FFCP PHASE1:Hg19::chr17:7792101..7792119,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1107 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1918 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000358181_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_10_at_CHD3_5end | |||
|id=chr17:7792101..7792119,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.68e-09!254;CL:0002076!1.17e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.57e-11;19!CL:0002536;2.59e-10;2!CL:0002537;5.98e-09;5!CL:0002577;6.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.34e-11,19;CL:0002536,1.25e-10,2;CL:0002537,4.82e-09,5;CL:0002577,4.97e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.47e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:171;1.77e-07;10!DOID:169;2.82e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.92e-07,10;DOID:169,3.03e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001950!7.27e-14!20;UBERON:0002619!9.19e-14!22;UBERON:0000956!1.87e-11!25;UBERON:0000203!1.87e-11!25;UBERON:0005631!2.22e-11!14;UBERON:0000158!2.22e-11!14;UBERON:0001869!1.75e-10!32;UBERON:0001893!1.66e-09!34;UBERON:0002791!5.29e-09!33;UBERON:0002020!1.43e-08!34;UBERON:0003528!1.43e-08!34;UBERON:0000478!2.46e-08!24;UBERON:0003124!3.85e-08!7;UBERON:0000924!2.96e-07!173;UBERON:0006601!2.96e-07!173;UBERON:0000064!3.55e-07!219;UBERON:0002780!6.88e-07!41;UBERON:0001890!6.88e-07!41;UBERON:0006240!6.88e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.73e-16;7!UBERON:0000478;5.35e-14;24!UBERON:0005631;1.82e-11;10!UBERON:0000158;1.82e-11;10!UBERON:0001987;1.08e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.20e-20,14;UBERON:0000158,5.20e-20,14;UBERON:0000305,8.10e-17,7;UBERON:0004871,1.10e-14,8;UBERON:0000478,3.83e-14,24;UBERON:0001987,1.09e-10,4;UBERON:0004340,1.09e-10,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,1.96597234917155,2.90143676051299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.327447688744282,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0,0.22452937262617,0,0,0,0,0,0,1.3082821564276,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,1.09750285408626,0,0.804231779293047,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.503946384596579,0.567100388969546,0.358234090811393,0,0.383382679165211,0,0.088048434013226,0,0,0,0,0.763976851116555,0,0,0,1.50171528921959,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,1.17261385734044,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,0.909382714338778,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,1.19705285616665,0.114814448164607,0,0,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,1.30012049207304,0,0,0,0,0,0,0,0,0.445160178233687,0.826424576804891,0.960950336825531,1.02090169995667,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.673554789078584,0,0,0.376575203107117,0.86101074534246,0,1.7737206141467,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0.37428108081644,0,0,0,0,1.90995587790152,1.18785872333055,6.14321404198464,0,0.703347082052564,0,0,5.06700979507184,0,0,0,0,0,0,0,0.179021174675609,0,0.295930216910801,0,0,0,0.463840490809256,13.9729658600836,0.520855522170466,0.174919999992391,0,0.227586896570999,0,0.709163045303809,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0.438770794307945,0,1.39423744278603,0.0769502585037971,0,0.23056390438806,0.448788222048861,0.325942115766024,0.957003479195758,0.183195186803725,0.533034776018635,0,0,0,0,0.588187602953219,0,0,0,0,0,0,0,0,0,0,2.07564790076435,0.123563938946503,0.626531697032732,0,0,0,0,2.73930466504926,0,0,0,20.2008022676123,0,0,0,1.32930774541437,0.330991955875499,0.313932918407225,0,0.569219092059585,0.554698692052555,1.21491816834592,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0.451961481561065,0,0,0.50648636764703,2.93327074102205,0.0801588202515337,0,0,0,0,0,0,0,2.35694034616795,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,1.5476039091159,0.485996453264197,0.335434687599266,0,0,0,0.896436696664224,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,1.40963004463334,0,0,0,0,0,0,4.46838880439127,0,0,0,0,3.29813602125492,0.886068179966986,0.732157589411779,0.3755727921195,0,0,0,0,0,0.151649117541648,0,0,0,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0.414706207840855,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0.974301544196942,0.797189041880179,0.327130788511688,0,0,0,0.999936979274649,0,0,0,0,0,0.622077260032973,1.66262682694747,1.1860729253635,0,0.109209638192014,0,0.425149840203366,2.35477952092104,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.319267718114302,0,4.78936222821264,0.138314504928436,0.322951291263702,0,0.0981477185010256,0.471878893390961,0.917142992608395,1.03973099535304,0,0,0.198916222116275,0,0,0,0.261906694481422,0,0.295712172434091,0.270150338473579,0.781078098613847,0.413373593002368,0.507326481551255,4.37579847214576,0,0,0.351742488719241,0.511049710558381,0,0,0,0,1.1531308121143,0,0,0,0.328863867814245,0,0.333694205676207,0.156986185701028,0,0.280272163313789,0.913158720509496,0,0,0,0.158013611732727,0,0.695433089210318,0,0.414432328326074,0,0,0,0,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,1.19370465096821,0,0.11294608203896,0,0.301925687133347,0.0771741581079447,0,0.940634592723046,0,1.17838273550813,0,0,0,0,0,0,0,0.892769693028288,0.352894871715692,0,0,0,0,0.315543124386369,0.543931921527318,23.12658658804,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0.653150243690884,0,0.471464371102113,0.358611026963382,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@CHD3 | |||
}} |
Revision as of 13:43, 20 January 2014
Short description: | p10@CHD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CHD3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000358181_5end |
EntrezGene: | CHD3 |
HGNC: | 1918 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.34e-11 | 19 |
amniotic epithelial cell | 1.25e-10 | 2 |
amnion mesenchymal stem cell | 4.82e-09 | 5 |
placental epithelial cell | 4.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.20e-20 | 14 |
membranous layer | 5.20e-20 | 14 |
amnion | 8.10e-17 | 7 |
somatic layer of lateral plate mesoderm | 1.10e-14 | 8 |
extraembryonic structure | 3.83e-14 | 24 |
placenta | 1.09e-10 | 4 |
allantois | 1.09e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.92e-07 | 10 |
neuroendocrine tumor | 3.03e-07 | 6 |