FFCP PHASE1:Hg19::chr16:71560034..71560052,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10164 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1972 | |||
|TSSclassifier=weak | |||
|UniProt=Q8NCG5 | |||
|association_with_transcript=0bp_to_ENST00000338482_5end | |||
|coexpression_cluster_id=C346 | |||
|description=CAGE_peak_2_at_CHST4_5end | |||
|id=chr16:71560034..71560052,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.25e-15!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.17e-33;6!CL:0000404;1.17e-33;6!CL:0002322;1.93e-18;5!CL:0002319;5.00e-08;25!CL:0002321;8.83e-07;15!CL:0000306;9.10e-07;4!CL:0002222;9.10e-07;4!CL:0002224;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.17e-33,6;CL:0000031,1.17e-33,6;CL:0000404,1.17e-33,6;CL:0000047,1.85e-25,8;CL:0002322,1.48e-18,5;CL:0002319,5.00e-08,25;CL:0000306,9.63e-07,4;CL:0002222,9.63e-07,4;CL:0002224,9.63e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000031;1.17e-33;6!UBERON:0006242;1.07e-23;1!UBERON:0004161;5.00e-09;11!UBERON:0009497;8.89e-08;13 | |||
|ontology_enrichment_disease=DOID:74!6.14e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!4.90e-09!3;UBERON:0005290!4.90e-09!3;UBERON:0010096!4.90e-09!3;UBERON:0004733!5.55e-08!12;UBERON:0002028!5.55e-08!12;UBERON:0007277!5.55e-08!12;UBERON:0004732!2.59e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;8.31e-09;3!UBERON:0010077;9.10e-07;4!UBERON:0005389;9.10e-07;4!UBERON:0000484;9.10e-07;4!UBERON:0000965;9.10e-07;4!UBERON:0001803;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,8.31e-09,3;UBERON:0006242,8.31e-09,3;UBERON:0010077,9.63e-07,4;UBERON:0005389,9.63e-07,4;UBERON:0000484,9.63e-07,4;UBERON:0002546,9.63e-07,4;UBERON:0000965,9.63e-07,4;UBERON:0001803,9.63e-07,4;UBERON:0003073,9.63e-07,4;UBERON:0005426,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82960559194393,1.98794652482228,0.69716365721711,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4591967422283,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0.508039992394707,0,0,2.08979093004525,1.51293380256957,2.49264202817511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,1.17241786942466,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0.438568099157414,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0.422624246717254,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.225630985047772,0,2.34454203369928,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.645499848534087,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CHST4 | |||
}} |
Revision as of 12:10, 20 January 2014
Short description: | p2@CHST4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHST4_5end |
Coexpression cluster: | C346_gall_ductus_seminal_temporal_duodenum_Hepatocyte_liver |
Association with transcript: | 0bp_to_ENST00000338482_5end |
EntrezGene: | CHST4 |
HGNC: | 1972 |
UniProt: | Q8NCG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.17e-33 | 6 |
neuroblast | 1.17e-33 | 6 |
electrically signaling cell | 1.17e-33 | 6 |
neuronal stem cell | 1.85e-25 | 8 |
embryonic stem cell | 1.48e-18 | 5 |
neural cell | 5.00e-08 | 25 |
crystallin accumulating cell | 9.63e-07 | 4 |
vertebrate lens cell | 9.63e-07 | 4 |
lens epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 8.31e-09 | 3 |
gall bladder primordium | 8.31e-09 | 3 |
cuboidal epithelium | 9.63e-07 | 4 |
transparent eye structure | 9.63e-07 | 4 |
simple cuboidal epithelium | 9.63e-07 | 4 |
cranial placode | 9.63e-07 | 4 |
lens of camera-type eye | 9.63e-07 | 4 |
epithelium of lens | 9.63e-07 | 4 |
lens placode | 9.63e-07 | 4 |
lens vesicle | 9.63e-07 | 4 |