FFCP PHASE1:Hg19::chr16:30080136..30080158,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=226 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=414 | |||
|TSSclassifier=strong | |||
|UniProt=P04075 | |||
|association_with_transcript=-15bp_to_M21190_5end | |||
|coexpression_cluster_id=C1219 | |||
|description=CAGE_peak_15_at_ALDOA_5end | |||
|id=chr16:30080136..30080158,+ | |||
|ontology_enrichment_celltype=CL:0000192!4.45e-09!42;CL:0000514!4.45e-09!42;CL:0000359!8.71e-09!32;CL:0000680!3.04e-08!57;CL:0000056!3.04e-08!57;CL:0000355!3.04e-08!57;CL:0000183!4.98e-08!59;CL:0002371!8.90e-08!591;CL:0000187!1.24e-07!54;CL:0000393!2.41e-07!60;CL:0000211!2.41e-07!60;CL:0000055!5.78e-07!180;CL:0000144!9.94e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.19e-09;32!CL:0000473;2.05e-07;39!CL:0000234;2.05e-07;39!CL:0000860;4.22e-07;33!CL:0002057;4.22e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.94e-09,32;CL:0000192,1.31e-08,43;CL:0000514,1.31e-08,43;CL:0000680,6.62e-08,58;CL:0000056,6.62e-08,58;CL:0000355,6.62e-08,58;CL:0000473,2.41e-07,48;CL:0000234,2.41e-07,48;CL:0000187,3.13e-07,55;CL:0000393,3.53e-07,61;CL:0000211,3.53e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!8.62e-11!42;UBERON:0003509!8.62e-11!42;UBERON:0004572!8.62e-11!42;UBERON:0004290!9.64e-11!70;UBERON:0000914!2.48e-10!83;UBERON:0002329!2.48e-10!83;UBERON:0003077!2.48e-10!83;UBERON:0003059!2.48e-10!83;UBERON:0007282!2.48e-10!83;UBERON:0009618!2.48e-10!83;UBERON:0007285!2.48e-10!83;UBERON:0001134!4.73e-10!61;UBERON:0002036!4.73e-10!61;UBERON:0003082!4.73e-10!61;UBERON:0002385!1.62e-09!63;UBERON:0001015!1.62e-09!63;UBERON:0000383!1.62e-09!63;UBERON:0002204!6.00e-09!167;UBERON:0000486!1.15e-08!82;UBERON:0001981!6.60e-08!60;UBERON:0007500!6.60e-08!60;UBERON:0004537!6.60e-08!60;UBERON:0006965!6.60e-08!60;UBERON:0004573!8.87e-08!33;UBERON:0004571!8.87e-08!33;UBERON:0000055!1.52e-07!69;UBERON:0004872!1.55e-07!84;UBERON:0002049!6.50e-07!79;UBERON:0007798!6.50e-07!79;UBERON:0000926!9.34e-07!448;UBERON:0004120!9.34e-07!448;UBERON:0006603!9.34e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.10e-08;42!UBERON:0003509;8.10e-08;42!UBERON:0004572;8.10e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.75e-11,78;UBERON:0007524,4.41e-11,73;UBERON:0001637,5.34e-11,42;UBERON:0003509,5.34e-11,42;UBERON:0004572,5.34e-11,42;UBERON:0003077,1.06e-10,72;UBERON:0007285,1.06e-10,72;UBERON:0002329,1.30e-10,71;UBERON:0003059,1.30e-10,71;UBERON:0007282,1.30e-10,71;UBERON:0004290,1.30e-10,71;UBERON:0009618,1.30e-10,71;UBERON:0000926,1.58e-10,315;UBERON:0004120,1.58e-10,315;UBERON:0006603,1.58e-10,315;UBERON:0001134,7.35e-10,62;UBERON:0002036,7.35e-10,62;UBERON:0003082,7.35e-10,62;UBERON:0002385,1.91e-09,64;UBERON:0001015,1.91e-09,64;UBERON:0000383,1.91e-09,64;UBERON:0002204,3.02e-09,167;UBERON:0000486,2.61e-08,83;UBERON:0007500,5.16e-08,59;UBERON:0001981,5.16e-08,59;UBERON:0004537,5.16e-08,59;UBERON:0006965,5.16e-08,59;UBERON:0004872,8.25e-08,83;UBERON:0004573,1.32e-07,33;UBERON:0004571,1.32e-07,33;UBERON:0003081,3.11e-07,203;UBERON:0000055,4.67e-07,68;UBERON:0005256,7.94e-07,122 | |||
|phase1_expression=1.63510541343501,8.99222200342129,1.69145284915165,6.00439790118782,4.91657203870017,6.97870819280295,7.59899634504932,0,2.35067065379855,2.21160542851358,11.8626198555313,1.09220686065086,1.05506791291381,0.866364470720326,1.98838425436749,4.70627602516243,3.61616716814386,5.11217063271161,4.39139518911456,0.369363174230364,1.63200552995402,0.940364164434263,0,2.32686522623903,0.627713197974014,0.916960868975415,0.738905305049512,0.787107813136792,0.786728553697808,0,0.928896739896456,7.35536979583142,7.53014796945625,7.02532619316897,0.0774672005803016,0.284338464974843,0.293600439334847,0,0.401088894940