FFCP PHASE1:Hg19::chr14:52164675..52164686,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=122786 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |||
|TSSclassifier=strong | |||
|UniProt=G3V3V8 | |||
|association_with_transcript=-19bp_to_ENST00000555936_5end | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_36_at_FRMD6_5end | |||
|id=chr14:52164675..52164686,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;7.62e-26;1!UBERON:0007297;1.21e-13;2!UBERON:0009847;1.53e-09;3!UBERON:0003353;1.53e-09;3!UBERON:0006603;2.24e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.22e-29!3;UBERON:0004054!1.22e-29!3;UBERON:0005904!2.09e-22!4;UBERON:0007023!3.20e-16!115;UBERON:0003135!3.40e-14!11;UBERON:0004175!1.82e-13!25;UBERON:0005156!6.68e-12!59;UBERON:0000990!6.68e-12!59;UBERON:0003133!9.00e-12!48;UBERON:0006834!2.79e-11!1;UBERON:0001000!3.41e-11!1;UBERON:0005352!3.41e-11!1;UBERON:0000998!4.15e-11!1;UBERON:0006868!4.15e-11!1;UBERON:0001301!6.77e-11!1;UBERON:0003101!8.19e-11!22;UBERON:0000079!8.19e-11!22;UBERON:0001052!1.40e-10!4;UBERON:0004907!1.22e-08!5;UBERON:0000059!2.00e-08!11;UBERON:0001046!2.35e-08!19;UBERON:0005795!3.49e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.27e-33;3!UBERON:0004054;1.27e-33;3!UBERON:0006834;2.78e-26;1!UBERON:0001000;7.62e-26;1!UBERON:0000998;7.62e-26;1!UBERON:0006868;7.62e-26;1!UBERON:0005352;7.62e-26;1!UBERON:0005904;1.62e-25;4!UBERON:0004175;2.94e-19;21!UBERON:0001255;1.21e-13;2!UBERON:0001556;1.21e-13;2!UBERON:0000058;7.67e-11;10!UBERON:0003101;9.07e-11;22!UBERON:0000079;9.07e-11;22!UBERON:0003135;6.06e-10;11!UBERON:0003937;3.41e-09;12!UBERON:0005399;3.41e-09;12!UBERON:0001052;1.49e-07;4!UBERON:0000995;8.34e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,9.10e-34,3;UBERON:0004054,9.10e-34,3;UBERON:0006834,2.78e-26,1;UBERON:0001000,4.61e-26,1;UBERON:0005352,4.61e-26,1;UBERON:0000998,7.62e-26,1;UBERON:0006868,7.62e-26,1;UBERON:0005904,1.26e-25,4;UBERON:0004175,2.79e-16,25;UBERON:0001255,1.07e-13,2;UBERON:0001556,1.07e-13,2;UBERON:0001046,2.15e-12,19;UBERON:0003101,9.07e-11,22;UBERON:0000079,9.07e-11,22;UBERON:0005156,1.03e-10,59;UBERON:0000990,1.03e-10,59;UBERON:0007023,1.17e-10,114;UBERON:0003135,5.54e-10,11;UBERON:0003937,3.70e-09,12;UBERON:0005399,3.70e-09,12;UBERON:0003133,1.08e-08,48;UBERON:0003064,1.37e-08,28;UBERON:0000162,5.36e-08,14;UBERON:0001353,5.36e-08,14;UBERON:0000163,5.36e-08,14;UBERON:0006866,5.36e-08,14;UBERON:0000164,5.36e-08,14;UBERON:0000931,5.36e-08,14;UBERON:0001052,1.49e-07,4;UBERON:0004122,1.59e-07,15 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67693789582787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0.707660516026713,0,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,1.0989032999072,0,0,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,4.16752146981639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,3.30051899293739,0.813792356631477,0,0,0 | |||
|short_description=p36@FRMD6 | |||
}} |
Revision as of 20:04, 11 January 2014
Short description: | p36@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_36_at_FRMD6_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -19bp_to_ENST00000555936_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | G3V3V8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 9.10e-34 | 3 |
internal male genitalia | 9.10e-34 | 3 |
uterus or analog | 2.78e-26 | 1 |
vas deferens | 4.61e-26 | 1 |
spermatic cord | 4.61e-26 | 1 |
seminal vesicle | 7.62e-26 | 1 |
seminal fluid secreting gland | 7.62e-26 | 1 |
duct of male reproductive system | 1.26e-25 | 4 |
internal genitalia | 2.79e-16 | 25 |
urinary bladder | 1.07e-13 | 2 |
lower urinary tract | 1.07e-13 | 2 |
hindgut | 2.15e-12 | 19 |
male organism | 9.07e-11 | 22 |
male reproductive system | 9.07e-11 | 22 |
reproductive structure | 1.03e-10 | 59 |
reproductive system | 1.03e-10 | 59 |
adult organism | 1.17e-10 | 114 |
male reproductive organ | 5.54e-10 | 11 |
sex gland | 3.70e-09 | 12 |
male reproductive gland | 3.70e-09 | 12 |
reproductive organ | 1.08e-08 | 48 |
intermediate mesoderm | 1.37e-08 | 28 |
cloaca | 5.36e-08 | 14 |
anal region | 5.36e-08 | 14 |
embryonic cloaca | 5.36e-08 | 14 |
terminal part of digestive tract | 5.36e-08 | 14 |
primitive urogenital sinus | 5.36e-08 | 14 |
proctodeum | 5.36e-08 | 14 |
rectum | 1.49e-07 | 4 |
genitourinary system | 1.59e-07 | 15 |