FFCP PHASE1:Hg19::chr12:24013883..24013887,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_at_chr12:24013883..24013887,- | |||
|id=chr12:24013883..24013887,- | |||
|ontology_enrichment_celltype=CL:0002605!1.25e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;7.62e-26;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!9.88e-13!33;UBERON:0002020!2.93e-12!34;UBERON:0003528!2.93e-12!34;UBERON:0001893!2.93e-12!34;UBERON:0001869!1.77e-11!32;UBERON:0002780!5.62e-11!41;UBERON:0001890!5.62e-11!41;UBERON:0006240!5.62e-11!41;UBERON:0003080!1.25e-10!42;UBERON:0000956!1.11e-09!25;UBERON:0000203!1.11e-09!25;UBERON:0003056!4.19e-08!61;UBERON:0001049!6.88e-08!57;UBERON:0005068!6.88e-08!57;UBERON:0006241!6.88e-08!57;UBERON:0007135!6.88e-08!57;UBERON:0000955!1.62e-07!69;UBERON:0006238!1.62e-07!69;UBERON:0002616!1.70e-07!59;UBERON:0000073!4.55e-07!94;UBERON:0001016!4.55e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;7.62e-26;1!UBERON:0001567;7.62e-26;1!UBERON:0001950;2.32e-19;20!UBERON:0000922;5.70e-18;49!UBERON:0002619;1.00e-17;22!UBERON:0000956;9.69e-16;25!UBERON:0000203;9.69e-16;25!UBERON:0001871;4.69e-15;6!UBERON:0001829;1.21e-13;2!UBERON:0004089;1.21e-13;2!UBERON:0002791;3.40e-12;32!UBERON:0001869;4.97e-12;32!UBERON:0003528;4.32e-11;34!UBERON:0002020;4.32e-11;34!UBERON:0002114;1.19e-09;2!UBERON:0001893;1.42e-09;34!UBERON:0002780;3.50e-09;41!UBERON:0001890;3.50e-09;41!UBERON:0002346;1.80e-07;4!UBERON:0000923;1.80e-07;4!UBERON:0010316;1.80e-07;4!UBERON:0005291;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,1.26e-25,1;UBERON:0001567,1.26e-25,1;UBERON:0008801,1.26e-25,1;UBERON:0001950,2.44e-19,20;UBERON:0002619,1.05e-17,22;UBERON:0000956,1.01e-15,25;UBERON:0000203,1.01e-15,25;UBERON:0001871,5.04e-15,6;UBERON:0001829,1.55e-13,2;UBERON:0004089,1.55e-13,2;UBERON:0002791,1.72e-12,32;UBERON:0001869,1.72e-12,32;UBERON:0003528,8.37e-12,34;UBERON:0002020,8.37e-12,34;UBERON:0001893,8.37e-12,34;UBERON:0002780,6.58e-10,41;UBERON:0001890,6.58e-10,41;UBERON:0003080,6.58e-10,41;UBERON:0006240,6.58e-10,41;UBERON:0002114,1.19e-09,2;UBERON:0000073,8.61e-08,53;UBERON:0002616,8.61e-08,53;UBERON:0001049,2.12e-07,56;UBERON:0005068,2.12e-07,56;UBERON:0006241,2.12e-07,56;UBERON:0007135,2.12e-07,56;UBERON:0002346,2.29e-07,86;UBERON:0003056,7.88e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.684372125364421,0.251085279189606,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741383633679017,0.208843899010911,0,0,0,0,0,0,0,1.20990716048664,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.189932387867636,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0.472699093843342,0.576911008668165,0.606631894687664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0.243585196761792,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,1.73510069962603,0,0,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,3.02486035466062,0,0.645902582527404,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.655087670040387,0,0,0,0,0.0634158101939068,5.4697480901822,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0.697448552208751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.397901550322736,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,2.18175345170189,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0.103432995861895,0.426467963801962,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p@chr12:24013883..24013887,- | |||
}} |
Revision as of 12:39, 11 January 2014
Short description: | p@chr12:24013883..24013887, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:24013883..24013887, - |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parotid gland | 1.26e-25 | 1 |
cheek | 1.26e-25 | 1 |
parotid gland primordium | 1.26e-25 | 1 |
neocortex | 2.44e-19 | 20 |
regional part of cerebral cortex | 1.05e-17 | 22 |
cerebral cortex | 1.01e-15 | 25 |
pallium | 1.01e-15 | 25 |
temporal lobe | 5.04e-15 | 6 |
major salivary gland | 1.55e-13 | 2 |
midface | 1.55e-13 | 2 |
regional part of telencephalon | 1.72e-12 | 32 |
cerebral hemisphere | 1.72e-12 | 32 |
brain grey matter | 8.37e-12 | 34 |
gray matter | 8.37e-12 | 34 |
telencephalon | 8.37e-12 | 34 |
regional part of forebrain | 6.58e-10 | 41 |
forebrain | 6.58e-10 | 41 |
anterior neural tube | 6.58e-10 | 41 |
future forebrain | 6.58e-10 | 41 |
duodenum | 1.19e-09 | 2 |
regional part of nervous system | 8.61e-08 | 53 |
regional part of brain | 8.61e-08 | 53 |
neural tube | 2.12e-07 | 56 |
neural rod | 2.12e-07 | 56 |
future spinal cord | 2.12e-07 | 56 |
neural keel | 2.12e-07 | 56 |
neurectoderm | 2.29e-07 | 86 |
pre-chordal neural plate | 7.88e-07 | 61 |