FFCP PHASE1:Hg19::chr16:23690138..23690158,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5347 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9077 | |||
|TSSclassifier=strong | |||
|UniProt=P53350 | |||
|association_with_transcript=0bp_to_ENST00000300093_5end | |||
|coexpression_cluster_id=C747 | |||
|description=CAGE_peak_3_at_PLK1_5end | |||
|id=chr16:23690138..23690158,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.32e-25!679;CL:0000004!3.32e-25!679;CL:0000255!3.32e-25!679;CL:0000012!6.68e-25!682;CL:0000066!1.39e-21!254;CL:0000003!2.21e-15!722;CL:0002321!1.50e-14!248;CL:0000220!8.07e-14!246;CL:0000144!8.58e-12!625;CL:0000063!1.55e-11!578;CL:0000222!3.35e-08!119;CL:0000213!4.48e-08!57;CL:0000215!4.48e-08!57;CL:0000055!7.60e-08!180;CL:0000076!1.29e-07!62;CL:0002371!3.81e-07!591;CL:0002078!4.32e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.69e-08;15!CL:1000497;5.18e-08;17!CL:0002518;5.18e-08;17!CL:0002681;3.53e-07;12!CL:0002584;3.53e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.94e-15,253;CL:0002321,2.34e-09,250;CL:0000213,1.12e-08,58;CL:0000215,1.12e-08,58;CL:1000449,2.77e-08,15;CL:1000497,7.24e-08,17;CL:0002518,7.24e-08,17;CL:0002078,1.79e-07,45;CL:0000222,1.87e-07,121;CL:0002681,4.84e-07,12;CL:0002584,4.84e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.19e-30!235;DOID:14566!8.22e-30!239;DOID:2531!1.03e-15!51;DOID:0060083!1.03e-15!51;DOID:0050686!1.31e-14!137;DOID:0050687!9.98e-14!143;DOID:305!1.67e-12!106;DOID:1240!2.04e-12!39;DOID:8692!1.42e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.50e-10;39!DOID:2531;1.03e-09;51!DOID:0060083;1.03e-09;51!DOID:8692;4.21e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.98e-22,235;DOID:14566,2.25e-21,239;DOID:2531,5.27e-16,51;DOID:0060083,5.27e-16,51;DOID:1240,1.17e-12,39;DOID:0050686,1.26e-10,137;DOID:8692,2.06e-09,31;DOID:0050687,1.15e-08,143;DOID:305,1.21e-08,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.69e-08;15!UBERON:0004819;1.69e-08;15!UBERON:0001285;1.69e-08;15!UBERON:0007684;1.69e-08;15!UBERON:0001851;5.75e-08;15!UBERON:0001225;3.53e-07;12!UBERON:0008987;3.53e-07;12!UBERON:0001737;3.72e-07;9!UBERON:0001557;3.72e-07;9!UBERON:0000353;6.18e-07;15!UBERON:0002113;7.59e-07;24!UBERON:0011143;7.59e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,2.77e-08,15;UBERON:0009773,2.77e-08,15;UBERON:0001231,2.77e-08,15;UBERON:0001285,2.77e-08,15;UBERON:0007684,2.77e-08,15;UBERON:0004208,2.77e-08,15;UBERON:0001851,5.63e-08,15;UBERON:0006555,2.15e-07,16;UBERON:0004819,2.15e-07,16;UBERON:0001737,4.67e-07,9;UBERON:0001225,4.84e-07,12;UBERON:0008987,4.84e-07,12;UBERON:0000353,8.29e-07,15 | |||
|phase1_expression=0,0.856402095563933,0,0,0,0,0,0.631719873426831,0,4.17747692052565,11.1648186875588,1.96597234917155,1.31883489114227,0.247532705920093,0.331397375727916,0,0,0,0,5.78668972960903,4.28401451612931,2.82109249330279,1.43117993565528,4.51685602740518,4.14290710662849,3.20936304141395,3.7766271146975,4.48651453487972,0,0.383829398097213,0,8.27479102031034,3.614471025339,1.10926203050036,4.880433636559,3.2698923472107,0.587200878669695,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10707267820062,0,0,0,0,0,0,0,0.891283655081389,0.294605907474837,0,0,0.768547918354051,0.390178042679635,0.328875809207352,0.829050053357545,0.289803085735052,0,0,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.895037932904712,1.0843174571537,1.00267582127178,0.144846518960824,1.5905718941022,0,1.70162670895322,0.665188192387692,1.22968699970376,1.96468613246569,2.91436230634034,2.22470665670658,0,0,0,0,0,0,5.56534740626774,1.72046919021225,3.81854551768354,2.26123176769604,2.09749718104953,3.02629846134074,3.76190939766259,0,0.71153252537342,0,2.81980521976403,0.760272105718513,1.70843440283719,2.20597848207521,0.81014194788176,1.96459402224975,2.69435247151404,3.94140181691628,4.5994991239765,6.6448596169769,4.21364011039937,0,0,2.61656431285521,0,1.39293562831038,0,3.72887606973458,3.19201543978521,1.68203280042692,6.4049397437823,0.74000264525148,0.933633106199299,0.808264032418128,2.28846664358842,1.36221684880438,0,6.7953215231801,0.312160076830321,2.85235910772225,0.298897361103602,3.52303495931295,3.0755859429945,3.23036855415172,0.408308342509787,2.57952066354713,0.516628905878827,2.37600571456411,0.247266929278557,6.37112953356618,0,2.86171393721913,4.37914819551875,2.21651292387346,2.19488810440419,0.612975591598039,0.45071417671979,2.7223723958405,2.87023417102179,0.213557388818567,0.211931901159562,2.40072876867522,1.13357782162283,0.772921620136887,0.744467425326359,2.70042131586026,2.14361