FFCP PHASE1:Hg19::chr15:42686383..42686405,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C348 | |||
|description=CAGE_peak_at_chr15:42686383..42686405,+ | |||
|id=chr15:42686383..42686405,+ | |||
|ontology_enrichment_celltype=CL:0000148!8.74e-45!10;CL:0000541!8.74e-45!10;CL:0000147!5.90e-32!14;CL:0000710!2.59e-22!20;CL:0002567!1.18e-17!3;CL:0000075!1.83e-16!27;CL:0002566!3.08e-14!1;CL:0002077!2.04e-13!33;CL:0000325!2.65e-11!39;CL:0002274!1.01e-10!5;CL:0000457!1.01e-10!5;CL:0002191!1.01e-10!5;CL:0000097!1.01e-10!5;CL:0000831!1.01e-10!5;CL:0002028!1.01e-10!5;CL:0000333!3.21e-10!41;CL:0000133!4.29e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.18e-45;10!CL:0000147;7.86e-33;14!CL:0002566;7.48e-30;1!CL:0000710;3.43e-23;20!CL:0000075;2.43e-17;27!CL:0002077;1.85e-12;34!CL:0002567;1.04e-10;3!CL:0000149;1.82e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.40e-45,10;CL:0000541,1.40e-45,10;CL:0000147,8.89e-33,14;CL:0002566,7.48e-30,1;CL:0000710,3.74e-23,20;CL:0000075,2.59e-17,27;CL:0002077,7.26e-14,34;CL:0000333,4.52e-11,41;CL:0002567,1.20e-10,3;CL:0000149,1.82e-08,4;CL:0000133,6.16e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.04e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007029!4.53e-14!1;UBERON:0001301!8.58e-14!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.73e-29;1!UBERON:0000014;2.35e-08;4!UBERON:0000966;6.21e-07;5!UBERON:0005388;6.21e-07;5!UBERON:0001802;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.78e-29,1;UBERON:0000014,2.11e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,10.8581399239609,0.763976851116555,1.17217447210047,0,3.80461723002297,5.1058319833466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28657779517981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:42686383..42686405,+ | |||
}} |
Revision as of 23:08, 11 January 2014
Short description: | p@chr15:42686383..42686405, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:42686383..42686405, + |
Coexpression cluster: | C348_Melanocyte_melanoma_retina_cervical_eye_carcinoid_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.40e-45 | 10 |
melanoblast | 1.40e-45 | 10 |
pigment cell | 8.89e-33 | 14 |
dark melanocyte | 7.48e-30 | 1 |
neurecto-epithelial cell | 3.74e-23 | 20 |
columnar/cuboidal epithelial cell | 2.59e-17 | 27 |
ecto-epithelial cell | 7.26e-14 | 34 |
migratory neural crest cell | 4.52e-11 | 41 |
light melanocyte | 1.20e-10 | 3 |
visual pigment cell | 1.82e-08 | 4 |
neurectodermal cell | 6.16e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
surface | 1.78e-29 | 1 |
zone of skin | 2.11e-08 | 4 |