FFCP PHASE1:Hg19::chr17:74533763..74533773,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114757 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16505 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WWM9 | |||
|association_with_transcript=8bp_to_ENST00000293230,NM_134268,uc002jru.1_5end | |||
|coexpression_cluster_id=C1231 | |||
|description=CAGE_peak_5_at_CYGB_5end | |||
|id=chr17:74533763..74533773,- | |||
|ontology_enrichment_celltype=CL:0000055!3.93e-13!180;CL:0000325!7.27e-10!39;CL:0000183!4.95e-09!59;CL:0000680!6.86e-08!57;CL:0000056!6.86e-08!57;CL:0000355!6.86e-08!57;CL:0000187!8.27e-08!54;CL:0002077!5.89e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.48e-07;13!CL:0002334;2.88e-07;12!CL:0000148;4.60e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.79e-07,15;CL:0002077,3.83e-07,34;CL:0002334,3.98e-07,12;CL:0000148,5.27e-07,10;CL:0000541,5.27e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.01e-19!365;UBERON:0000119!4.98e-17!312;UBERON:0000481!5.18e-17!347;UBERON:0000483!8.27e-17!309;UBERON:0000468!2.03e-11!659;UBERON:0000064!8.87e-11!219;UBERON:0000477!1.27e-10!286;UBERON:0005256!1.37e-10!143;UBERON:0000914!3.65e-10!83;UBERON:0002329!3.65e-10!83;UBERON:0003077!3.65e-10!83;UBERON:0003059!3.65e-10!83;UBERON:0007282!3.65e-10!83;UBERON:0009618!3.65e-10!83;UBERON:0007285!3.65e-10!83;UBERON:0000486!9.50e-10!82;UBERON:0002100!1.12e-09!216;UBERON:0003075!1.56e-09!86;UBERON:0007284!1.56e-09!86;UBERON:0000033!1.73e-09!123;UBERON:0000922!3.29e-09!612;UBERON:0000153!5.86e-09!129;UBERON:0007811!5.86e-09!129;UBERON:0000923!1.08e-08!604;UBERON:0005291!1.08e-08!604;UBERON:0006598!1.08e-08!604;UBERON:0002532!1.08e-08!604;UBERON:0002346!1.27e-08!90;UBERON:0002050!1.47e-08!605;UBERON:0005423!1.47e-08!605;UBERON:0000467!1.81e-08!625;UBERON:0000480!2.46e-08!626;UBERON:0007023!2.50e-08!115;UBERON:0004111!3.24e-08!241;UBERON:0004121!3.96e-08!169;UBERON:0004290!6.12e-08!70;UBERON:0000924!1.36e-07!173;UBERON:0006601!1.36e-07!173;UBERON:0001013!1.45e-07!14;UBERON:0003103!2.79e-07!69;UBERON:0002616!3.07e-07!59;UBERON:0002385!3.26e-07!63;UBERON:0001015!3.26e-07!63;UBERON:0000383!3.26e-07!63;UBERON:0003056!6.01e-07!61;UBERON:0001134!6.18e-07!61;UBERON:0002036!6.18e-07!61;UBERON:0003082!6.18e-07!61;UBERON:0000062!7.43e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;1.28e-08;8!UBERON:0000982;1.28e-08;8!UBERON:0004770;1.28e-08;8!UBERON:0001013;2.88e-08;14!UBERON:0004457;5.83e-08;9!UBERON:0000042;5.83e-08;9!UBERON:0010371;1.95e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,2.64e-09,8;UBERON:0000982,2.64e-09,8;UBERON:0004770,2.64e-09,8;UBERON:0000483,9.14e-09,306;UBERON:0000119,1.77e-08,309;UBERON:0001013,4.94e-08,14;UBERON:0000486,8.42e-08,83;UBERON:0003102,4.41e-07,99 | |||
|phase1_expression=7.44881355009282,1.71280419112787,2.53717927372748,0,1.78784437770915,3.48935409640147,2.53299878168311,1.26343974685366,1.56711376919903,1.47440361900905,0,0,1.31883489114227,1.73272894144065,1.65698687863958,0,0,0,0.487932798790507,0.61560529038394,0.816002764977012,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,3.67768489791571,4.2168828628955,0.739508020333575,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5045493051169,2.01210257911091,2.04580098949649,0,0,0.289693037921647,0,0.486634870302636,1.03988298880475,0.886917589850256,0.351339142772504,0.72038491523742,2.18577172975525,0.741568885568859,0.649094787309367,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,2.61656431285521,1.98788780678127,0.12663051166458,0.397227542439656,0.286836620748814,0.709336764396714,0,0,0.49333509683432,1.24484414159907,1.61