283,0.434021741431704,0.223915474239924,0.32389366601898,0.257575567634187,3.63495596948912,2.64513160582167,2.18325655069035,3.25400651667958,1.6446715520873,1.54853185447552,3.74000110018796,4.09857130446561,2.83778675866302,2.75796544589295,1.93645405075148,1.35426486594342,3.76484679085209,3.0019676506363,1.34834090667051,5.20342617030534,0.641858054152187,1.91801137739712,4.61791820261403,2.79249120670285,1.27867425159808,3.77272010217159,1.13477044938228,1.24564449799115,3.76872997885115,1.5644487552606,1.52032191293582,3.02699751316684,0.736555271975129,2.21523671208619,1.69004229049553,1.91343869968539,1.67726916406701,1.34794357375794,1.50176892841506,0.64290234678832,0.570025487482497,1.39241674039363,0.730656615058536,0,1.09227722252426,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0.786021525498329,0.822405995998037,1.00311897234407,0,0.946895611469467,0,0.779873198196215,0.589211814949674,1.10766947291811,0.812411591295047,1.28091319725675,0.910415432919148,0.822189523018381,1.10540007114339,0.869409257205157,0.14828656316206,0,0,0.793165398882963,1.53288197440768,0,0,0.637130828648193,0.651083453856419,0,0.451725357233318,0.255973222308837,0,0,0,0.201606743224732,0.802320587350522,0.579297615531196,0,1.34140171940727,0.639312809217652,0.361439152384566,2.50668955317945,2.31754430337318,0,1.45990461090791,1.13441780596881,1.55210578223795,1.22968699970376,0.458426764241994,1.45718115317017,3.70784442784429,0.649094787309367,0.696518949197069,2.79211717089617,0.476981248610684,0.571994910780128,0,0.79504962946682,0.860234595106124,0,1.13061588384802,1.67799774483962,6.05259692268148,2.29894463190492,1.03366703667732,0.35576626268671,1.33888245105868,1.20848795132744,0,2.19655851793353,0.367663080345869,6.48113558305408,0.982297011124877,0.44905874525234,0.675668882899933,0,1.89853131913626,2.74802615895611,0,0,1.74437620857014,3.47880366186723,1.77282716330412,1.58891016975863,2.0078563452417,2.83734705758686,5.60677600142307,6.4049397437823,5.92002116201184,0,2.2900814251847,1.79808093424805,0.454072282934794,1.15235184896,0.234321431833797,2.18512053781224,0,2.39117888882882,1.76151747965647,0.971237666208789,1.82586048712923,1.42907919878425,1.10550885580591,0.929932030581889,1.18800285728205,3.21447008062124,0.910161361938026,3.59309070908119,0.505008341862199,1.25118519871964,0.277064115484183,0,5.82326812018137,0.901428353439581,1.58805056424029,1.4351170855109,1.06778694409284,1.69545520927649,1.80054657650641,0.92747276314595,1.8034837803194,2.23340227597908,0.168776332241266,1.85130309806277,1.00973509697646,0.460249493211497,0.646584227275248,0.355009592516614,1.5112814734146,0.339121184620975,0.773043412653187,0.272746120590835,0.860413786167011,1.70763188581434,0.662648841607426,1.97529702878181,1.7622379352613,2.52320850875628,1.82488679537915,1.56449532329816,4.5026865673502,1.38134921352481,1.85747171212792,2.88751792667834,2.72105640091641,2.86593973132773,3.37415441836875,3.74999507290139,1.96091499683166,2.37270619111097,3.50561401216427,3.33576490713088,3.8474715694639,2.21446636387394,1.40241773803446,0,1.47008711385542,0,0,0,1.7658523976586,0.245976877086227,1.02940686179115,1.86575485194663,1.1240175325762,1.80952150340936,0.833296006426766,0,4.15973914111831,1.44331342025273,0.579652024875384,0.234817388471643,1.01056513432752,0.925971025153221,0.570762456703795,4.74122638775565,4.29243081047436,1.72351904261178,1.17002132569619,2.97262324577457,3.74935335947108,0.335964256397719,1.55952606966625,0.447792613514241,0.581267877027924,3.4504441124869,0,0.528290604079356,0.621984346622316,0.576479813667846,0.37872730027914,0.380987365753014,1.52795370223311,3.51652341630141,1.71072446022705,1.85089486865982,0.901029173531752,1