FFCP PHASE1:Hg19::chr17:67171909..67171949,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10349 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000519732,uc010wqs.1_5end | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_6_at_ABCA10_5end | |||
|id=chr17:67171909..67171949,- | |||
|ontology_enrichment_celltype=CL:0002621!5.34e-09!3;CL:0000083!1.49e-07!4;CL:0000244!2.32e-07!4;CL:0000731!2.32e-07!4;CL:0002251!4.85e-07!21;CL:0000223!6.20e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000083;2.84e-19;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,2.71e-19,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.52e-22!14;DOID:305!4.13e-08!106;DOID:1793!1.49e-07!4;DOID:4074!3.84e-07!2;DOID:4905!3.84e-07!2;DOID:3498!3.84e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.28e-21;14!DOID:1793;2.84e-19;4!DOID:3111;4.28e-19;1!DOID:3603;4.28e-19;1!DOID:170;3.44e-13;6!DOID:3493;1.43e-10;2!DOID:4074;1.57e-10;2!DOID:4905;1.57e-10;2!DOID:3498;1.57e-10;2!DOID:4929;1.80e-10;2!DOID:299;3.72e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.62e-21,14;DOID:1793,2.71e-19,4;DOID:3111,3.91e-19,1;DOID:3603,3.91e-19,1;DOID:305,3.08e-13,106;DOID:170,3.34e-13,6;DOID:3493,1.43e-10,2;DOID:4074,1.57e-10,2;DOID:4905,1.57e-10,2;DOID:3498,1.57e-10,2;DOID:4929,1.72e-10,2;DOID:0050687,1.18e-09,143;DOID:299,3.64e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005910!3.76e-12!6;UBERON:0000161!1.32e-11!35;UBERON:0004119!2.46e-11!169;UBERON:0000925!2.46e-11!169;UBERON:0006595!2.46e-11!169;UBERON:0001264!1.79e-10!10;UBERON:0003922!1.79e-10!10;UBERON:0003923!1.79e-10!10;UBERON:0003924!1.79e-10!10;UBERON:0003921!1.79e-10!10;UBERON:0002114!2.62e-10!12;UBERON:0000365!6.82e-10!5;UBERON:0001045!1.93e-09!11;UBERON:0002075!3.30e-09!18;UBERON:0003729!4.96e-09!5;UBERON:0001949!5.34e-09!3;UBERON:0002108!8.97e-09!14;UBERON:0000344!6.03e-08!12;UBERON:0001007!7.77e-08!155;UBERON:0001555!7.77e-08!155;UBERON:0007026!7.77e-08!155;UBERON:0000166!4.64e-07!21;UBERON:0003343!4.80e-07!4;UBERON:0004785!4.80e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;7.08e-19;4!UBERON:0004785;7.08e-19;4!UBERON:0001264;4.85e-17;10!UBERON:0000974;6.31e-13;6!UBERON:0002075;9.39e-10;18!UBERON:0000344;1.11e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,6.77e-19,4;UBERON:0004785,6.77e-19,4;UBERON:0001264,4.72e-17,10;UBERON:0002075,9.25e-10,18;UBERON:0000344,1.08e-08,20;UBERON:0000974,3.90e-08,10;UBERON:0000949,9.34e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.311211035399766,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.34444334449382,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0.288666338176536,0,0,0,0,1.68471475667626,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00177834520615,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,10.9251170790342,0,0,0,0,0.150323419414493,0,0.664653872707185,0.661983911750998,2.19753042885058,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0.219267951258557,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0,0,0,0.363697318405119,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74813611802872,0,1.10057159113007,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,0,0,33.039757670195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892769693028288,2.11736923029415,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.814032686109745,0.213454691755431,0,3.23370727583713,0,0,0,0,0,0 | |||
|short_description=p6@ABCA10 | |||
}} |
Revision as of 17:02, 20 January 2014
Short description: | p6@ABCA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ABCA10_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | 0bp_to_ENST00000519732, uc010wqs.1_5end |
EntrezGene: | ABCA10 |
HGNC: | 30 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 2.71e-19 | 4 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 6.77e-19 | 4 |
respiratory system mucosa | 6.77e-19 | 4 |
pancreas | 4.72e-17 | 10 |
viscus | 9.25e-10 | 18 |
mucosa | 1.08e-08 | 20 |
neck | 3.90e-08 | 10 |
endocrine system | 9.34e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.62e-21 | 14 |
pancreatic cancer | 2.71e-19 | 4 |
cystadenocarcinoma | 3.91e-19 | 1 |
mucinous cystadenocarcinoma | 3.91e-19 | 1 |
carcinoma | 3.08e-13 | 106 |
endocrine gland cancer | 3.34e-13 | 6 |
signet ring cell adenocarcinoma | 1.43e-10 | 2 |
pancreas adenocarcinoma | 1.57e-10 | 2 |
pancreatic carcinoma | 1.57e-10 | 2 |
pancreatic ductal adenocarcinoma | 1.57e-10 | 2 |
tubular adenocarcinoma | 1.72e-10 | 2 |
cell type cancer | 1.18e-09 | 143 |
adenocarcinoma | 3.64e-07 | 25 |