FFCP PHASE1:Hg19::chr17:26697304..26697335,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=645832,7448 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32942,12724 | |||
|TSSclassifier=strong | |||
|UniProt=C9JDG5,D9ZGG2,P04004 | |||
|association_with_transcript=37bp_to_ENST00000536498,NM_000638,uc002hbc.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_SEBOX_5end,CAGE_peak_1_at_VTN_5end | |||
|id=chr17:26697304..26697335,- | |||
|ontology_enrichment_celltype=CL:0000077!1.84e-11!19;CL:0000181!4.33e-08!12;CL:0000417!4.33e-08!12;CL:0000668!4.33e-08!12;CL:0000414!4.33e-08!12;CL:0000412!4.33e-08!12;CL:0000182!4.33e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.15e-15;19!CL:0000182;2.10e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.78e-15,19;CL:0000182,2.12e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;7.00e-14;31!UBERON:0004161;1.59e-12;11!UBERON:0009497;3.60e-12;13!UBERON:0001041;8.67e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003929!9.96e-12!54;UBERON:0002107!3.57e-11!19;UBERON:0006925!3.57e-11!19;UBERON:0008836!3.57e-11!19;UBERON:0009497!4.60e-11!25;UBERON:0000015!4.60e-11!25;UBERON:0002423!4.60e-11!25;UBERON:0006235!4.60e-11!25;UBERON:0004161!4.60e-11!25;UBERON:0009854!1.90e-10!23;UBERON:0002417!3.10e-10!61;UBERON:0000916!3.10e-10!61;UBERON:0008835!5.20e-10!22;UBERON:0003894!5.20e-10!22;UBERON:0005057!2.23e-09!26;UBERON:0004921!1.10e-08!129;UBERON:0004185!1.10e-08!129;UBERON:0007100!1.28e-08!27;UBERON:0009856!1.85e-08!26;UBERON:0003914!2.23e-08!118;UBERON:0003104!2.33e-08!238;UBERON:0009142!2.33e-08!238;UBERON:0005172!2.95e-08!55;UBERON:0005173!2.95e-08!55;UBERON:0007499!4.85e-08!25;UBERON:0001048!6.63e-08!168;UBERON:0005911!1.41e-07!82;UBERON:0002368!1.99e-07!35;UBERON:0000077!2.45e-07!130;UBERON:0001737!2.56e-07!9;UBERON:0001007!4.04e-07!155;UBERON:0001555!4.04e-07!155;UBERON:0007026!4.04e-07!155;UBERON:0000490!5.09e-07!138;UBERON:0009569!5.58e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.56e-13;19!UBERON:0006925;1.56e-13;19!UBERON:0002423;1.81e-12;25!UBERON:0001737;4.26e-09;9!UBERON:0001557;4.26e-09;9!UBERON:0002368;8.16e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.30e-13,19;UBERON:0006925,1.30e-13,19;UBERON:0008836,1.30e-13,19;UBERON:0008835,9.45e-13,22;UBERON:0003894,9.45e-13,22;UBERON:0009497,1.67e-12,25;UBERON:0000015,1.67e-12,25;UBERON:0002423,1.67e-12,25;UBERON:0006235,1.67e-12,25;UBERON:0004161,1.67e-12,25;UBERON:0009854,5.19e-12,23;UBERON:0003929,1.46e-11,54;UBERON:0002417,2.70e-11,60;UBERON:0000916,2.70e-11,60;UBERON:0005172,3.10e-11,54;UBERON:0005173,3.10e-11,54;UBERON:0007499,1.03e-10,25;UBERON:0009856,3.82e-10,26;UBERON:0004921,1.26e-09,118;UBERON:0001737,3.15e-09,9;UBERON:0005911,2.78e-08,82;UBERON:0002368,8.65e-08,35;UBERON:0003104,1.27e-07,160;UBERON:0009142,1.27e-07,160;UBERON:0001041,1.30e-07,87;UBERON:0001007,4.34e-07,145;UBERON:0001555,4.34e-07,145;UBERON:0007026,4.34e-07,145;UBERON:0002530,5.26e-07,59;UBERON:0002365,6.97e-07,31;UBERON:0002330,6.97e-07,31 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,2.00146596706261,0.893922188854576,3.48935409640147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,2.01210257911091,2.81297636055767,1.44575660953827,1.00267582127178,1.73815822752988,0,0.486634870302636,0,0.221729397462564,0.087834785693126,7.26933869012305,0,0,3.8945687238562,2.43781632218974,3.0580330919339,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,1.01304409331664,0.529636723252875,3.44203944898576,0.709336764396714,1.68203280042692,0,0.98667019366864,0.933633106199299,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0.30648779579902,0.600952235626387,0.453728732640084,0,0,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0.584622030967192,0,0,13.5782687727802,0,0,0,0,0,0,0,0.132529768321485,4.06678800043314,4.25010325563019,4.79409616663694,0.36497735907583,0,0,0,0,0,2.72105640091641,3.20310911148393,4.09718750801919,3.41911315470421,2.61455332910887,3.32178866755535,1.8876383142423,1.76599318612811,0.769494313892781,0.738155454624648,0,4.9388881359768,2.94017422771084,5722.98982220566,4316.57713564813,3358.64061948378,0,379.911286659678,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,4.78305348303778,3.57656445851882,0,1.06375246633948,1.04007436911366,0,0,0,0.57191197463259,24.9605938480064,1.64648067356154,0,0.710783897485092,0,42.5029521654016,4.35766729300147,44.1880621024692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,0.356857977594324,0.788512075169673,0.35142424497814,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0,0.280660094433074,0