.42913216315289,0.112131084345361,0.87192013766656,0.36669142910475,1.16344544182,3.57656445851882,0.845302752556,0.26593811658487,0,1.28603687131071,2.83698264046557,2.66422179016099,1.14382394926518,0.542621605391443,1.64648067356154,1.62868092146868,1.77695974371273,1.58390374586686,0.904318131178758,0,1.59956785891291,3.64871341923571,1.00451418286425,4.21667878966063,1.19812427745791,0,0,2.02693829334611,3.28762116080613,1.43248770591916,0.448340575974109,0,0.862510299438069,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,2.24702107184155,0,0,0.49076596687656,2.50085260529839,2.98391526069709,4.36738809214695,7.31558854068363,1.89242898040722,2.34282829985426,2.10662269809403,4.5481500811197,2.0694614258501,0,3.13427586520895,0.781952530212746,1.17480694477644,2.74514739048685,0,1.2942852049117,0.426910231213777,1.81876542867756,1.66435439510497,2.72151263996712,0.744323423456331,0.153461973288062,3.08726103876381,1.92208723883551,0,2.2519548960105,4.45254199334973,1.85051632563187,2.30830242907065,0.410635780069046,2.59627214591811,1.97557643381931,0.966875596732978,9.62431057455767,0.552485933615378,2.41110341145674,3.09554985611419,3.8026080338233,0.451199612907412,1.77135275340154,1.56869953835371,0,0.949964660035881,2.27466768141793,1.87103075804167,0.431831832204279,3.08454505380579,0.812839312631559,1.50506932156456,0,4.15538004464362,1.56712328305525,0,0.522870902049801,1.79515087581472,0,0,0.206082023295445,1.19040304263846,0.165018999841176,0,3.90036147621913,0,0.676695028044854,2.61882649094895,1.99554777143968,1.51620229732984,0.644521469209642,2.75531718437034,1.70453254832202,0.445160178233687,2.31398881505369,2.30628080838127,0.255225424989168,1.31505115112215,3.253918845081,0.62962469366128,0.6970372701606,2.7723022215848,3.19383618190213,1.73986598415015,2.22389062924704,3.00562262158182,1.116475108079,0.632758849437452,1.14378116354295,0.511795582622668,0.42793898803392,3.5002357271853,14.9140241637854,1.61885211824983,1.37268514868027,0.942499218765491,1.2130948894399,6.34041284692033,4.63384301862879,1.46290121726877,1.94970791705028,7.39551027297288,1.36499911407986,3.39373036688911,2.26016233240486,6.06501877900737,5.97095077717098,10.0843703608365,2.31510213706675,0.655894752046633,2.43492452355245,6.8161169581945,6.47899885824155,0,0.589494246078727,3.5667105148125,3.19284957663538,3.16661452946496,1.97576935775941,0.75894634753143,1.04980416073495,0.962221127255121,6.03272047982209,14.1558280319719,0.0941438007767792,0.86101074534246,0,4.87773168890343,0.459446800413919,1.01489521846434,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,2.37937552888281,0.427296284509893,0.962479855263359,2.20536194382929,0.371606350251437,0.144269212976445,0.0711418433484141,0.478278818186467,2.99369057149225,0.766021480529467,0.635020748171649,2.27235358192189,1.12318871245384,0.684704037099577,2.50687833236837,0,1.18504244461122,1.1241165257259,1.21079824314629,0,1.03051603426729,0.921722292925374,0.223676107892416,0.667396566847634,0.781552381608161,0.556812347790485,0,1.35227839237992,0,0,0.37428108081644,0.73254089635947,0.606802608747567,0.66866030566487,0.568272293612826,0.23874448473769,0.593929361665277,1.53580351049616,2.98244294329889,0.422008249231538,0.445234820091624,1.48323486804084,0,0.996239941255349,0.276283915531148,0.251932747854276,0.306806047506464,0.246169610922139,2.17727711363265,0.0898683511473268,0.179021174675609,2.04628948090749,0.887790650732402,0,0,3.87733098438087,1.85536196323703,0,1.5625665665114,0.524759999977174,0,1.70690172428249,0.762760950878299,1.65471377237555,1.03423011972439,1.45802306691627,0.347249989866585,0,0.482385754501632,1.52581736317083,0.331737779793674,1.47773809476774,1.75508317723178,0.32