FFCP PHASE1:Hg19::chr14:61929781..61929801,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5583 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9403 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000555233_5end | |||
|description=CAGE_peak_27_at_PRKCH_5end | |||
|id=chr14:61929781..61929801,+ | |||
|ontology_enrichment_celltype=CL:0000680!8.02e-17!57;CL:0000056!8.02e-17!57;CL:0000355!8.02e-17!57;CL:0000187!1.92e-13!54;CL:0000183!8.41e-12!59;CL:0000393!1.66e-11!60;CL:0000211!1.66e-11!60;CL:0000055!1.77e-11!180;CL:0000222!4.63e-08!119;CL:0000188!2.12e-07!9;CL:0000064!2.49e-07!3;CL:0005012!2.49e-07!3;CL:0000067!2.49e-07!3;CL:0002304!2.49e-07!3;CL:0000359!3.01e-07!32;CL:0000192!6.19e-07!42;CL:0000514!6.19e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000746;4.05e-25;3!CL:0000342;3.56e-19;1!CL:0002565;3.56e-19;1!CL:0000737;4.10e-19;4!CL:0002494;2.44e-18;16!CL:0002548;6.90e-13;6!CL:0002262;1.80e-10;2!CL:1000398;1.80e-10;2!CL:0002593;2.85e-10;2!CL:0002521;2.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,5.50e-25,3;CL:0000513,5.50e-25,3;CL:0000342,2.25e-19,1;CL:0002565,2.25e-19,1;CL:0000737,5.15e-19,4;CL:0002494,2.49e-18,16;CL:0002548,6.12e-13,6;CL:0002262,1.57e-10,2;CL:1000398,1.57e-10,2;CL:0002593,2.99e-10,2;CL:0002521,2.19e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000513;4.05e-25;3!UBERON:0004140;3.56e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!2.94e-15!61;UBERON:0002036!2.94e-15!61;UBERON:0003082!2.94e-15!61;UBERON:0004290!4.40e-15!70;UBERON:0000914!4.63e-15!83;UBERON:0002329!4.63e-15!83;UBERON:0003077!4.63e-15!83;UBERON:0003059!4.63e-15!83;UBERON:0007282!4.63e-15!83;UBERON:0009618!4.63e-15!83;UBERON:0007285!4.63e-15!83;UBERON:0002385!1.49e-14!63;UBERON:0001015!1.49e-14!63;UBERON:0000383!1.49e-14!63;UBERON:0000486!8.23e-13!82;UBERON:0005256!3.81e-11!143;UBERON:0000488!1.50e-09!4;UBERON:0002200!6.41e-09!11;UBERON:0006876!6.41e-09!11;UBERON:0000481!8.99e-09!347;UBERON:0000490!1.08e-08!138;UBERON:0002100!8.38e-08!216;UBERON:0004535!1.40e-07!110;UBERON:0003104!2.37e-07!238;UBERON:0009142!2.37e-07!238;UBERON:0001778!2.49e-07!3;UBERON:0001775!2.49e-07!3;UBERON:0001009!3.33e-07!113;UBERON:0002049!9.45e-07!79;UBERON:0007798!9.45e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.73e-20;22!UBERON:0002506;3.56e-19;1!UBERON:0001769;3.56e-19;1!UBERON:0007100;4.72e-18;25!UBERON:0003513;2.69e-11;7!UBERON:0001281;1.80e-10;2!UBERON:0003497;1.80e-10;2!UBERON:0003909;1.80e-10;2!UBERON:0003835;1.80e-10;2!UBERON:0002456;2.85e-10;2!UBERON:0002190;2.12e-07;3!UBERON:0001280;2.12e-07;3!UBERON:0004647;2.12e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,2.25e-19,1;UBERON:0001769,2.25e-19,1;UBERON:0000948,9.16e-19,24;UBERON:0005498,9.16e-19,24;UBERON:0004140,9.16e-19,24;UBERON:0009881,9.16e-19,24;UBERON:0004141,9.16e-19,24;UBERON:0003084,9.16e-19,24;UBERON:0007005,9.16e-19,24;UBERON:0004139,9.16e-19,24;UBERON:0004291,9.16e-19,24;UBERON:0007100,1.07e-16,27;UBERON:0003513,2.55e-11,7;UBERON:0001281,1.57e-10,2;UBERON:0003497,1.57e-10,2;UBERON:0003909,1.57e-10,2;UBERON:0003835,1.57e-10,2;UBERON:0004872,2.65e-10,83;UBERON:0002456,2.99e-10,2;UBERON:0004535,4.25e-10,109;UBERON:0001009,8.18e-10,112;UBERON:0001280,1.93e-07,3;UBERON:0004647,1.93e-07,3;UBERON:0005171,1.93e-07,3;UBERON:0002190,2.19e-07,3;UBERON:0003914,3.40e-07,117 