.384417447767103,2.04682899626681,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,125.693827575287,0,0,7.46293913069944,1.27463817604702,1.70461739447251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31205858279882,0.650756789328606,2150.15679005302,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0.929691098594572,1.5740617341532,0,1.23213432070436,0,0,0,0.572499546967965,0,0.632758849437452,4.95638504201945,0.767693373934002,0.42793898803392,0.318203247925937,0,0.539617372749944,0,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0.974853958525138,1.05650146756755,0.682499557039929,4.10075752665767,2.26016233240486,0,0,2.19225442626881,0,0.655894752046633,0.608731130888112,0,0.845086807596724,0.143411352204052,9.82490410131212,0.7133421029625,0,3.79993743535795,8.56166721695745,0,0.349934720244983,0,0,0,2111.55130762238,0,0,0,0,0,0,0,0,0,0,0,0,4.16613877397145,12.5122381184237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,2.11125408127993,0.398495976502139,0.828851746593443,39.5534414131213,0,0,0,0,1.25314822272926,0,0.591860433821602,0,0,78.5159524337127,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83240005149374,0,0.0769502585037971,22.1047588343182,0,0.269272933229316,0.54323685961004,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,277.758785367694,0,0,0.884575645033392,0,0,0.123563938946503,0.104421949505455,0.471807930864739,0.802577647298789,0,0,0,0,2.36750641709634,4.83962864194656,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,10.6431964417994,11.8404693679621,8.37577661942734,0,0.353024506766001,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,14.3013506475366,0.39961921916426,0,0,8.92293988882216,0,0,0.942776138467182,0.951329442515298,1.882851233622,0,0.866851769704557,0,0,0,2.57859264851974,0,2.51354161145029,3.66656678418694,0,9.58459202395157,16.3105898291897,3.12440040418622,0.604651252380536,0,17.4743924291181,83.4313900633498,82.4158583811665,84.0522191861686,67.7181072821472,0,0,0,0,0,0,0,0,0,0,0.236417121897595,2.30800187793992,0,6.8129188946481,0,19.2967738120809,3.31045985182716,3.81402806482125,1.08599920350743,1.72844298240254,0,0,0,0,0.339936274560377,6880.18771448494,3780.42154066567,0,0,11.8049918140187,0,0.106787412567695,0,0.414239055347196,3.96932817449561,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.310482014706917,0.138348634936231,0,0,0,0,0,0,0,0,1.66441758450784,0,0,0,0.915360273587694,1.66354016139563,0.310874401165561,1.33069634990671,0.159296767163702,0,0.155262956876259,0,0,0,5.86004675089152,11.8049615772327,0,0,0.537052785212442,0,0,0,0,0,2.52369796457302,2.31143796488764,23.3741334598669,3.65392008751296,1.36023555307363,0.926089897295336,1.95789363605174,0,35.5121664235118,45.8303663619498,1.76689145945881,30.6733320850755,2.70307905044916,0,6.90860683462397,0.607719912354764,0,2.33832370607266,0.930053882193542,0.32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| |||
|short_description=p1@SEBOX,p1@VTN | |||
}} |
Revision as of 14:23, 20 January 2014
Short description: | p1@SEBOX, p1@VTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEBOX_5end, CAGE_peak_1_at_VTN_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 37bp_to_ENST00000536498, NM_000638, uc002hbc.2_5end |
EntrezGene: | 645832,7448 |
HGNC: | 12724&submit=Submit 32942, 12724 |
UniProt: | C9JDG5D9ZGG2P04004 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.78e-15 | 19 |
hepatocyte | 2.12e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.30e-13 | 19 |
digestive gland | 1.30e-13 | 19 |
liver bud | 1.30e-13 | 19 |
hepatic diverticulum | 9.45e-13 | 22 |
liver primordium | 9.45e-13 | 22 |
epithelium of foregut-midgut junction | 1.67e-12 | 25 |
anatomical boundary | 1.67e-12 | 25 |
hepatobiliary system | 1.67e-12 | 25 |
foregut-midgut junction | 1.67e-12 | 25 |
septum transversum | 1.67e-12 | 25 |
digestive tract diverticulum | 5.19e-12 | 23 |
gut epithelium | 1.46e-11 | 54 |
abdominal segment of trunk | 2.70e-11 | 60 |
abdomen | 2.70e-11 | 60 |
abdomen element | 3.10e-11 | 54 |
abdominal segment element | 3.10e-11 | 54 |
epithelial sac | 1.03e-10 | 25 |
sac | 3.82e-10 | 26 |
subdivision of digestive tract | 1.26e-09 | 118 |
larynx | 3.15e-09 | 9 |
endo-epithelium | 2.78e-08 | 82 |
endocrine gland | 8.65e-08 | 35 |
mesenchyme | 1.27e-07 | 160 |
entire embryonic mesenchyme | 1.27e-07 | 160 |
foregut | 1.30e-07 | 87 |
digestive system | 4.34e-07 | 145 |
digestive tract | 4.34e-07 | 145 |
primitive gut | 4.34e-07 | 145 |
gland | 5.26e-07 | 59 |
exocrine gland | 6.97e-07 | 31 |
exocrine system | 6.97e-07 | 31 |