681539055697,0.139423744278603,0.538651809526579,0.455768223388005,0.46112780877612,0.448788222048861,0.54323685961004,0.957003479195758,1.19076871422421,4.26427820814908,4.08773192782946,0.627921025580099,0.166211681900156,0.902382642468723,1.76456280885966,1.84603745673427,0.189753732724185,0.158936578980379,3.16497096792041,0.816164040795739,0,0,0,0.176915129006678,1.22206028986725,0.296521128680622,0.247127877893006,0.417687798021821,0.067401132980677,12.0386647094818,0.937057782901357,2.18945747058799,0.782658475728359,0.728341138602278,0.789168805698781,1.20990716048664,0,0.126373159256976,1.05226393590145,0.622129148383483,0,0.661983911750998,0.313932918407225,0,0.569219092059585,0,2.2562765983567,0.293977192243133,0.261177619741208,2.09672001890436,1.0319161948297,1.16107597546902,0.877071805034227,1.39596276990456,1.06687918137261,0.176512253383001,1.12990370390266,1.09633539717401,0.794858446811959,0.569797163602908,0,0.160317640503067,1.06726497369676,2.39771531498556,0.288180834308212,0.229073192331831,0.857974989309823,0,0.248505071130865,0.942776138467182,0.271808412147228,0.313808538937,0.305994652908965,0.288950589901519,0.600420288709789,0.547621515567972,0,1.28929632425987,0,1.39641200636127,0.458320848023367,0.717873024576814,3.59422200898184,3.86303443322914,1.56220020209311,0.604651252380536,0.720599767084807,0,1.89079637537337,2.14281231791033,1.28066733322951,0.590564889088493,0.423366660328922,1.59045937961861,0.817220436669454,1.92903778158023,3.30094647833361,7.89336642255452,0.449947783103001,0,0.303747783290123,1.67717343799633,0.630445658393585,0.367182116944987,0.211200673038813,4.12360880465543,0.383830394638891,5.71756261098694,1.32418394073086,0,9.23099322981312,8.64221491201268,4.89881040164114,1.19730191562487,0.246277562248017,1.19271615249795,0.339936274560377,0.293104467356165,1.32506888912221,0.517131825446202,0.92562821219883,0.513260513652988,0,0.320362237703084,0.157204305099666,0,1.48849806543585,1.58089305518355,0.487170393523584,0,1.08803560673895,1.0027595760908,0.612691153526923,0.327872630709804,0.314108192500469,0,2.80660409274515,0.500763722825999,0,0.776503360757966,0.310482014706917,1.24513771442608,0.37494122388632,0.758245587708239,0.856396000634902,5.41111385305795,1.40500471742064,0.724605143054126,2.98509605773748,1.16856654923612,2.77402930751307,1.7046270474758,3.0188148210309,0,1.37304041038154,2.11723293268535,1.24349760466224,0.887130899937803,0.955780602982214,1.34940933649081,1.55262956876259,1.24411862352257,2.65841714557995,2.60872530905867,2.25386413495828,7.9969094555447,1.22061219961398,1.45478927362048,1.8259794697223,3.71227007902795,5.97143833047924,6.40044423461046,2.74716564146234,1.34699795506368,0,0,0.643324774124777,2.3489486276869,2.94717703165954,0.926089897295336,0.489473409012935,0.179088841081487,1.23520578864389,2.19284049578707,1.59020231351293,1.3503982678964,1.35153952522458,3.8436227788192,2.07258205038719,1.21543982470953,0.414775308455192,0.779441235357554,0.398594520940089,0.654261577023377,1.96565909307848,5.89854981008926,0.633936370075881,0.79994958341972,0.853533837553127,0,0,0.736423801007363,1.11903606175556,0.622077260032973,0,0.107824811396682,0.314531883711793,0.109209638192014,0.33946505990805,1.06287460050841,1.11542187833102,0,1.27201740261367,0.23658523500376,0.80057074828547,3.17408349321616,3.6749457282384,0.128458450192919,1.41696576325585,0.638535436228605,1.43581454968528,0,0.553258019713743,1.45328081068666,0,0.196295437002051,0.235939446695481,1.65085738669511,0.346576998451015,1.1441462864015,0,0.397832444232549,0.451261970095544,1.21023041222112,0.781514011233092,1.30953347240711,1.96526301012116,0.295712172434091,0.135075169236789,2.34323429584154,1.2401