FFCP PHASE1:Hg19::chr13:53314077..53314084,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=11061 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17005 | |||
|TSSclassifier=strong | |||
|UniProt=O75829 | |||
|association_with_transcript=-130bp_to_ENST00000448904,NM_001011705,NM_007015,uc001vhf.2,uc001vhg.2,uc001vhh.2_5end | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_5_at_LECT1_5end | |||
|id=chr13:53314077..53314084,- | |||
|ontology_enrichment_celltype=CL:0002322!4.90e-45!5;CL:0000540!7.31e-14!6;CL:0000031!7.31e-14!6;CL:0000404!7.31e-14!6;CL:0000047!1.57e-10!8;CL:0000148!1.08e-08!10;CL:0000541!1.08e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.34e-163;5!CL:0002321;4.54e-55;15!CL:0000148;2.64e-30;10!CL:0000147;6.44e-22;14!CL:0000710;1.32e-15;20!CL:0000075;9.11e-12;27!CL:0002077;4.46e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.34e-163,5;CL:0000148,2.78e-30,10;CL:0000541,2.78e-30,10;CL:0000147,6.67e-22,14;CL:0000710,1.36e-15,20;CL:0000075,9.28e-12,27;CL:0002077,1.72e-09,34;CL:0000333,1.19e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!8.81e-20!4;UBERON:0002435!8.81e-20!4;UBERON:0000204!8.81e-20!4;UBERON:0010082!8.81e-20!4;UBERON:0009663!1.12e-19!7;UBERON:0001869!2.28e-15!32;UBERON:0002308!2.29e-15!9;UBERON:0002420!2.29e-15!9;UBERON:0000125!2.29e-15!9;UBERON:0007245!2.29e-15!9;UBERON:0010009!2.29e-15!9;UBERON:0010011!2.29e-15!9;UBERON:0000454!2.29e-15!9;UBERON:0002791!6.90e-15!33;UBERON:0002020!1.96e-14!34;UBERON:0003528!1.96e-14!34;UBERON:0001893!1.96e-14!34;UBERON:0005383!1.78e-12!3;UBERON:0005382!1.78e-12!3;UBERON:0002771!3.00e-12!3;UBERON:0002780!7.24e-12!41;UBERON:0001890!7.24e-12!41;UBERON:0006240!7.24e-12!41;UBERON:0003080!1.44e-11!42;UBERON:0001017!1.53e-10!82;UBERON:0001871!4.51e-10!7;UBERON:0001874!5.30e-10!1;UBERON:0005743!5.55e-10!86;UBERON:0001882!1.07e-09!1;UBERON:0005403!1.07e-09!1;UBERON:0000073!6.79e-09!94;UBERON:0001016!6.79e-09!94;UBERON:0001049!2.55e-08!57;UBERON:0005068!2.55e-08!57;UBERON:0006241!2.55e-08!57;UBERON:0007135!2.55e-08!57;UBERON:0002616!5.21e-08!59;UBERON:0003056!1.02e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.32e-14;49!UBERON:0002346;1.70e-09;4!UBERON:0000923;1.70e-09;4!UBERON:0010316;1.70e-09;4!UBERON:0005291;1.70e-09;4!UBERON:0002050;7.49e-08;5!UBERON:0005423;7.49e-08;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04934265323988,4.5060121229305,2.78865462886844,2.07322110030741,4.28945446488568,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.687697182986169,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98297222814403,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0.534434810531121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@LECT1 | |||
}} |
Revision as of 17:55, 11 January 2014
Short description: | p5@LECT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LECT1_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -130bp_to_ENST00000448904, NM_001011705, NM_007015, uc001vhf.2, uc001vhg.2, uc001vhh.2_5end |
EntrezGene: | LECT1 |
HGNC: | 17005 |
UniProt: | O75829 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.34e-163 | 5 |
melanocyte | 2.78e-30 | 10 |
melanoblast | 2.78e-30 | 10 |
pigment cell | 6.67e-22 | 14 |
neurecto-epithelial cell | 1.36e-15 | 20 |
columnar/cuboidal epithelial cell | 9.28e-12 | 27 |
ecto-epithelial cell | 1.72e-09 | 34 |
migratory neural crest cell | 1.19e-07 | 41 |