FFCP PHASE1:Hg19::chr13:76195729..76195745,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6646 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-84bp_to_BC148408_5end | |||
|coexpression_cluster_id=C1189 | |||
|description=CAGE_peak_49_at_LMO7_5end | |||
|id=chr13:76195729..76195745,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.08e-16!180;CL:0000057!5.20e-15!75;CL:0002620!7.26e-09!23;CL:0002580!2.30e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002617;1.12e-25;2!CL:0002580;8.38e-18;3!CL:0000511;9.72e-14;1!CL:0002625;9.72e-14;1!CL:0000222;9.72e-14;1!CL:0000216;9.72e-14;1!CL:0002334;5.22e-10;12!CL:0000136;3.60e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,1.12e-25,2;CL:0002580,5.05e-18,3;CL:0000511,6.65e-14,1;CL:0002625,6.65e-14,1;CL:0000216,6.65e-14,1;CL:0002334,3.84e-10,12;CL:0000136,5.51e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1192!7.86e-08!3 | |||
|ontology_enrichment_disease_v019=DOID:3369;3.73e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,3.50e-14,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.95e-20;10!UBERON:0001443;1.90e-18;11!UBERON:0001136;9.72e-14;1!UBERON:0001343;9.72e-14;1!UBERON:0004910;9.72e-14;1!UBERON:0004813;9.72e-14;1!UBERON:0003688;3.27e-09;6!UBERON:0002358;3.27e-09;6!UBERON:0003684;3.27e-09;6!UBERON:0001178;3.27e-09;6!UBERON:0004909;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.19e-20,10;UBERON:0001443,1.45e-18,11;UBERON:0001136,6.65e-14,1;UBERON:0001343,6.65e-14,1;UBERON:0004910,6.65e-14,1;UBERON:0005154,6.65e-14,1;UBERON:0005295,6.65e-14,1;UBERON:0004813,6.65e-14,1;UBERON:0005297,6.65e-14,1;UBERON:0005294,6.65e-14,1;UBERON:0010141,6.65e-14,1;UBERON:0005891,6.65e-14,1;UBERON:0003688,3.14e-09,6;UBERON:0002358,3.14e-09,6;UBERON:0003684,3.14e-09,6;UBERON:0001178,3.14e-09,6;UBERON:0004909,1.36e-07,2;UBERON:0004871,4.41e-07,8 | |||
|phase1_expression=1.81678379270557,1.07050261945492,1.12763523276777,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.759783069987479,2.25095607382472,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0.113432183160021,1.07633781413317,0.213557388818567,0,0,0.309157587715317,0,0,0.168776332241266,0.194874010322397,0.504867548488229,0.0920498986422993,0.484938170456436,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.517086863031111,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,1.15825045334063,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0.356857977594324,0.630809660135739,0.117141414992713,1.20378439891088,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,1.98486246255021,6.1384789315225,0.561320188866147,1.66580894032411,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25924938732256,0,0,0,0,0.18532421910392,0.143124886741991,0,0.632758849437452,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,0,1.20008329398946,0.686791410365586,0.336749488765919,1.26184898228651,0,0.857766365499703,0,0.226705925512272,0.463044948647668,0,0.537266523244462,0.308801447160972,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p49@LMO7 | |||
}} |
Revision as of 18:04, 11 January 2014
Short description: | p49@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_49_at_LMO7_5end |
Coexpression cluster: | C1189_Preadipocyte_Fibroblast_Ewing_mesodermal_Adipocyte_Smooth_osteoclastoma |
Association with transcript: | -84bp_to_BC148408_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 1.12e-25 | 2 |
preadipocyte of the breast | 5.05e-18 | 3 |
androgen binding protein secreting cell | 6.65e-14 | 1 |
seminiferous tubule epithelial cell | 6.65e-14 | 1 |
Sertoli cell | 6.65e-14 | 1 |
preadipocyte | 3.84e-10 | 12 |
fat cell | 5.51e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
breast | 2.19e-20 | 10 |
chest | 1.45e-18 | 11 |
mesothelium | 6.65e-14 | 1 |
seminiferous tubule of testis | 6.65e-14 | 1 |
epithelium of male gonad | 6.65e-14 | 1 |
epithelial cord | 6.65e-14 | 1 |
sex cord | 6.65e-14 | 1 |
seminiferous tubule epithelium | 6.65e-14 | 1 |
testis sex cord | 6.65e-14 | 1 |
genital ridge | 6.65e-14 | 1 |
primitive sex cord of indifferent gonad | 6.65e-14 | 1 |
coelomic epithelium | 6.65e-14 | 1 |
omentum | 3.14e-09 | 6 |
peritoneum | 3.14e-09 | 6 |
abdominal cavity | 3.14e-09 | 6 |
visceral peritoneum | 3.14e-09 | 6 |
epithelium of gonad | 1.36e-07 | 2 |
somatic layer of lateral plate mesoderm | 4.41e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 3.50e-14 | 1 |