FFCP PHASE1:Hg19::chr12:7053201..7053222,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=113246 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29521 | |||
|TSSclassifier=strong | |||
|UniProt=Q99622 | |||
|association_with_transcript=0bp_to_NM_138425,uc001qrz.2_5end | |||
|description=CAGE_peak_3_at_C12orf57_5end | |||
|id=chr12:7053201..7053222,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.11e-29!180;CL:0000183!4.14e-21!59;CL:0000393!1.22e-20!60;CL:0000211!1.22e-20!60;CL:0000187!3.11e-19!54;CL:0000680!9.55e-19!57;CL:0000056!9.55e-19!57;CL:0000355!9.55e-19!57;CL:0000192!1.27e-18!42;CL:0000514!1.27e-18!42;CL:0000222!1.63e-17!119;CL:0000359!2.43e-15!32;CL:0000220!5.14e-12!246;CL:0002321!5.56e-12!248;CL:0000057!1.02e-07!75;CL:0000327!4.90e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.04e-14;32!CL:0000192;1.25e-12;43!CL:0000187;1.92e-10;55!CL:0000393;2.72e-10;61!CL:0000211;2.72e-10;61!CL:0000327;3.39e-07;15!CL:0000723;8.47e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.10e-20,61;CL:0000211,4.10e-20,61;CL:0000187,1.07e-18,55;CL:0000680,3.05e-18,58;CL:0000056,3.05e-18,58;CL:0000355,3.05e-18,58;CL:0000192,5.51e-18,43;CL:0000514,5.51e-18,43;CL:0000222,1.69e-17,121;CL:0000359,2.42e-15,32;CL:0002321,4.40e-12,250;CL:0000057,6.83e-08,76;CL:0000327,3.55e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.25e-12;43!CL:0000355;6.94e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.63e-18!84;UBERON:0001134!1.54e-17!61;UBERON:0002036!1.54e-17!61;UBERON:0003082!1.54e-17!61;UBERON:0002049!2.89e-17!79;UBERON:0007798!2.89e-17!79;UBERON:0004290!7.74e-17!70;UBERON:0000486!7.84e-17!82;UBERON:0002385!1.59e-16!63;UBERON:0001015!1.59e-16!63;UBERON:0000383!1.59e-16!63;UBERON:0000914!2.64e-16!83;UBERON:0002329!2.64e-16!83;UBERON:0003077!2.64e-16!83;UBERON:0003059!2.64e-16!83;UBERON:0007282!2.64e-16!83;UBERON:0009618!2.64e-16!83;UBERON:0007285!2.64e-16!83;UBERON:0003914!5.18e-16!118;UBERON:0000055!6.33e-15!69;UBERON:0005256!1.30e-14!143;UBERON:0001981!1.42e-14!60;UBERON:0007500!1.42e-14!60;UBERON:0004537!1.42e-14!60;UBERON:0006965!1.42e-14!60;UBERON:0001637!4.17e-14!42;UBERON:0003509!4.17e-14!42;UBERON:0004572!4.17e-14!42;UBERON:0002100!5.42e-14!216;UBERON:0001009!1.86e-13!113;UBERON:0004535!6.94e-13!110;UBERON:0000490!2.07e-12!138;UBERON:0000481!1.04e-11!347;UBERON:0003104!1.05e-11!238;UBERON:0009142!1.05e-11!238;UBERON:0000119!1.30e-11!312;UBERON:0000477!1.56e-11!286;UBERON:0000483!3.42e-11!309;UBERON:0004573!3.73e-11!33;UBERON:0004571!3.73e-11!33;UBERON:0000475!5.54e-10!365;UBERON:0000025!7.15e-09!194;UBERON:0004111!2.65e-08!241;UBERON:0007100!1.61e-07!27;UBERON:0000948!5.50e-07!24;UBERON:0005498!5.50e-07!24;UBERON:0004140!5.50e-07!24;UBERON:0009881!5.50e-07!24;UBERON:0004141!5.50e-07!24;UBERON:0003084!5.50e-07!24;UBERON:0007005!5.50e-07!24;UBERON:0004139!5.50e-07!24;UBERON:0004291!5.50e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.10e-10;33!UBERON:0004571;4.10e-10;33!UBERON:0001637;8.30e-10;42!UBERON:0003509;8.30e-10;42!UBERON:0004572;8.30e-10;42!UBERON:0007500;9.52e-08;56!UBERON:0001981;9.52e-08;56!UBERON:0004537;9.52e-08;56!UBERON:0002049;7.20e-07;75!UBERON:0007798;7.20e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,9.07e-19,78;UBERON:0004872,2.60e-18,83;UBERON:0001134,4.37e-17,62;UBERON:0002036,4.37e-17,62;UBERON:0003082,4.37e-17,62;UBERON:0002049,4.57e-17,78;UBERON:0007798,4.57e-17,78;UBERON:0007524,1.74e-16,73;UBERON:0000486,1.75e-16,83;UBERON:0002329,1.91e-16,71;UBERON:0003059,1.91e-16,71;UBERON:0007282,1.91e-16,71;UBERON:0004290,1.91e-16,71;UBERON:0009618,1.91e-16,71;UBERON:0003914,2.82e-16,117;UBERON:0002385,4.17e-16,64;UBERON:0001015,4.17e-16,64;UBERON:0000383,4.17e-16,64;UBERON:0003077,5.72e-16,72;UBERON:0007285,5.72e-16,72;UBERON:0003104,3.23e-15,160;UBERON:0009142,3.23e-15,160;UBERON:0005256,4.91e-15,122;UBERON:0000055,9.91e-15,68;UBERON:0007500,2.21e-14,59;UBERON:0001981,2.21e-14,59;UBERON:0004537,2.21e-14,59;UBERON:0006965,2.21e-14,59;UBERON:0001637,4.16e-14,42;UBERON:0003509,4.16e-14,42;UBERON:0004572,4.16e-14,42;UBERON:0002100,6.58e-14,199;UBERON:0001009,2.89e-13,112;UBERON:0004535,1.07e-12,109;UBERON:0000490,2.02e-12,148;UBERON:0000119,1.38e-11,309;UBERON:0000483,3.62e-11,306;UBERON:0004573,3.72e-11,33;UBERON:0004571,3.72e-11,33;UBERON:0000025,6.60e-09,192;UBERON:0004111,1.34e-08,240;UBERON:0007100,1.61e-07,27;UBERON:0000948,5.49e-07,24;UBERON:0005498,5.49e-07,24;UBERON:0004140,5.49e-07,24;UBERON:0009881,5.49e-07,24;UBERON:0004141,5.49e-07,24;UBERON:0003084,5.49e-07,24;UBERON:0007005,5.49e-07,24;UBERON:0004139,5.49e-07,24;UBERON:0004291,5.49e-07,24 | |||
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| |||
|short_description=p3@C12orf57 | |||
}} |
Revision as of 11:50, 11 January 2014
Short description: | p3@C12orf57 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C12orf57_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_138425, uc001qrz.2_5end |
EntrezGene: | C12orf57 |
HGNC: | 29521 |
UniProt: | Q99622 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.10e-20 | 61 |
electrically active cell | 4.10e-20 | 61 |
muscle cell | 1.07e-18 | 55 |
muscle precursor cell | 3.05e-18 | 58 |
myoblast | 3.05e-18 | 58 |
multi-potent skeletal muscle stem cell | 3.05e-18 | 58 |
smooth muscle cell | 5.51e-18 | 43 |
smooth muscle myoblast | 5.51e-18 | 43 |
mesodermal cell | 1.69e-17 | 121 |
vascular associated smooth muscle cell | 2.42e-15 | 32 |
embryonic cell | 4.40e-12 | 250 |
fibroblast | 6.83e-08 | 76 |
extracellular matrix secreting cell | 3.55e-07 | 15 |