FFCP PHASE1:Hg19::chr14:95088671..95088704,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr14:95088671..95088704,+ | |||
|id=chr14:95088671..95088704,+ | |||
|ontology_enrichment_celltype=CL:0002564!7.40e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000746;1.98e-14;3!CL:0000737;4.68e-11;4!CL:0000182;2.48e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.73e-14,3;CL:0000513,1.73e-14,3;CL:0000737,4.23e-11,4;CL:0000182,2.48e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000513;1.98e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.66e-31!115;UBERON:0001049!1.41e-15!57;UBERON:0005068!1.41e-15!57;UBERON:0006241!1.41e-15!57;UBERON:0007135!1.41e-15!57;UBERON:0003075!3.58e-13!86;UBERON:0007284!3.58e-13!86;UBERON:0005743!1.09e-12!86;UBERON:0001017!1.33e-12!82;UBERON:0002298!1.50e-12!8;UBERON:0002346!3.05e-12!90;UBERON:0000025!4.72e-12!194;UBERON:0002616!6.01e-12!59;UBERON:0002308!2.35e-11!9;UBERON:0000125!2.35e-11!9;UBERON:0000073!8.71e-11!94;UBERON:0001016!8.71e-11!94;UBERON:0004111!2.24e-10!241;UBERON:0000955!4.06e-10!69;UBERON:0006238!4.06e-10!69;UBERON:0003076!7.76e-10!15;UBERON:0003057!7.76e-10!15;UBERON:0000477!2.15e-09!286;UBERON:0002020!1.79e-08!34;UBERON:0003528!1.79e-08!34;UBERON:0003080!2.30e-08!42;UBERON:0001893!2.89e-08!34;UBERON:0000475!4.21e-08!365;UBERON:0009854!5.80e-08!23;UBERON:0009663!6.13e-08!7;UBERON:0000483!1.55e-07!309;UBERON:0002791!1.95e-07!33;UBERON:0002780!2.06e-07!41;UBERON:0001890!2.06e-07!41;UBERON:0006240!2.06e-07!41;UBERON:0000119!2.44e-07!312;UBERON:0002240!2.89e-07!3;UBERON:0006331!3.21e-07!3;UBERON:0001896!5.10e-07!3;UBERON:0005290!5.10e-07!3;UBERON:0010096!5.10e-07!3;UBERON:0005174!5.86e-07!5;UBERON:0001137!5.86e-07!5;UBERON:0008835!7.31e-07!22;UBERON:0003894!7.31e-07!22;UBERON:0002242!7.40e-07!3;UBERON:0003068!7.40e-07!3;UBERON:0002328!7.40e-07!3;UBERON:0004880!7.40e-07!3;UBERON:0009856!8.71e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.72e-13;19!UBERON:0006925;1.72e-13;19!UBERON:0002365;3.44e-11;31!UBERON:0002330;3.44e-11;31!UBERON:0000029;3.81e-11;1!UBERON:0002423;3.19e-10;25!UBERON:0000949;7.92e-09;43!UBERON:0005172;1.39e-07;52!UBERON:0005173;1.39e-07;52!UBERON:0002368;3.71e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.72e-13,19;UBERON:0006925,1.72e-13,19;UBERON:0008836,1.72e-13,19;UBERON:0008835,1.23e-11,22;UBERON:0003894,1.23e-11,22;UBERON:0002365,1.79e-11,31;UBERON:0002330,1.79e-11,31;UBERON:0000029,2.68e-11,1;UBERON:0009854,4.01e-11,23;UBERON:0000949,1.82e-10,45;UBERON:0007499,3.19e-10,25;UBERON:0009497,3.19e-10,25;UBERON:0000015,3.19e-10,25;UBERON:0002423,3.19e-10,25;UBERON:0006235,3.19e-10,25;UBERON:0004161,3.19e-10,25;UBERON:0002417,7.85e-10,60;UBERON:0000916,7.85e-10,60;UBERON:0009856,8.00e-10,26;UBERON:0005177,1.51e-08,101;UBERON:0005172,1.59e-08,54;UBERON:0005173,1.59e-08,54;UBERON:0002368,2.98e-07,35 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,1.34088328328186,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,0,0,0,0.144846518960824,0.795285947051099,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.5616111429859,38.3302614504274,18.9052770138049,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,1.69946265673865,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.547621515567972,0,0,0,0.837847203816763,0,0.717873024576814,0.199679000498991,0.429226048136571,0.223171457441873,0,0,0,0.551482276150566,0.576911008668165,0.337017719270924,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,1.10327990218877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8362828180343,11.9256200020999,0.258565912723101,0.79339561045614,0,0,0.106787412567695,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0.250381861413,2.29363678276028,0.332787154610557,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,7.03362610109783,0,0,0.147856086217045,0.0675375846183947,0,0.413373593002368,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0.981542335574726,0.297046400327086,0.4226557275834,0,0.0939839179798536,0,0,0.357107877211315,0,0,0,0,0.573358332605805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0,0.12729431655633,0,0.217716747896961,0,0,1.00411087549747,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:95088671..95088704,+ | |||
}} |
Revision as of 21:45, 11 January 2014
Short description: | p@chr14:95088671..95088704, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:95088671..95088704, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.73e-14 | 3 |
cardiac muscle myoblast | 1.73e-14 | 3 |
striated muscle cell | 4.23e-11 | 4 |
hepatocyte | 2.48e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.72e-13 | 19 |
digestive gland | 1.72e-13 | 19 |
liver bud | 1.72e-13 | 19 |
hepatic diverticulum | 1.23e-11 | 22 |
liver primordium | 1.23e-11 | 22 |
exocrine gland | 1.79e-11 | 31 |
exocrine system | 1.79e-11 | 31 |
lymph node | 2.68e-11 | 1 |
digestive tract diverticulum | 4.01e-11 | 23 |
endocrine system | 1.82e-10 | 45 |
epithelial sac | 3.19e-10 | 25 |
epithelium of foregut-midgut junction | 3.19e-10 | 25 |
anatomical boundary | 3.19e-10 | 25 |
hepatobiliary system | 3.19e-10 | 25 |
foregut-midgut junction | 3.19e-10 | 25 |
septum transversum | 3.19e-10 | 25 |
abdominal segment of trunk | 7.85e-10 | 60 |
abdomen | 7.85e-10 | 60 |
sac | 8.00e-10 | 26 |
trunk region element | 1.51e-08 | 101 |
abdomen element | 1.59e-08 | 54 |
abdominal segment element | 1.59e-08 | 54 |
endocrine gland | 2.98e-07 | 35 |