FFCP PHASE1:Hg19::chr14:75078867..75078893,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4053 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6715 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000557425_5end | |||
|coexpression_cluster_id=C3453 | |||
|description=CAGE_peak_4_at_LTBP2_5end | |||
|id=chr14:75078867..75078893,- | |||
|ontology_enrichment_celltype=CL:0000055!1.08e-29!180;CL:0000057!4.49e-20!75;CL:0000183!2.10e-15!59;CL:0000680!3.26e-15!57;CL:0000056!3.26e-15!57;CL:0000355!3.26e-15!57;CL:0000222!3.62e-15!119;CL:0000187!1.12e-13!54;CL:0000192!6.67e-12!42;CL:0000514!6.67e-12!42;CL:0000359!8.23e-12!32;CL:0000393!1.21e-11!60;CL:0000211!1.21e-11!60;CL:0002371!1.52e-10!591;CL:0000220!2.90e-09!246;CL:0002321!4.09e-09!248;CL:0002620!1.19e-08!23;CL:0000144!1.30e-08!625;CL:0002334!2.96e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.40e-12;32!CL:0002620;1.09e-09;23!CL:0000192;5.75e-09;43!CL:0002334;5.91e-09;12!CL:0000057;6.09e-09;73!CL:0000134;5.32e-08;55!CL:0002320;1.06e-07;188!CL:0000187;1.62e-07;55!CL:0000048;1.74e-07;58!CL:0000723;1.76e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.01e-23,76;CL:0000680,3.01e-15,58;CL:0000056,3.01e-15,58;CL:0000355,3.01e-15,58;CL:0000222,4.67e-15,121;CL:0000187,1.34e-13,55;CL:0000359,1.97e-12,32;CL:0000192,1.45e-11,43;CL:0000514,1.45e-11,43;CL:0000393,6.26e-11,61;CL:0000211,6.26e-11,61;CL:0002620,1.34e-09,23;CL:0002334,5.30e-09,12;CL:0002321,1.30e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000514;5.75e-09;43!CL:0000355;3.93e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!5.89e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.71e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.79e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!5.43e-22!79;UBERON:0007798!5.43e-22!79;UBERON:0004872!1.03e-21!84;UBERON:0001981!3.16e-19!60;UBERON:0007500!3.16e-19!60;UBERON:0004537!3.16e-19!60;UBERON:0006965!3.16e-19!60;UBERON:0000055!7.21e-19!69;UBERON:0000914!7.15e-18!83;UBERON:0002329!7.15e-18!83;UBERON:0003077!7.15e-18!83;UBERON:0003059!7.15e-18!83;UBERON:0007282!7.15e-18!83;UBERON:0009618!7.15e-18!83;UBERON:0007285!7.15e-18!83;UBERON:0003914!1.09e-17!118;UBERON:0001637!1.75e-17!42;UBERON:0003509!1.75e-17!42;UBERON:0004572!1.75e-17!42;UBERON:0001009!2.65e-17!113;UBERON:0000486!9.12e-17!82;UBERON:0004535!1.22e-16!110;UBERON:0004290!1.02e-15!70;UBERON:0000468!1.00e-14!659;UBERON:0001134!1.10e-14!61;UBERON:0002036!1.10e-14!61;UBERON:0003082!1.10e-14!61;UBERON:0000475!1.81e-14!365;UBERON:0002385!1.89e-14!63;UBERON:0001015!1.89e-14!63;UBERON:0000383!1.89e-14!63;UBERON:0005256!3.13e-14!143;UBERON:0000119!3.72e-14!312;UBERON:0004573!5.76e-14!33;UBERON:0004571!5.76e-14!33;UBERON:0000483!1.23e-13!309;UBERON:0000467!1.54e-12!625;UBERON:0000480!2.57e-12!626;UBERON:0002100!3.81e-12!216;UBERON:0000490!1.33e-11!138;UBERON:0000477!8.11e-11!286;UBERON:0003102!1.39e-10!95;UBERON:0004111!3.46e-10!241;UBERON:0000947!9.13e-10!21;UBERON:0010191!9.13e-10!21;UBERON:0000481!6.29e-09!347;UBERON:0007100!4.38e-08!27;UBERON:0002199!7.32e-08!45;UBERON:0002416!7.32e-08!45;UBERON:0003104!1.12e-07!238;UBERON:0009142!1.12e-07!238;UBERON:0000948!1.70e-07!24;UBERON:0005498!1.70e-07!24;UBERON:0004140!1.70e-07!24;UBERON:0009881!1.70e-07!24;UBERON:0004141!1.70e-07!24;UBERON:0003084!1.70e-07!24;UBERON:0007005!1.70e-07!24;UBERON:0004139!1.70e-07!24;UBERON:0004291!1.70e-07!24;UBERON:0000025!2.15e-07!194;UBERON:0003103!4.55e-07!69;UBERON:0000479!7.25e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.05e-14;42!UBERON:0003509;2.05e-14;42!UBERON:0004572;2.05e-14;42!UBERON:0004573;2.88e-14;33!UBERON:0004571;2.88e-14;33!UBERON:0007500;8.52e-11;56!UBERON:0001981;8.52e-11;56!UBERON:0004537;8.52e-11;56!UBERON:0000947;1.06e-10;21!UBERON:0010191;1.06e-10;21!UBERON:0000055;1.64e-09;65!UBERON:0002049;3.00e-09;75!UBERON:0007798;3.00e-09;75