652806483626,1.63461903113459,2.4217188423189,1.15235184896,0.468642863667593,1.5608003841516,1.1409436430889,1.19558944441441,0.23486899728753,0,0.280901613404497,0,1.59684612505298,0,1.18800285728205,0.741800787835671,0.910161361938026,5.74894513452991,0.336672227908132,0.500474079487857,0,0.438977620880838,0.30648779579902,0.600952235626387,1.02088964844019,0,0.640672166455702,0.423863802319124,0.300091096084402,0,0,0.18611685633159,0,0.389748020644795,0,0.276149695926898,0.484938170456436,0.355009592516614,0,0,7.92369497969517,4.09119180886252,8.03052867089211,0,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,1.2347220339942,1.47008711385542,0,0,0.590789906681404,0,0,1.54411029268673,8.78002283269004,2.24803506515239,0,1.574003567695,1.3032332212413,1.03993478527958,2.88662684050547,0.811512834825538,0.117408694235822,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0,0,0,7.49870671894216,5.20744597416465,2.69372684760534,0,0,0,0,0,0,0,0,3.61937997465364,9.54971063895694,12.8939191931052,13.6857956818164,7.40357947463929,2.10240140490742,14.0054951988983,0.784917590417525,0,0.66004457238855,0.387815147273333,7.15312891703765,0.845302752556,1.32969058292435,0,0.514414748524284,0,0.799266537048298,4.14636181608628,2.71310802695722,0.823240336780769,1.30294473717494,2.84313558994037,0.791951872933429,0,0,0.099972991182057,0,0,2.10833939483032,0.718874566474748,0,0,0,0.821905290201534,0.716243852959582,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.71768088406796,3.50119364741774,2.44138521329762,0,0,0,0,2.40756879782175,4.5481500811197,5.17365356462525,0,0.368738337083406,0.521301686808497,4.11182430671755,1.37257369524342,0,0,0,0.303127571446259,1.66435439510497,0,4.71404834855676,1.07423381301644,3.92924132206303,5.76626171650654,3.58195074346692,1.60853921143608,2.96836132889982,0,1.24293207719189,0.574890092096664,1.03850885836724,0.813472649219715,0,5.21316822788541,0,1.83703117063371,2.1850940160806,3.67148361886388,0.451199612907412,0.770153371044148,1.56869953835371,1.46139224653261,0.422206515571503,0,0,0.431831832204279,0,1.35473218771926,2.00675909541941,0.254876273045038,0.831076008928724,1.56712328305525,0,0,0.256450125116389,0,0,0.103041011647722,0,0,8.03971753194641,5.20048196829217,1.6068392984416,0.580024309752732,0.462145851343933,0.614014698904518,0.964856007391714,1.39646318328756,1.30515024522806,1.10794615640931,0.623224249527161,2.80984356113663,4.61256161676255,0.765676274967505,2.12431339796655,0.464845549297286,0.94443704049192,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0.744316738719335,0.949138274156178,0.953150969619124,4.09436466098134,1.71175595213568,2.86382923133343,0,4.49681143958287,3.56898138656871,3.18093486333353,1.41527737101321,0,0,4.8763373908959,0.243713489631284,2.11300293513511,2.72999822815972,6.6460553018245,2.26016233240486,2.75682671773062,0,0,5.78775534266688,4.59126326432643,0,0.92947049429925,0.281695602532241,0.286822704408103,0.294747123039363,0,0.354761064070598,1.89996871767898,3.29294892959902,1.13841952129715,3.49934720244983,1.63577591633371,0.670302275535787,3.26672954583968,0.282431402330337,3.44404298136984,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,1.9882952955326,1.1253553312841,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,1.1837208676432,0,0,0,1.20598527610407,0,0,0,0.724999575434793,0,0,0,0,0,0.694499979733169,0.885741385813839,0.723578631752448,0,0.442317039724898,0.886642856860642,0.87754158861589,0,0,0.692552326534174,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.32686346755009,0,0,0,0,0.134802265961354,0,2.34264445