FFCP PHASE1:Hg19::chr17:72667483..72667484,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=326624 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30268 | |||
|TSSclassifier=not | |||
|UniProt=A8MUU7 | |||
|association_with_transcript=164bp_to_ENST00000392617_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_18_at_RAB37_5end | |||
|id=chr17:72667483..72667484,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!8.67e-44!6;UBERON:0001049!4.85e-40!57;UBERON:0005068!4.85e-40!57;UBERON:0006241!4.85e-40!57;UBERON:0007135!4.85e-40!57;UBERON:0002616!1.10e-38!59;UBERON:0004733!8.22e-35!12;UBERON:0002028!8.22e-35!12;UBERON:0007277!8.22e-35!12;UBERON:0000955!1.36e-32!69;UBERON:0006238!1.36e-32!69;UBERON:0004732!3.74e-32!13;UBERON:0002680!3.49e-30!9;UBERON:0001895!3.49e-30!9;UBERON:0010092!3.49e-30!9;UBERON:0003076!6.74e-28!15;UBERON:0003057!6.74e-28!15;UBERON:0001017!1.93e-27!82;UBERON:0003075!1.81e-26!86;UBERON:0007284!1.81e-26!86;UBERON:0005743!3.68e-26!86;UBERON:0002037!6.62e-26!6;UBERON:0006215!6.62e-26!6;UBERON:0002346!2.83e-25!90;UBERON:0001869!6.09e-24!32;UBERON:0000073!1.15e-23!94;UBERON:0001016!1.15e-23!94;UBERON:0002771!5.76e-23!3;UBERON:0001893!1.47e-22!34;UBERON:0007023!7.70e-20!115;UBERON:0001950!1.13e-19!20;UBERON:0002780!9.38e-19!41;UBERON:0001890!9.38e-19!41;UBERON:0006240!9.38e-19!41;UBERON:0003080!2.60e-18!42;UBERON:0000033!3.45e-18!123;UBERON:0002619!5.65e-18!22;UBERON:0007190!1.22e-17!1;UBERON:0002581!1.44e-17!1;UBERON:0001882!1.70e-17!1;UBERON:0005403!1.70e-17!1;UBERON:0000153!2.56e-17!129;UBERON:0007811!2.56e-17!129;UBERON:0002791!3.23e-17!33;UBERON:0002020!1.01e-16!34;UBERON:0003528!1.01e-16!34;UBERON:0000956!6.47e-16!25;UBERON:0000203!6.47e-16!25;UBERON:0001872!3.84e-14!5;UBERON:0004121!5.56e-13!169;UBERON:0000924!1.15e-12!173;UBERON:0006601!1.15e-12!173;UBERON:0003056!1.35e-12!61;UBERON:0000025!2.43e-11!194;UBERON:0000064!6.10e-10!219;UBERON:0001870!1.33e-09!2;UBERON:0002298!3.01e-09!8;UBERON:0001871!3.14e-09!7;UBERON:0004111!6.04e-09!241;UBERON:0000477!2.24e-07!286;UBERON:0000988!6.88e-07!3;UBERON:0001896!9.12e-07!3;UBERON:0005290!9.12e-07!3;UBERON:0010096!9.12e-07!3;UBERON:0000483!9.54e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.20e-09;53!UBERON:0002616;8.20e-09;53!UBERON:0001016;9.23e-08;83!UBERON:0000955;1.65e-07;68!UBERON:0001017;8.56e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,1.54810963903714,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@RAB37 | |||
}} |
Revision as of 17:13, 20 January 2014
Short description: | p18@RAB37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_RAB37_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 164bp_to_ENST00000392617_5end |
EntrezGene: | RAB37 |
HGNC: | 30268 |
UniProt: | A8MUU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.83e-98 | 6 |
rhombic lip | 1.83e-98 | 6 |
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |