FFCP PHASE1:Hg19::chr19:1547536..1547541,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:1547536..1547541,- | |||
|id=chr19:1547536..1547541,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002573;2.17e-21;2!CL:0000054;7.49e-09;2!CL:0000137;7.49e-09;2!CL:0000092;7.49e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,2.17e-21,2;CL:0000054,8.09e-09,2;CL:0000137,8.09e-09,2;CL:0000092,8.09e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.09e-22!239;DOID:162!1.91e-20!235;DOID:3119!7.02e-16!14;DOID:0050686!3.11e-13!137;DOID:0050687!3.30e-11!143;DOID:305!3.49e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:6193;6.47e-17;1!DOID:2355;1.31e-16;1!DOID:0060085;2.25e-16;1!DOID:3165;2.25e-16;1!DOID:0060121;2.25e-16;1!DOID:2438;2.25e-16;1!DOID:4418;2.25e-16;1!DOID:3908;1.97e-13;5!DOID:3350;4.02e-09;2!DOID:3910;4.02e-09;2!DOID:74;5.71e-09;2!DOID:200;7.49e-09;2!DOID:4305;7.49e-09;2!DOID:3905;7.25e-08;9!DOID:0060058;5.34e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,7.57e-17,1;DOID:2355,1.41e-16,1;DOID:0060085,2.63e-16,1;DOID:3165,2.63e-16,1;DOID:0060121,2.63e-16,1;DOID:2438,2.63e-16,1;DOID:4418,2.63e-16,1;DOID:3908,1.85e-13,5;DOID:14566,1.33e-09,239;DOID:3910,4.02e-09,2;DOID:3350,4.34e-09,2;DOID:74,5.94e-09,2;DOID:200,8.09e-09,2;DOID:4305,8.09e-09,2;DOID:3905,7.01e-08,9;DOID:0060058,5.43e-07,10;DOID:162,9.15e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;4.02e-09;2!UBERON:0002173;4.02e-09;2!UBERON:0002186;4.02e-09;2!UBERON:0000010;9.20e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.02e-09,2;UBERON:0002173,4.02e-09,2;UBERON:0002186,4.02e-09,2;UBERON:0000010,9.20e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83081935556256,0,0,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0.269272933229316,1.62971057883012,0.31900115973192,0,0.533034776018635,0,0,0,0.676786981851542,0,0,0,0.476809736941136,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,4.64362287673365,0.0967563312890851,0,0,0,0,0,0.411125773940253,1.39100228192093,0,0,0,0,0,0.144090417154106,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945398187686684,0.412079291905832,0.674035438541849,0.0984274815147488,2.28617996577618,0,0,0.160753148465019,0,0,0,0,0,0,0,0,4.9632158164121,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0.276697269872462,0.37494122388632,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34210113519403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0.261906694481422,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0.115233987555779,0,0,0,0,1.00108261702862,0,0,3.08299379645168,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,3.0766320189947,2.64161554753389,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0.198950775161368,0,0,0,0.452888530700021,0,0,1.41095188908457,0,0,0,0,0,0,0,0,1.39917618294901,0,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0.0757786982182394,0.535928260312357,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:1547536..1547541,- | |||
}} |
Revision as of 20:17, 20 January 2014
Short description: | p@chr19:1547536..1547541, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:1547536..1547541, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 2.17e-21 | 2 |
bone matrix secreting cell | 8.09e-09 | 2 |
osteocyte | 8.09e-09 | 2 |
osteoclast | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.02e-09 | 2 |
alveolar duct | 4.02e-09 | 2 |
bronchiole | 4.02e-09 | 2 |
peripheral nervous system | 9.20e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 7.57e-17 | 1 |
anemia | 1.41e-16 | 1 |
organ system benign neoplasm | 2.63e-16 | 1 |
skin benign neoplasm | 2.63e-16 | 1 |
integumentary system benign neoplasm | 2.63e-16 | 1 |
dermis tumor | 2.63e-16 | 1 |
cutaneous fibrous histiocytoma | 2.63e-16 | 1 |
non-small cell lung carcinoma | 1.85e-13 | 5 |
disease of cellular proliferation | 1.33e-09 | 239 |
lung adenocarcinoma | 4.02e-09 | 2 |
mesenchymal cell neoplasm | 4.34e-09 | 2 |
hematopoietic system disease | 5.94e-09 | 2 |
giant cell tumor | 8.09e-09 | 2 |
bone giant cell tumor | 8.09e-09 | 2 |
lung carcinoma | 7.01e-08 | 9 |
lymphoma | 5.43e-07 | 10 |
cancer | 9.15e-07 | 235 |