FFCP PHASE1:Hg19::chr15:72490099..72490109,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=196996 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27287 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IUY3 | |||
|association_with_transcript=0bp_to_BC038451_5end | |||
|description=CAGE_peak_3_at_GRAMD2_5end | |||
|id=chr15:72490099..72490109,- | |||
|ontology_enrichment_celltype=CL:0002327!1.84e-10!4;CL:0000349!5.51e-09!3;CL:0002577!5.51e-09!3;CL:0002328!1.58e-08!3;CL:0002536!8.16e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002536;1.49e-40;2!CL:0000575;4.49e-40;2!CL:0002577;1.70e-27;3!CL:0000349;3.27e-26;19!CL:0000039;2.51e-12;7!CL:0000586;2.51e-12;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,8.98e-41,2;CL:0000575,9.99e-40,2;CL:0002577,1.39e-27,3;CL:0000349,2.58e-26,19;CL:0000039,2.51e-12,7;CL:0000586,2.51e-12,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.37e-18!14;UBERON:0000158!8.37e-18!14;UBERON:0001987!1.93e-11!4;UBERON:0004340!1.93e-11!4;UBERON:0001911!1.84e-10!4;UBERON:0005333!1.84e-10!4;UBERON:0008425!1.84e-10!4;UBERON:0005311!1.84e-10!4;UBERON:0005157!4.58e-10!51;UBERON:0005153!5.38e-10!37;UBERON:0000305!9.50e-10!7;UBERON:0003124!1.08e-09!7;UBERON:0000478!2.13e-09!24;UBERON:0004815!1.58e-08!3;UBERON:0002031!1.58e-08!3;UBERON:0004871!1.83e-08!8;UBERON:0004121!3.57e-08!169;UBERON:0000924!8.37e-08!173;UBERON:0006601!8.37e-08!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;4.47e-26;7!UBERON:0001987;6.65e-21;4!UBERON:0000478;8.27e-21;24!UBERON:0000964;1.28e-20;4!UBERON:0010409;1.28e-20;4!UBERON:0005631;1.73e-18;10!UBERON:0000158;1.73e-18;10!UBERON:0010313;7.66e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.36e-35,14;UBERON:0000158,1.36e-35,14;UBERON:0000305,3.45e-26,7;UBERON:0004871,5.13e-23,8;UBERON:0001987,5.72e-21,4;UBERON:0004340,5.72e-21,4;UBERON:0000478,6.87e-21,24;UBERON:0000964,1.90e-20,4;UBERON:0010409,1.90e-20,4;UBERON:0004348,1.90e-20,4;UBERON:0005427,1.90e-20,4;UBERON:0003124,2.00e-12,7;UBERON:0010313,8.96e-09,10;UBERON:0002342,8.96e-09,10;UBERON:0005062,8.96e-09,10;UBERON:0004923,1.12e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,3.49506195408276,1.84636884759917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,1.09288586487763,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909658919938,0.871901815541886,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,4.99306318531491,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,1.48482340416319,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0.945550727071745,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0.278847488557207,0,0,1.1528195219403,0.987334088507493,2.49888955420619,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.391969589657511,0,0.17472666824203,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0.782205530939212,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0.704815022316672,0.427149650270779,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.392590874004102,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,0,0.131545547125698,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0.285906176706625,0,0,0,0,0.207216164163037,0.3414369541879,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754814217833368,0,0,2.35158648180761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.305966489225945,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0.509177266225319,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@GRAMD2 | |||
}} |
Revision as of 00:24, 12 January 2014
Short description: | p3@GRAMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRAMD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BC038451_5end |
EntrezGene: | GRAMD2 |
HGNC: | 27287 |
UniProt: | Q8IUY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 8.98e-41 | 2 |
corneal epithelial cell | 9.99e-40 | 2 |
placental epithelial cell | 1.39e-27 | 3 |
extraembryonic cell | 2.58e-26 | 19 |
germ line cell | 2.51e-12 | 7 |
germ cell | 2.51e-12 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.36e-35 | 14 |
membranous layer | 1.36e-35 | 14 |
amnion | 3.45e-26 | 7 |
somatic layer of lateral plate mesoderm | 5.13e-23 | 8 |
placenta | 5.72e-21 | 4 |
allantois | 5.72e-21 | 4 |
extraembryonic structure | 6.87e-21 | 24 |
cornea | 1.90e-20 | 4 |
eye surface | 1.90e-20 | 4 |
optic eminence | 1.90e-20 | 4 |
corneal primordium | 1.90e-20 | 4 |
chorion | 2.00e-12 | 7 |
neural crest-derived structure | 8.96e-09 | 10 |
neural crest | 8.96e-09 | 10 |
neural fold | 8.96e-09 | 10 |
organ component layer | 1.12e-07 | 66 |