411354637,2.01947019395292,0.0920498986422993,0,0.710019185033229,1.71278566986988,3.56077243852024,0.773043412653187,1.63647672354501,0.573609190778008,6.09868530647977,4.90360142789496,4.18298194330266,3.31715376049185,6.30802127189071,4.01475094983413,1.56449532329816,0.643240938192885,5.52539685409922,0,0,4.8505788016336,5.39471008249925,4.82022059766964,5.29411069115491,5.44698610231015,6.40630671599961,4.31460186112526,4.12065076763227,3.07797725557112,1.4763109092493,7.01208869017229,2.4694440679884,4.41026134156626,0,0,0,3.97316789473185,1.59884970106048,1.71567810298526,0.548751427043128,0,1.50793458617446,1.38882667737794,3.9096996637239,2.07986957055916,2.88662684050547,0.927443239800615,0.117408694235822,0.866198686566443,1.38895653772983,0.951270761172991,3.1608175918371,4.29243081047436,0,0.936017060556951,0.445893486866185,0.93733833986777,0,0.850650583454319,2.23896306757121,4.06887513919547,3.4504441124869,0,0.264145302039678,0,0,0.12624243342638,1.20645999155121,0.381988425558278,5.86087236050235,0,0.411309970813294,1.20137223137567,0.571652865261156,5.60655421726804,2.1798003441664,3.88692914851035,0,0,1.690605505112,0,2.08014873822732,7.45901385360212,2.83698264046557,5.59486575933809,0.142977993658148,0,2.46972101034231,3.90883421152482,0,4.75171123760058,0,0,0.599837947092342,0,0,0,1.4377491329495,0,1.42636905040718,1.01346914667305,0.410952645100767,1.07436577943937,2.91421374383171,0,0,0,0.508189248444927,3.90419561572865,0,0.837581326671744,0.637938751653163,0,0,0,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0.315404830067869,0.35142424497814,0,0,1.03473071292505,1.99267679560631,1.65932251687533,1.12948698808508,0.783204629850962,0,0,0,0,1.21251028578504,3.32870879020994,3.0239029332968,0,0.460385919864187,0,0.128139149255701,0.511707249066704,0,0,2.62156479464514,1.42049380250502,2.62806899244189,2.59627214591811,2.5566283261191,2.77976734060731,0.40101294060657,0,5.39627906373652,3.45973219212762,0,4.51199612907412,1.30926073077505,7.84349769176855,5.84556898613043,1.16106791782163,12.5106722477986,3.91215522135986,3.67057057373637,4.62681758070868,2.16757150035082,2.00675909541941,4.33289664176565,4.15538004464362,4.92524460388792,1.97333888981341,2.0914836081992,3.84675187674584,2.29610251989794,0.325378394664303,0,2.38080608527693,3.13536099698234,0,0.650060246036521,1.6068392984416,0.290012154876366,3.69716681075147,2.6095624703442,2.34322173223702,0.859361958946189,1.16013355131383,1.96021243057032,0.890320356467374,0.165284915360978,0.192190067365106,0.382838137483752,0.10115778085555,0,0,2.7881490806424,3.08033580176089,1.59691809095107,0.869932992075073,0.18532421910392,1.43124886741991,1.86079184679834,1.58189712359363,0,3.58256907835867,0,1.59101623962968,2.35484592059769,1.2591072030832,1.09814811894422,0.942499218765491,2.62837226045311,0,2.10629228119491,8.77740730361263,0,1.05650146756755,2.047498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| |||
|short_description=p3@PLK1 | |||
}} |
Revision as of 02:47, 12 January 2014
Short description: | p3@PLK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLK1_5end |
Coexpression cluster: | C747_Mesenchymal_alveolar_Trabecular_Alveolar_carcinoid_Renal_chronic |
Association with transcript: | 0bp_to_ENST00000300093_5end |
EntrezGene: | PLK1 |
HGNC: | 9077 |
UniProt: | P53350 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.94e-15 | 253 |
embryonic cell | 2.34e-09 | 250 |
lining cell | 1.12e-08 | 58 |
barrier cell | 1.12e-08 | 58 |
epithelial cell of nephron | 2.77e-08 | 15 |
kidney cell | 7.24e-08 | 17 |
kidney epithelial cell | 7.24e-08 | 17 |
meso-epithelial cell | 1.79e-07 | 45 |
mesodermal cell | 1.87e-07 | 121 |
kidney cortical cell | 4.84e-07 | 12 |
renal cortical epithelial cell | 4.84e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 2.77e-08 | 15 |
renal tubule | 2.77e-08 | 15 |
nephron tubule | 2.77e-08 | 15 |
nephron | 2.77e-08 | 15 |
uriniferous tubule | 2.77e-08 | 15 |
nephrogenic mesenchyme | 2.77e-08 | 15 |
cortex | 5.63e-08 | 15 |
excretory tube | 2.15e-07 | 16 |
kidney epithelium | 2.15e-07 | 16 |
larynx | 4.67e-07 | 9 |
cortex of kidney | 4.84e-07 | 12 |
renal parenchyma | 4.84e-07 | 12 |
parenchyma | 8.29e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.98e-22 | 235 |
disease of cellular proliferation | 2.25e-21 | 239 |
hematologic cancer | 5.27e-16 | 51 |
immune system cancer | 5.27e-16 | 51 |
leukemia | 1.17e-12 | 39 |
organ system cancer | 1.26e-10 | 137 |
myeloid leukemia | 2.06e-09 | 31 |
cell type cancer | 1.15e-08 | 143 |
carcinoma | 1.21e-08 | 106 |