FFCP PHASE1:Hg19::chr18:64271403..64271414,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28513 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1758 | |||
|TSSclassifier=strong | |||
|UniProt=Q96KY9 | |||
|association_with_transcript=0bp_to_ENST00000454642_5end | |||
|coexpression_cluster_id=C1803 | |||
|description=CAGE_peak_4_at_CDH19_5end | |||
|id=chr18:64271403..64271414,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.53e-07;1!CL:0002566;4.20e-07;1!CL:0000149;5.19e-07;4!CL:0000147;6.12e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.63e-07,1;CL:0000149,4.76e-07,4;CL:0000147,6.13e-07,14;CL:0002566,6.97e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.32e-15;4!UBERON:0007284;8.32e-15;4!UBERON:0006241;1.19e-08;3!UBERON:0003057;1.19e-08;3!UBERON:0004140;1.27e-07;1!UBERON:0010226;1.53e-07;1!UBERON:0010227;1.96e-07;1!UBERON:0009143;4.20e-07;1!UBERON:0006242;4.20e-07;1!UBERON:0005425;4.20e-07;1!UBERON:0004874;4.20e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003978;1.46e-19;3!UBERON:0000946;1.46e-19;3!UBERON:0004151;2.87e-19;3!UBERON:0007100;9.84e-19;25!UBERON:0000948;5.49e-17;22!UBERON:0002784;7.88e-14;4!UBERON:0002133;9.49e-14;2!UBERON:0002081;1.87e-13;2!UBERON:0001905;1.54e-12;2!UBERON:0002757;1.54e-12;2!UBERON:0010134;1.54e-12;2!UBERON:0005408;1.54e-12;2!UBERON:0001899;1.54e-12;2!UBERON:0002240;1.19e-08;3!UBERON:0005174;1.19e-08;3!UBERON:0001137;1.19e-08;3!UBERON:0001894;4.12e-08;7!UBERON:0002135;9.89e-08;1!UBERON:0002134;1.05e-07;1!UBERON:0005208;1.05e-07;1!UBERON:0004145;1.05e-07;1!UBERON:0005946;1.05e-07;1!UBERON:0005965;1.05e-07;1!UBERON:0002078;1.05e-07;1!UBERON:0002084;1.53e-07;1!UBERON:0002146;1.53e-07;1!UBERON:0002082;1.53e-07;1!UBERON:0005623;1.53e-07;1!UBERON:0002079;1.96e-07;1!UBERON:0002038;1.96e-07;1!UBERON:0009661;1.96e-07;1!UBERON:0002950;1.96e-07;1!UBERON:0001891;1.96e-07;1!UBERON:0000989;4.20e-07;1!UBERON:0000996;4.20e-07;1!UBERON:0000941;4.20e-07;1!UBERON:0001785;4.20e-07;1!UBERON:0002464;4.20e-07;1!UBERON:0004904;4.20e-07;1!UBERON:0008811;4.20e-07;1!UBERON:0001021;4.20e-07;1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.02512002659322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0159663086747,0.381988425558278,0,0,1.64523988325318,2.40274446275134,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27764876265012,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.438770794307945,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,1.94144542218394,0,0.0979923974143777,0,0,0,0,0,0,1.06687918137261,0,0.677942222341597,0,0,0.443175571691151,0,0,1.06726497369676,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,1.36905378891993,0,0,0,22.9011569043248,6.41649187232714,15.7932065406899,0.599037001496973,0,7.58782955302367,7.86046628094697,0,0,0,0,0,0.590564889088493,0,0,0.544813624446302,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.35857467866569,0,2.1440859791201,6.62091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0.387848869084652,1.71902382265497,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.751145584238999,1.14681839138014,0.887432412294818,0.372578417648301,1.66018361923477,0.124980407962107,0.758245587708239,1.42732666772484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,6.40456598628376,0,0,0.256916900385838,0,0.957803154342908,0,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0.620060389503552,0.19024743058172,0,0.548257766857182,1.98484471355718,0,0,1.07140367175657,1.00885116665647,0,0,0,0,0.342976018874837,0.475788130837822,0.0657727735628491,0,0,0.470958557103084,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,1.48523200163543,0.4226557275834,0,0.657887425858975,0.0644578879735772,0,0,0,0,0.730336388246517,0.917458566809082,2.15009374727177,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,2.0686599172379,0.426467963801962,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.653150243690884,0,0.134704106029175,0.932388670104793,0.332660356546013,0,0,0,0,0,0,0,1.33151354837103,0.402547587182052,0 | |||
|short_description=p4@CDH19 | |||
}} |
Revision as of 19:44, 20 January 2014
Short description: | p4@CDH19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDH19_5end |
Coexpression cluster: | C1803_heart_melanoma_nonsmall_left_Fibroblast_substantia_Melanocyte |
Association with transcript: | 0bp_to_ENST00000454642_5end |
EntrezGene: | CDH19 |
HGNC: | 1758 |
UniProt: | Q96KY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.63e-07 | 1 |
visual pigment cell | 4.76e-07 | 4 |
pigment cell | 6.13e-07 | 14 |
dark melanocyte | 6.97e-07 | 1 |