FFCP PHASE1:Hg19::chr17:39150411..39150417,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=85293 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18890 | |||
|TSSclassifier=weak | |||
|UniProt=Q9BYR6 | |||
|association_with_transcript=-26bp_to_ENST00000391586,NM_033185,uc002hvr.1_5end | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_1_at_KRTAP3-3_5end | |||
|id=chr17:39150411..39150417,- | |||
|ontology_enrichment_celltype=CL:0002620!5.65e-12!23;CL:0002601!2.16e-09!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.16e-29;1!UBERON:0008814;1.54e-15;2!UBERON:0010056;1.54e-15;2 | |||
|ontology_enrichment_disease=DOID:178!1.84e-09!1;DOID:326!1.84e-09!1;DOID:3978!1.84e-09!1;DOID:3394!1.84e-09!1;DOID:5844!1.84e-09!1;DOID:4362!1.36e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:4362;4.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,4.79e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001042!2.86e-13!10;UBERON:0009145!2.86e-13!10;UBERON:0001723!3.90e-12!3;UBERON:0001033!3.90e-12!3;UBERON:0010056!3.90e-12!3;UBERON:0006562!4.43e-12!11;UBERON:0007029!8.68e-10!1;UBERON:0002426!1.12e-09!1;UBERON:0003831!1.12e-09!1;UBERON:0003898!1.12e-09!1;UBERON:0004830!1.12e-09!1;UBERON:0001774!1.12e-09!1;UBERON:0003830!1.12e-09!1;UBERON:0005175!1.12e-09!1;UBERON:0003897!1.12e-09!1;UBERON:0001103!1.12e-09!1;UBERON:0010084!1.12e-09!1;UBERON:0002097!4.91e-09!40;UBERON:0002370!6.73e-09!4;UBERON:0005058!6.73e-09!4;UBERON:0009113!6.73e-09!4;UBERON:0003295!6.73e-09!4;UBERON:0005562!6.73e-09!4;UBERON:0008814!6.73e-09!15;UBERON:0002199!6.06e-08!45;UBERON:0002416!6.06e-08!45;UBERON:0001557!4.77e-07!19;UBERON:0003102!7.12e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.64e-38;3!UBERON:0001033;1.64e-38;3!UBERON:0007029;9.99e-30;1!UBERON:0002426;2.05e-29;1!UBERON:0003831;2.05e-29;1!UBERON:0003898;2.05e-29;1!UBERON:0004830;2.05e-29;1!UBERON:0003830;2.05e-29;1!UBERON:0005175;2.05e-29;1!UBERON:0001774;2.05e-29;1!UBERON:0001103;2.05e-29;1!UBERON:0005090;1.91e-15;2!UBERON:0001630;1.91e-15;2!UBERON:0000014;1.82e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.49e-38,3;UBERON:0001033,1.49e-38,3;UBERON:0010056,1.49e-38,3;UBERON:0007029,9.99e-30,1;UBERON:0002426,2.37e-29,1;UBERON:0003831,2.37e-29,1;UBERON:0003898,2.37e-29,1;UBERON:0004830,2.37e-29,1;UBERON:0003830,2.37e-29,1;UBERON:0005175,2.37e-29,1;UBERON:0001774,2.37e-29,1;UBERON:0001103,2.37e-29,1;UBERON:0010084,2.37e-29,1;UBERON:0005090,2.05e-15,2;UBERON:0001630,2.05e-15,2;UBERON:0001042,2.37e-12,10;UBERON:0009145,2.37e-12,10;UBERON:0006562,2.55e-11,11;UBERON:0000014,1.82e-08,4;UBERON:0008814,2.77e-07,18;UBERON:0001557,6.01e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0.515281080091258,1.30281799432113,0,0,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,381.045093113423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,6.42062117839031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,116.084927341134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.31037357147929,0,0,0,19.5945073107265,6.50243272062034,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0.201273793591026,0 | |||
|short_description=p1@KRTAP3-3 | |||
}} |
Revision as of 15:15, 20 January 2014
Short description: | p1@KRTAP3-3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KRTAP3-3_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | -26bp_to_ENST00000391586, NM_033185, uc002hvr.1_5end |
EntrezGene: | KRTAP3-3 |
HGNC: | 18890 |
UniProt: | Q9BYR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 1.49e-38 | 3 |
gustatory system | 1.49e-38 | 3 |
future tongue | 1.49e-38 | 3 |
surface | 9.99e-30 | 1 |
chest muscle | 2.37e-29 | 1 |
respiratory system muscle | 2.37e-29 | 1 |
skeletal muscle of trunk | 2.37e-29 | 1 |
respiratory system skeletal muscle | 2.37e-29 | 1 |
thoracic segment muscle | 2.37e-29 | 1 |
chest organ | 2.37e-29 | 1 |
muscle of trunk | 2.37e-29 | 1 |
diaphragm | 2.37e-29 | 1 |
future diaphragm | 2.37e-29 | 1 |
muscle structure | 2.05e-15 | 2 |
muscle organ | 2.05e-15 | 2 |
chordate pharynx | 2.37e-12 | 10 |
pharyngeal region of foregut | 2.37e-12 | 10 |
pharynx | 2.55e-11 | 11 |
zone of skin | 1.82e-08 | 4 |
pharyngeal arch system | 2.77e-07 | 18 |
upper respiratory tract | 6.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.79e-07 | 5 |