!UBERON:0003914;7.44e-09;74!UBERON:0007100;5.38e-08;25!UBERON:0002384;2.35e-07;198!UBERON:0000948;2.56e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,8.59e-23,78;UBERON:0007798,8.59e-23,78;UBERON:0004872,1.99e-22,83;UBERON:0007500,1.18e-20,59;UBERON:0001981,1.18e-20,59;UBERON:0004537,1.18e-20,59;UBERON:0006965,1.18e-20,59;UBERON:0000055,5.90e-20,68;UBERON:0001637,2.94e-19,42;UBERON:0003509,2.94e-19,42;UBERON:0004572,2.94e-19,42;UBERON:0001009,4.16e-19,112;UBERON:0004535,2.27e-18,109;UBERON:0007503,3.85e-18,78;UBERON:0003914,9.59e-18,117;UBERON:0000486,2.55e-17,83;UBERON:0002329,4.65e-16,71;UBERON:0003059,4.65e-16,71;UBERON:0007282,4.65e-16,71;UBERON:0004290,4.65e-16,71;UBERON:0009618,4.65e-16,71;UBERON:0007524,6.95e-16,73;UBERON:0003077,1.67e-15,72;UBERON:0007285,1.67e-15,72;UBERON:0004573,2.39e-15,33;UBERON:0004571,2.39e-15,33;UBERON:0001134,7.19e-15,62;UBERON:0002036,7.19e-15,62;UBERON:0003082,7.19e-15,62;UBERON:0002385,2.67e-14,64;UBERON:0001015,2.67e-14,64;UBERON:0000383,2.67e-14,64;UBERON:0000490,3.63e-11,148;UBERON:0003102,5.90e-11,99;UBERON:0000947,1.11e-10,21;UBERON:0010191,1.11e-10,21;UBERON:0000119,6.61e-10,309;UBERON:0005256,6.85e-10,122;UBERON:0003104,1.81e-09,160;UBERON:0009142,1.81e-09,160;UBERON:0000483,1.89e-09,306;UBERON:0000926,3.02e-09,315;UBERON:0004120,3.02e-09,315;UBERON:0006603,3.02e-09,315;UBERON:0007100,8.19e-09,27;UBERON:0002199,1.02e-08,46;UBERON:0002416,1.02e-08,46;UBERON:0002100,3.14e-08,199;UBERON:0000948,3.69e-08,24;UBERON:0005498,3.69e-08,24;UBERON:0004140,3.69e-08,24;UBERON:0009881,3.69e-08,24;UBERON:0004141,3.69e-08,24;UBERON:0003084,3.69e-08,24;UBERON:0007005,3.69e-08,24;UBERON:0004139,3.69e-08,24;UBERON:0004291,3.69e-08,24;UBERON:0002097,1.42e-07,41;UBERON:0000479,2.49e-07,773 | |||
|phase1_expression=25.798329856419,21.4100523890983,21.8479326348755,13.009528785907,7.15137751083661,12.2127393374052,7.59899634504932,5.68547886084148,0.783556884599516,4.17747692052565,1.39560233594486,5.24259293112413,13.1883489114227,3.7129905888014,3.97676850873499,8.0679017574213,13.8619741445515,13.1455816269727,8.29485757943862,3.93987385845721,6.5280221198161,1.88072832886853,1.14494394852423,5.74872585306114,4.77062030460251,0,0,0,0,0,0,0.919421224478927,1.204823675113,1.10926203050036,0,0,0,0,0,0,0.447830948479849,0,1.28787783817093,0.436194716338694,0.377875943688809,0.727752183563449,0.232429036905685,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0.545812300115692,0.224723484445085,0,0,0,0.329851300186716,0.797854630486527,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,4.69490601792545,1.15076305659177,20.2405925335357,25.5682334424304,15.0640379719257,45.3312989819127,48.6634870302636,9.16987726491458,14.4124108350667,18.1818006384771,4.45328856692223,4.73583874780305,1.85392221392215,0,0,0,0,0,0,5.36658499890104,5.16140757063675,13.8856200643038,14.1326985481002,5.03399323451887,8.80377734208216,5.22487416342026,4.90991842421725,9.24992282985447,3.68192674041137,3.22263453687318,0,1.22031028774085,3.67663080345869,7.29127753093584,4.28638695763583,4.93964619777574,3.15312145353302,1.53316637465883,7.59412527654503,5.86245580577303,0,0,3.48875241714027,33.2971207635863,20.7674039129911,12.3140538156293,101.253327124331,19.861429403108,4.48542080113846,12.8098794875646,15.5400555502811,4.35695449559673,5.6578482269269,5.06731899651722,4.38936540170301,8.64263886719998,4.68642863667593,4.05808099879417,3.4228309292667,6.87463930538285,1.05691048779388,1.45685649931318,1.26405726032024,2.65400422631361,2.82518929817066,3.51307655997603,22.572054288359,15.5778165445491,3.64064544775211,4.31170885089743,2.02003336744879,3.1279629967991,2.49357703935765,14.0472838681868,12.8724874235588,14.2726155961267,5.44474479168101,43.7710711080823,11.7456563850212,17.3784158950841,56.1170349677832,14.7365116810968,39.9342837070725,21