207790071,0.317079050969534,0,1.64477330057155,9.42801238939659,0.527613733078862,0.894336993477167,0.535701835878287,0,0,0.455324382702595,0.354809480650555,1.49804183822513,1.37190407549935,0.475788130837822,0.920818829879887,0.709163045303809,0,0.313972371402056,0.628462359664008,0.280272163313789,0,0.431855182437243,0.9555033757741,0.643288897589907,0.158013611732727,0.23248285073625,0,0.801711364730253,1.24329698497822,1.0243108625637,0,0,0.118332000730565,0.511280428554946,2.11693525095465,0.68732060563215,7.755159641608,1.91107787795487,0.111855431797792,0.490751168076215,0.243835849964539,4.53200186031526,5.74911718394983,19.7168453327494,1.94284397223656,0.233939463462106,0.198950775161368,0.713520544665411,0,0.659643100472575,0.452888530700021,0.154348316215889,0.874238242015829,3.29222107453066,1.22574160876953,0,0.588925401344836,0.594092800654172,2.113278637917,0.849635573439084,0.281951753939561,0.0644578879735772,0.799529247399431,0.178553938605658,0.352894871715692,0.240724100067505,0,1.37618785021362,0.573358332605805,0,0.271965960763659,0.872701380680755,4.2322147241232,0.743990036333503,1.84870251452567,0.865253124247578,1.13549782351571,0,0.253397002022874,0.713921808193872,0.26721740526556,0.459474497674225,4.26202816797038,0.454672189309436,1.07185652062471,0,0.724030971033267,8.52935927603924,2.3806443146374,0.452122368852043,0,0.897054900644907,0.25458863311266,1.21270313374932,11.538987638539,9.24029912930259,0.26940821205835,0.717222053926764,1.66330178273007,0.244209805832924,0.426909383510862,0,0.898252021065869,0,0,0.813792356631477,0.665756774185513,1.61019034872821,1.60284246151616 | |||
|short_description=p15@ALDOA | |||
}} |
Revision as of 03:08, 12 January 2014
Short description: | p15@ALDOA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_ALDOA_5end |
Coexpression cluster: | C1219_Smooth_Tracheal_penis_tongue_skeletal_leiomyoma_diaphragm |
Association with transcript: | -15bp_to_M21190_5end |
EntrezGene: | ALDOA |
HGNC: | 414 |
UniProt: | P04075 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.94e-09 | 32 |
smooth muscle cell | 1.31e-08 | 43 |
smooth muscle myoblast | 1.31e-08 | 43 |
muscle precursor cell | 6.62e-08 | 58 |
myoblast | 6.62e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.62e-08 | 58 |
defensive cell | 2.41e-07 | 48 |
phagocyte | 2.41e-07 | 48 |
muscle cell | 3.13e-07 | 55 |
electrically responsive cell | 3.53e-07 | 61 |
electrically active cell | 3.53e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.75e-11 | 78 |
dense mesenchyme tissue | 4.41e-11 | 73 |
artery | 5.34e-11 | 42 |
arterial blood vessel | 5.34e-11 | 42 |
arterial system | 5.34e-11 | 42 |
paraxial mesoderm | 1.06e-10 | 72 |
presumptive paraxial mesoderm | 1.06e-10 | 72 |
somite | 1.30e-10 | 71 |
presomitic mesoderm | 1.30e-10 | 71 |
presumptive segmental plate | 1.30e-10 | 71 |
dermomyotome | 1.30e-10 | 71 |
trunk paraxial mesoderm | 1.30e-10 | 71 |
mesoderm | 1.58e-10 | 315 |
mesoderm-derived structure | 1.58e-10 | 315 |
presumptive mesoderm | 1.58e-10 | 315 |
skeletal muscle tissue | 7.35e-10 | 62 |
striated muscle tissue | 7.35e-10 | 62 |
myotome | 7.35e-10 | 62 |
muscle tissue | 1.91e-09 | 64 |
musculature | 1.91e-09 | 64 |
musculature of body | 1.91e-09 | 64 |
musculoskeletal system | 3.02e-09 | 167 |
multilaminar epithelium | 2.61e-08 | 83 |
epithelial tube open at both ends | 5.16e-08 | 59 |
blood vessel | 5.16e-08 | 59 |
blood vasculature | 5.16e-08 | 59 |
vascular cord | 5.16e-08 | 59 |
splanchnic layer of lateral plate mesoderm | 8.25e-08 | 83 |
systemic artery | 1.32e-07 | 33 |
systemic arterial system | 1.32e-07 | 33 |
lateral plate mesoderm | 3.11e-07 | 203 |
vessel | 4.67e-07 | 68 |
trunk mesenchyme | 7.94e-07 | 122 |