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,2.53299878168311,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,1.02290049474824,0,0,0,0,0,0.283604451492204,0.665188192387692,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,1.24484414159907,1.34710672069688,0.817309515567294,0.151357427644931,0,0,0.312160076830321,0,0.448346041655403,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,2.80483547606892,0,0,0,0,0,0,0,1.71567810298526,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66004457238855,0,0,2.535908257668,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0.65147236858747,0.355391948742546,2.37585561880029,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0,0,0.246381468041427,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.322260734604821,0,0.170453254832202,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0,0.632758849437452,0.190630193923825,0,0,0.636406495851874,0,0.359744915166629,0.274537029736055,0,0.606547444719948,0,0,0,1.21856744815642,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,1.20930250476107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0.406870733204662,0.363697318405119,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p27@PRKCH | |||
}} |
Revision as of 20:25, 11 January 2014
Short description: | p27@PRKCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_PRKCH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000555233_5end |
EntrezGene: | PRKCH |
HGNC: | 9403 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 5.50e-25 | 3 |
cardiac muscle myoblast | 5.50e-25 | 3 |
pigment cell (sensu Vertebrata) | 2.25e-19 | 1 |
iris pigment epithelial cell | 2.25e-19 | 1 |
striated muscle cell | 5.15e-19 | 4 |
cardiocyte | 2.49e-18 | 16 |
cardiac fibroblast | 6.12e-13 | 6 |
endothelial cell of sinusoid | 1.57e-10 | 2 |
endothelial cell of hepatic sinusoid | 1.57e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 2.99e-10 | 2 |
subcutaneous fat cell | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 2.25e-19 | 1 |
iris | 2.25e-19 | 1 |
heart | 9.16e-19 | 24 |
primitive heart tube | 9.16e-19 | 24 |
primary heart field | 9.16e-19 | 24 |
anterior lateral plate mesoderm | 9.16e-19 | 24 |
heart tube | 9.16e-19 | 24 |
heart primordium | 9.16e-19 | 24 |
cardiac mesoderm | 9.16e-19 | 24 |
cardiogenic plate | 9.16e-19 | 24 |
heart rudiment | 9.16e-19 | 24 |
primary circulatory organ | 1.07e-16 | 27 |
trunk blood vessel | 2.55e-11 | 7 |
hepatic sinusoid | 1.57e-10 | 2 |
abdomen blood vessel | 1.57e-10 | 2 |
sinusoid | 1.57e-10 | 2 |
abdominal segment blood vessel | 1.57e-10 | 2 |
splanchnic layer of lateral plate mesoderm | 2.65e-10 | 83 |
internal thoracic artery | 2.99e-10 | 2 |
cardiovascular system | 4.25e-10 | 109 |
circulatory system | 8.18e-10 | 112 |
liver parenchyma | 1.93e-07 | 3 |
liver lobule | 1.93e-07 | 3 |
hepatic duct | 1.93e-07 | 3 |
subcutaneous adipose tissue | 2.19e-07 | 3 |
epithelial tube | 3.40e-07 | 117 |