.4034384781328,56.2025186363417,31.4721526670672,39.3796687820819,14.6359338841256,21.0139873864455,54.6714772475586,11.7879954926339,5.4259389539356,5.9910864480622,2.18196896472668,3.44165514466805,0.243947412259191,0.132529768321485,0.232387885739037,0.10366105501537,0,0,6.25798129319264,9.00537313470039,4.14404764057442,12.5379340568634,2.88751792667834,0,0,0,0,0,0,0,0,0.38474715694639,1.4763109092493,7.01208869017229,4.115740113314,23.5213938216867,0,0.982827216677626,0,0,0,5.14703430895577,1.09750285408626,5.62008766288098,1.70899253099772,6.20342582562148,0.325808305310325,0,7.21656710126366,3.014190529352,32.7570256917942,0.721832238805369,1.38895653772983,1.14152491340759,0,0,0.738651018262192,0.702012795417713,1.33768046059855,1.87467667973554,3.69560682037491,4.11147782002921,2.5971971583826,3.19697332365358,5.75074018747817,0,0,0,0,0,0.126995788584338,0,0,3.4214489204541,0.616964956219941,0,0,3.81245686774226,4.79556075716608,4.91366515000365,31.9301137921711,0,5.071816515336,19.9453587438653,11.4408180602503,12.603161338845,2.83698264046557,10.1240428026118,0.57191197463259,2.17048642156577,3.29296134712308,3.90883421152482,1.06617584622764,10.2953743481346,3.01439377059586,9.58686804460323,4.29883862082845,0,0,0,3.83399768786532,1.14861935834114,28.5273810081437,18.242444640115,17.670963739333,21.4873155887875,0,0.197030760201927,0.215627574859517,0,1.77866236955724,1.30139853857622,1.54657762555539,0.502548796003046,0.637938751653163,0,0,0,2.08575535922538,5.50187573165645,2.98391526069709,6.65506756898583,8.02930449587228,11.0391690523754,8.55132329446806,15.6491971858414,29.562975527278,11.3820378421755,19.2625423575277,16.9619635058367,6.42938747063813,12.1396717626899,7.54915532383883,0,0,0,0.303127571446259,3.32870879020994,2.72151263996712,40.9377882900982,79.4933021632163,40.6957136927957,27.8061953884871,23.0268262080017,37.1572557841733,2.96836132889982,23.748292845609,50.9602151648675,15.6041596426237,14.5391240171414,18.9422916889734,0,9.02279116364782,0.368323955743585,4.82220682291348,0.910455840033585,1.44236856455367,0.902399225814824,1.84836809050595,2.35304930753057,5.84556898613043,4.3276167846079,7.96133688496276,6.63365450578411,4.75015015424707,12.3381802152231,11.3797503768418,9.53210570324221,1.01950509218015,0,3.58199607555485,0,0,0.769350375349168,7.21632220539353,3.90454073597164,3.40035338437484,0,0,1.72279661398852,2.60024098414608,11.2478750890912,6.18692597069581,1.07834031980251,3.53058451870098,4.41077031950498,3.33002759091648,3.0453505721988,3.83519823372454,23.2373613037985,3.96683796866347,8.26417289669956,7.01869918720213,2.8324178639554,1.39453664789186,73.9809015052004,13.940745403212,10.473141725987,9.04920251538937,19.1385258256516,14.6406133092097,3.14874750832381,0.74431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| |||
|short_description=p4@LTBP2 | |||
}} |
Revision as of 21:01, 11 January 2014
Short description: | p4@LTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LTBP2_5end |
Coexpression cluster: | C3453_Fibroblast_Smooth_Preadipocyte_aorta_Chondrocyte_spindle_mesenchymal |
Association with transcript: | 0bp_to_ENST00000557425_5end |
EntrezGene: | LTBP2 |
HGNC: | 6715 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.01e-23 | 76 |
muscle precursor cell | 3.01e-15 | 58 |
myoblast | 3.01e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.01e-15 | 58 |
mesodermal cell | 4.67e-15 | 121 |
muscle cell | 1.34e-13 | 55 |
vascular associated smooth muscle cell | 1.97e-12 | 32 |
smooth muscle cell | 1.45e-11 | 43 |
smooth muscle myoblast | 1.45e-11 | 43 |
electrically responsive cell | 6.26e-11 | 61 |
electrically active cell | 6.26e-11 | 61 |
skin fibroblast | 1.34e-09 | 23 |
preadipocyte | 5.30e-09 | 12 |
embryonic cell | 1.30e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.79e-08 | 14 |