FFCP PHASE1:Hg19::chr17:75446824..75446838,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |||
|TSSclassifier=weak | |||
|UniProt=Q9UHD8 | |||
|association_with_transcript=211bp_to_ENST00000431235,NM_001113496,uc002jty.3_5end | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_9_at_SEPT9_5end | |||
|id=chr17:75446824..75446838,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.12e-21!180;CL:0000183!3.94e-13!59;CL:0000393!5.50e-11!60;CL:0000211!5.50e-11!60;CL:0000187!6.69e-11!54;CL:0000680!2.30e-10!57;CL:0000056!2.30e-10!57;CL:0000355!2.30e-10!57;CL:0000057!1.96e-08!75;CL:0000192!5.33e-07!42;CL:0000514!5.33e-07!42;CL:0000222!8.44e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000393;8.55e-07;61!CL:0000211;8.55e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,2.21e-11,55;CL:0000393,2.92e-11,61;CL:0000211,2.92e-11,61;CL:0000680,2.13e-10,58;CL:0000056,2.13e-10,58;CL:0000355,2.13e-10,58;CL:0000057,1.41e-09,76;CL:0000192,7.32e-07,43;CL:0000514,7.32e-07,43;CL:0002494,9.80e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!9.41e-19!312;UBERON:0000483!1.87e-17!309;UBERON:0000475!2.80e-16!365;UBERON:0000481!3.57e-16!347;UBERON:0000914!7.53e-15!83;UBERON:0002329!7.53e-15!83;UBERON:0003077!7.53e-15!83;UBERON:0003059!7.53e-15!83;UBERON:0007282!7.53e-15!83;UBERON:0009618!7.53e-15!83;UBERON:0007285!7.53e-15!83;UBERON:0005256!3.98e-14!143;UBERON:0004290!2.70e-13!70;UBERON:0000477!3.54e-13!286;UBERON:0000468!1.42e-12!659;UBERON:0000467!2.65e-12!625;UBERON:0003075!3.87e-12!86;UBERON:0007284!3.87e-12!86;UBERON:0000480!4.69e-12!626;UBERON:0000033!1.52e-11!123;UBERON:0000153!1.72e-11!129;UBERON:0007811!1.72e-11!129;UBERON:0000025!1.87e-11!194;UBERON:0001134!2.05e-11!61;UBERON:0002036!2.05e-11!61;UBERON:0003082!2.05e-11!61;UBERON:0002385!2.20e-11!63;UBERON:0001015!2.20e-11!63;UBERON:0000383!2.20e-11!63;UBERON:0001017!2.33e-11!82;UBERON:0005743!2.48e-11!86;UBERON:0004121!3.07e-11!169;UBERON:0004111!3.89e-11!241;UBERON:0000073!4.66e-11!94;UBERON:0001016!4.66e-11!94;UBERON:0002616!8.31e-11!59;UBERON:0002346!9.71e-11!90;UBERON:0000486!1.55e-10!82;UBERON:0000924!2.43e-10!173;UBERON:0006601!2.43e-10!173;UBERON:0000922!5.12e-10!612;UBERON:0000955!1.66e-09!69;UBERON:0006238!1.66e-09!69;UBERON:0002050!1.73e-09!605;UBERON:0005423!1.73e-09!605;UBERON:0001049!2.51e-09!57;UBERON:0005068!2.51e-09!57;UBERON:0006241!2.51e-09!57;UBERON:0007135!2.51e-09!57;UBERON:0000923!3.13e-09!604;UBERON:0005291!3.13e-09!604;UBERON:0006598!3.13e-09!604;UBERON:0002532!3.13e-09!604;UBERON:0003103!3.25e-09!69;UBERON:0001009!1.45e-08!113;UBERON:0003056!2.20e-08!61;UBERON:0007100!3.30e-08!27;UBERON:0004872!4.11e-08!84;UBERON:0004535!8.57e-08!110;UBERON:0003914!1.05e-07!118;UBERON:0002049!3.33e-07!79;UBERON:0007798!3.33e-07!79;UBERON:0000948!3.92e-07!24;UBERON:0005498!3.92e-07!24;UBERON:0004140!3.92e-07!24;UBERON:0009881!3.92e-07!24;UBERON:0004141!3.92e-07!24;UBERON:0003084!3.92e-07!24;UBERON:0007005!3.92e-07!