FFCP PHASE1:Hg19::chr16:54320617..54320643,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79191 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14360 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000558180_5end | |||
|coexpression_cluster_id=C3570 | |||
|description=CAGE_peak_3_at_IRX3_5end | |||
|id=chr16:54320617..54320643,- | |||
|ontology_enrichment_celltype=CL:0000055!5.31e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.08e-07!365;UBERON:0003102!7.74e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,7.99e-08,15;UBERON:0003057,7.99e-08,15 | |||
|phase1_expression=1.81678379270557,1.49870366723688,0.422863212287913,2.00146596706261,0.446961094427288,0,0,1.89515962028049,0.261185628199839,0,0.697801167972428,0,0.263766978228454,0.123766352960047,1.98838425436749,2.6893005858071,0,1.46062018077475,0.975865597581014,6.03293184576261,11.2200380184339,10.9709152517331,1.43117993565528,1.23186982565596,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.130059347559878,1.80881695064044,1.10540007114339,0.579606171470105,0,0,0,0.566546713487831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,8.67453965722959,4.01070328508712,4.05570253090306,1.5905718941022,1.94653948121054,0,0,0,4.32230949142452,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.506522046658319,0.264818361626438,0.286836620748814,1.41867352879343,1.12135520028461,0,0.24666754841716,0.622422070799533,0.269421344139376,0.490385709340376,0.605429710579726,1.15235184896,0.937285727335186,0,0.570471821544449,0.298897361103602,0.704606991862589,0.809364721840658,1.54495887372473,0.408308342509787,0,1.34323515528495,0,4.20353779773547,0.910161361938026,1.43723628363248,0,0.125118519871964,0,7.90159717585508,8.58165828237255,2.70428506031874,0.113432183160021,4.30535125653269,4.48470516518992,4.66250182551036,2.40072876867522,3.40073346486848,3.60696756063881,5.21127197728451,3.20675031258406,7.79496041289589,2.27190396819703,2.94559675655358,1.13152239773168,1.77504796258307,1.41052937518696,1.3564847384839,0,0.818238361772504,0.286804595389004,0.243947412259191,0.927708378250397,0.464775771478074,1.24393266018445,0.504641701751257,0,1.56449532329816,1.28648187638577,0,1.85747171212792,0.721879481669586,1.77460200059766,1.51726221070292,3.13314338848527,1.65440959098591,1.74303555273925,2.13543557199987,1.8876383142423,1.56977172100277,2.30848294167834,0,4.20725321410337,0.4115740113314,0,0,0.982827216677626,0,0,2.45976877086227,0.343135620597051,1.97550513735526,0,0,0,1.3032332212413,3.11980435583874,0,0.463721619900307,0,0,0,0,4.74122638775565,2.57545848628462,0,0,0,0,5.20744597416465,1.70130116690864,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,3.74637576323797,1.52795370223311,0,0,1.23392991243988,1.20137223137567,0.571652865261156,0.224262168690721,0.43596006883328,0.2933531432838,1.03417372606222,3.57656445851882,0,0,0,8.48784335065069,8.5109479213967,9.32477626556348,0.142977993658148,4.88359444852299,4.93944202068461,0.65147236858747,0,0,0,0,0,0,0,0,0,2.29723871668228,15.690059554479,2.75084482668401,3.08214483825575,7.52056045607561,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.613457458595699,3.00102312635806,4.6115054028955,0.623912584592421,1.07057393278297,0,0.35142424497814,6.01892199455438,2.27407504055985,2.0694614258501,5.31380478828349,4.79359838208428,0.173767228936166,0.391602314925481,7.20601190002797,0,0,0,0,0,0,0.496215615637554,0.767309866440312,3.36792113319688,0.256278298511402,3.58195074346692,0.160853921143607,0,2.00472601943452,0.710246901252508,0.9033987161519,0.519254429183621,0.697262270759755,6.88898862672247,0,1.19705285616665,0,0.182091168006717,0,1.35359883872224,0.385076685522074,3.13739907670742,4.38417673959782,0.633309773357254,0,0.510281115829547,0,0,0,1.00337954770971,1.01950509218015,0,1.34324852833307,0,0,0,0,0,2.26690225624989,3.93748698718877,2.55779449753823,2.29706215198469,5.20048196829217,0,1.93341436584244,0.616194468458578,1.38153307253517,3.44591431211326,0.214840489736547,0.725083469571143,2.21589231281862,3.82837753280971,0.165284915360978,0.960950336825531,0.255225424989168,1.2138933702666,0.464845549297286,0.31481234683064,0.6970372701606,1.54016790088044,1.06461206063404,0,1.29726953372744,0.143124886741991,0,0.316379424718726,0.38126038784765,0,0,0.318203247925937,0,0,0.274537029736055,0,0.606547444719948,0,1.26377536871694,0,0,0,0.272999822815972,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0.30982349809975,0.845086807596724,0.573645408816206,0,0,0,5.9110137883346,18.4405140057545,0.75894634753143,6.29882496440969,0.0962221127255121,0.670302275535787,0,1.88287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,2.69544237579135,0,0.144269212976445,0.213425530045242,20.5659891820181,0,0.191505370132367,0,14.2833653720804,1.12318871245384,0.684704037099577,0.783399478865116,7.51903431270201,0,0.481764225311099,4.43959355820305,41.3070850559617,8.93113896364988,17.5127235655821,14.0915947972222,12.680534770105,3.71237381263877,0,0,0,0,0,0,3.22317994398167,0,0,6.25099522974109,0,0,0,0,0.422008249231538,0.222617410045812,0.824019371133798,0,4.98119970627674,0,0.503865495708552,1.84083628503879,0,0.933118762985422,0,1.79021174675609,7.67358555340308,0.887790650732402,0,2.22273980289274,0.969332746095218,0.0927680981618513,0,24.480209542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| |||
|short_description=p3@IRX3 | |||
}} |
Revision as of 03:36, 12 January 2014
Short description: | p3@IRX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IRX3_5end |
Coexpression cluster: | C3570_glassy_seminal_salivary_left_heart_lung_teratocarcinoma |
Association with transcript: | 0bp_to_ENST00000558180_5end |
EntrezGene: | IRX3 |
HGNC: | 14360 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 7.99e-08 | 15 |
chordal neural plate | 7.99e-08 | 15 |