FFCP PHASE1:Hg19::chr16:16043406..16043423,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4363 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=51 | |||
|TSSclassifier=strong | |||
|UniProt=P33527 | |||
|association_with_transcript=-10bp_to_ENST00000345148,ENST00000346370,ENST00000349029,ENST00000351154,ENST00000399408,ENST00000399410,NM_004996,NM_019862,NM_019898,NM_019899,NM_019900,uc010bvi.2,uc010bvj.2,uc010bvk.2,uc010bvl.2,uc010bvm.2_5end | |||
|description=CAGE_peak_2_at_ABCC1_5end | |||
|id=chr16:16043406..16043423,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.14e-17!679;CL:0000004!1.14e-17!679;CL:0000255!1.14e-17!679;CL:0000012!1.22e-17!682;CL:0000144!1.63e-16!625;CL:0002371!3.71e-14!591;CL:0002321!1.28e-13!248;CL:0000220!4.01e-13!246;CL:0000003!1.17e-12!722;CL:0000222!1.48e-10!119;CL:0000055!4.26e-07!180;CL:0002078!4.63e-07!44;CL:0000213!8.74e-07!57;CL:0000215!8.74e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.33e-14,250;CL:0000222,4.74e-11,121;CL:0002078,2.44e-07,45;CL:0000213,3.32e-07,58;CL:0000215,3.32e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.58e-07!69;UBERON:0002049!1.73e-07!79;UBERON:0007798!1.73e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.14e-07,68;UBERON:0002049,1.78e-07,78;UBERON:0007798,1.78e-07,78;UBERON:0007500,7.75e-07,59;UBERON:0001981,7.75e-07,59;UBERON:0004537,7.75e-07,59;UBERON:0006965,7.75e-07,59 | |||
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| |||
|short_description=p2@ABCC1 | |||
}} |
Revision as of 02:34, 12 January 2014
Short description: | p2@ABCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABCC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000345148, ENST00000346370, ENST00000349029, ENST00000351154, ENST00000399408, ENST00000399410, NM_004996, NM_019862, NM_019898, NM_019899, NM_019900, uc010bvi.2, uc010bvj.2, uc010bvk.2, uc010bvl.2, uc010bvm.2_5end |
EntrezGene: | ABCC1 |
HGNC: | 51 |
UniProt: | P33527 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.33e-14 | 250 |
mesodermal cell | 4.74e-11 | 121 |
meso-epithelial cell | 2.44e-07 | 45 |
lining cell | 3.32e-07 | 58 |
barrier cell | 3.32e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.14e-07 | 68 |
vasculature | 1.78e-07 | 78 |
vascular system | 1.78e-07 | 78 |
epithelial tube open at both ends | 7.75e-07 | 59 |
blood vessel | 7.75e-07 | 59 |
blood vasculature | 7.75e-07 | 59 |
vascular cord | 7.75e-07 | 59 |