24;UBERON:0004139!3.92e-07!24;UBERON:0004291!3.92e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.45e-08;25!UBERON:0000948;8.28e-07;22!UBERON:0006876;8.28e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.83e-20,309;UBERON:0000483,5.44e-19,306;UBERON:0010314,3.09e-18,132;UBERON:0007503,7.06e-16,78;UBERON:0003104,1.46e-14,160;UBERON:0009142,1.46e-14,160;UBERON:0007524,2.04e-14,73;UBERON:0003077,3.12e-14,72;UBERON:0007285,3.12e-14,72;UBERON:0003075,3.55e-14,82;UBERON:0007284,3.55e-14,82;UBERON:0002329,6.61e-14,71;UBERON:0003059,6.61e-14,71;UBERON:0007282,6.61e-14,71;UBERON:0004290,6.61e-14,71;UBERON:0009618,6.61e-14,71;UBERON:0002346,5.89e-13,86;UBERON:0000025,6.69e-12,192;UBERON:0005256,7.67e-12,122;UBERON:0001017,1.32e-11,81;UBERON:0001134,1.41e-11,62;UBERON:0002036,1.41e-11,62;UBERON:0003082,1.41e-11,62;UBERON:0001016,2.05e-11,89;UBERON:0002385,2.44e-11,64;UBERON:0001015,2.44e-11,64;UBERON:0000383,2.44e-11,64;UBERON:0004111,2.89e-11,240;UBERON:0004121,3.64e-11,171;UBERON:0000924,3.64e-11,171;UBERON:0006601,3.64e-11,171;UBERON:0000486,3.81e-11,83;UBERON:0010371,1.75e-10,104;UBERON:0003103,2.93e-10,68;UBERON:0001049,9.10e-10,56;UBERON:0005068,9.10e-10,56;UBERON:0006241,9.10e-10,56;UBERON:0007135,9.10e-10,56;UBERON:0000955,1.00e-09,68;UBERON:0006238,1.00e-09,68;UBERON:0000073,3.70e-09,53;UBERON:0002616,3.70e-09,53;UBERON:0007100,4.23e-09,27;UBERON:0003056,1.39e-08,61;UBERON:0005423,4.50e-08,581;UBERON:0000948,7.39e-08,24;UBERON:0005498,7.39e-08,24;UBERON:0004140,7.39e-08,24;UBERON:0009881,7.39e-08,24;UBERON:0004141,7.39e-08,24;UBERON:0003084,7.39e-08,24;UBERON:0007005,7.39e-08,24;UBERON:0004139,7.39e-08,24;UBERON:0004291,7.39e-08,24;UBERON:0000922,8.80e-08,592;UBERON:0002050,1.44e-07,564;UBERON:0000923,1.58e-07,560;UBERON:0010316,1.58e-07,560;UBERON:0005291,1.58e-07,560;UBERON:0006598,1.58e-07,560;UBERON:0010317,1.58e-07,560;UBERON:0002532,1.58e-07,560;UBERON:0003914,2.59e-07,117;UBERON:0001869,3.33e-07,32;UBERON:0001009,4.18e-07,112;UBERON:0006876,5.26e-07,11;UBERON:0004872,5.31e-07,83;UBERON:0000490,5.76e-07,148;UBERON:0001893,6.37e-07,34;UBERON:0011216,7.55e-07,223 | |||
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| |||
|short_description=p9@SEPT9 | |||
}} |
Revision as of 17:35, 20 January 2014
Short description: | p9@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SEPT9_5end |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | 211bp_to_ENST00000431235, NM_001113496, uc002jty.3_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | Q9UHD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 2.21e-11 | 55 |
electrically responsive cell | 2.92e-11 | 61 |
electrically active cell | 2.92e-11 | 61 |
muscle precursor cell | 2.13e-10 | 58 |
myoblast | 2.13e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.13e-10 | 58 |
fibroblast | 1.41e-09 | 76 |
smooth muscle cell | 7.32e-07 | 43 |
smooth muscle myoblast | 7.32e-07 | 43 |
cardiocyte | 9.80e-07 | 16 |