07;2!UBERON:0002702;1.75e-07;2!UBERON:0002081;1.75e-07;2!UBERON:0002133;1.75e-07;2!UBERON:0010225;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,6.22e-21,20;UBERON:0002619,4.30e-19,22;UBERON:0003978,9.94e-18,3;UBERON:0009751,9.94e-18,3;UBERON:0000946,9.94e-18,3;UBERON:0002523,9.94e-18,3;UBERON:0005983,9.94e-18,3;UBERON:0002165,9.94e-18,3;UBERON:0002062,9.94e-18,3;UBERON:0007280,9.94e-18,3;UBERON:0000956,7.33e-17,25;UBERON:0000203,7.33e-17,25;UBERON:0002146,3.50e-14,1;UBERON:0005623,3.50e-14,1;UBERON:0002780,6.73e-14,41;UBERON:0001890,6.73e-14,41;UBERON:0003080,6.73e-14,41;UBERON:0006240,6.73e-14,41;UBERON:0002134,1.10e-13,1;UBERON:0005208,1.10e-13,1;UBERON:0005946,1.10e-13,1;UBERON:0005965,1.10e-13,1;UBERON:0002078,1.10e-13,1;UBERON:0002791,3.17e-13,32;UBERON:0001869,3.17e-13,32;UBERON:0003528,1.88e-12,34;UBERON:0002020,1.88e-12,34;UBERON:0001893,1.88e-12,34;UBERON:0003075,4.05e-11,82;UBERON:0007284,4.05e-11,82;UBERON:0001872,4.12e-11,5;UBERON:0000073,1.10e-10,53;UBERON:0002616,1.10e-10,53;UBERON:0002346,1.46e-10,86;UBERON:0001049,4.32e-10,56;UBERON:0005068,4.32e-10,56;UBERON:0006241,4.32e-10,56;UBERON:0007135,4.32e-10,56;UBERON:0007023,1.03e-09,114;UBERON:0003056,3.15e-09,61;UBERON:0000200,4.03e-09,6;UBERON:0010371,1.43e-08,104;UBERON:0010314,3.88e-08,132;UBERON:0004797,3.98e-08,7;UBERON:0000955,4.19e-08,68;UBERON:0006238,4.19e-08,68;UBERON:0001871,5.87e-08,6;UBERON:0007100,9.92e-08,27;UBERON:0002771,1.54e-07,2;UBERON:0001897,1.64e-07,2;UBERON:0010225,1.64e-07,2;UBERON:0002081,1.75e-07,2;UBERON:0002133,1.75e-07,2;UBERON:0010227,1.75e-07,2;UBERON:0001876,2.25e-07,2;UBERON:0002702,2.40e-07,2;UBERON:0001017,9.78e-07,81 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.387336002901508,1.13735385989937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0,0,0,0.103052529238439,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.356857977594324,0.473107245101804,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,1.1253553312841,0,0,0,1.39473591775749,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.361789315876224,0,0.442317039724898,0,0,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0,1.82454789215666,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0.410716136675979,0,0,0,0.279282401272254,2.52076466412852,1.43574604915363,0.798716001995964,2.57535628881943,0,1.67958681216816,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0.160753148465019,0,0,0,0,0.425246896606173,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.226624183040251,0,0,0.517131825446202,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,1.001527445652,0,0.332787154610557,0.372578417648301,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0.107824811396682,0,0.436838552768056,0,0.637724760305049,0,0,0,0,0,0,0,0.449604575675217,0,1.75597244962866,0.41023272848151,0.504143392443436,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.337687923091973,0,2.06686796501184,0.443910671357348,2.18789923607288,0,0.496211178389294,0,0,0,0,0,0.455324382702595,0,0,0,0.203909198930495,0,0,0,0,0.471346769748006,0,0.913158720509496,0,0,0.571812353413251,0.158013611732727,0,0,0,0.207216164163037,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.219881033490858,0,0.154348316215889,0.218559560503957,0,1.22574160876953,0,0.392616934229891,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,1.65833887891756,0.20686599172379,0.213233981900981,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0.665320713092027,0,0,0,0,2.34640942403454,0.366724332548599,0,0,0,0 | |||
|short_description=p@chr12:2300597..2300606,+ | |||
}} |
Revision as of 11:28, 11 January 2014
Short description: | p@chr12:2300597..2300606, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:2300597..2300606, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 5.85e-14 | 1 |
mature B cell | 1.28e-07 | 2 |
pre-B-II cell | 1.28e-07 | 2 |
transitional stage B cell | 1.28e-07 | 2 |
small pre-B-II cell | 1.28e-07 | 2 |
immature B cell | 1.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.85e-14 | 1 |
lymphosarcoma | 5.85e-14 | 1 |
heart disease | 9.25e-08 | 2 |