725339,0,0,0,0.394584402849391,2.41981432097328,1.22429104652196,1.26373159256976,0,0,0,0,0,0,0,0,1.90915712168644,0,0,0.34945333648406,0,0,0,0,0.387956065953678,2.29465929397901,1.58186518546373,0,0,1.07628353124994,0,0,2.34798294213288,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,1.27746588066972,0,0,2.51354161145029,0.916641696046735,1.43574604915363,0.599037001496973,0.858452096273142,0.446342914883745,0.604651252380536,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0.953423842781029,0,0,0,0,0,1.82248669974074,0,0.157611414598396,0.786818822024972,0,0,0.191915197319445,1.42939065274673,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.775697738169303,1.58679122091228,0.171086837884329,0,0.427149650270779,1.10043013569766,0.414239055347196,0.496166021811951,0,0,0,1.08803560673895,0.2506898940227,1.22538230705385,0.983617892129413,0,0,0.854183854313742,1.001527445652,0,0.332787154610557,0.683060432355218,0.138348634936231,0,4.09452617362449,5.70930667089935,0.470531639396343,0,0,1.34329322598187,1.16856654923612,0.554805861502613,0.568209015825267,2.76724691927833,1.77962244319307,0.915360273587694,1.20984739010591,0.310874401165561,0.295710299979268,0,0,0.776314784381297,0,0.53168342911599,0.521745061811734,0.300515217994437,0,0,1.63663793282303,0.214821114084977,0.464033759878494,0.398095888698616,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0.127894371303652,0.107824811396682,0,1.09209638192014,0,0,0.123935764259002,0,0.636008701306837,0,0,0,4.593682160298,0.899209151350433,0,0.319267718114302,2.46139637088906,0,2.48966108871184,0.484426936895553,0,0,0,0,0.115525666150338,0,0,0,0.752103283492572,0,0,0,0,0,0.87798860003913,0,0,1.14148458349032,0,0.548257766857182,0.992422356778588,0,0,1.60710550763486,0.336283722218824,0,0,0.532214220975833,0,0,0.747667062745149,1.71009211263408,0,0,1.25588948560822,0.157115589916002,0,0,0,0,0.78624198594322,0,0,0,4.81026818838152,0,0,0,0,0.354996002191696,0.340853619036631,0,0,0,0,0.111855431797792,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0.463044948647668,0.655678681511872,0,0.490296643507811,0,0.785233868459781,0.297046400327086,0,1.0195626881269,0.469919589899268,0.322289439867886,0,0,0,0,0,0,0.143339583151451,1.41994405973866,0.951880862672806,0,2.645134202577,1.11598505450025,1.84870251452567,0.432626562123789,0,0,0,0.305966489225945,0,0,0,0.909344378618873,0.267964130156178,0,0.103432995861895,0,0.714193294391221,0.0645889098360061,0.0620747142958579,0,0.445530107947154,0.606351566874658,0.435433495793923,0.342233301085281,0.134704106029175,0.430333232356058,0.332660356546013,0,0,0,0,0,0.488965776731466,0,0.665756774185513,0.603821380773079,0 | |||
|short_description=p5@CYGB | |||
}} |
Revision as of 17:28, 20 January 2014
Short description: | p5@CYGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CYGB_5end |
Coexpression cluster: | C1231_Melanocyte_Mallassezderived_Gingival_Keratinocyte_melanoma_Sebocyte_Mesenchymal |
Association with transcript: | 8bp_to_ENST00000293230, NM_134268, uc002jru.1_5end |
EntrezGene: | CYGB |
HGNC: | 16505 |
UniProt: | Q8WWM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.79e-07 | 15 |
ecto-epithelial cell | 3.83e-07 | 34 |
preadipocyte | 3.98e-07 | 12 |
melanocyte | 5.27e-07 | 10 |
melanoblast | 5.27e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
articulation | 2.64e-09 | 8 |
skeletal joint | 2.64e-09 | 8 |
articular system | 2.64e-09 | 8 |
epithelium | 9.14e-09 | 306 |
cell layer | 1.77e-08 | 309 |
adipose tissue | 4.94e-08 | 14 |
multilaminar epithelium | 8.42e-08 | 83 |
surface structure | 4.41e-07 | 99 |