FFCP PHASE1:Hg19::chr19:7797016..7797026,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339390 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24591 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UXB4,E7EQ56,B7ZKQ2,Q08G24,Q6XYD1 | |||
|association_with_transcript=30bp_to_ENST00000328853,ENST00000381308,NM_001244856,NM_198492,uc002mhp.3_5end | |||
|coexpression_cluster_id=C2505 | |||
|description=CAGE_peak_4_at_CLEC4G_5end | |||
|id=chr19:7797016..7797026,- | |||
|ontology_enrichment_celltype=CL:0000840!8.31e-10!5;CL:0001029!8.31e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0000840;5.59e-13;5!CL:0000990;5.75e-09;8!CL:0000451;1.70e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,6.50e-13,5;CL:0001029,6.50e-13,5;CL:0000990,6.36e-09,8;CL:0000451,1.84e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0008801;4.28e-19;1!UBERON:0010227;4.28e-19;1!UBERON:0006965;1.57e-10;2!UBERON:0004161;1.56e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.00e-29!115;UBERON:0002081!3.25e-13!2;UBERON:0004151!4.25e-09!3;UBERON:0000029!1.12e-07!1;UBERON:0002079!1.63e-07!1;UBERON:0001831!1.74e-07!1;UBERON:0001567!1.74e-07!1;UBERON:0008801!1.74e-07!1;UBERON:0002363!2.09e-07!1;UBERON:0007647!2.09e-07!1;UBERON:0010115!2.09e-07!1;UBERON:0002134!2.23e-07!1;UBERON:0005208!2.23e-07!1;UBERON:0005946!2.23e-07!1;UBERON:0005965!2.23e-07!1;UBERON:0002078!2.23e-07!1;UBERON:0001301!3.02e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.56e-19;1!UBERON:0002079;4.28e-19;1!UBERON:0001831;4.28e-19;1!UBERON:0001567;4.28e-19;1!UBERON:0001829;3.13e-10;2!UBERON:0002081;3.13e-10;2!UBERON:0004089;3.13e-10;2!UBERON:0002365;1.31e-09;31!UBERON:0002330;1.31e-09;31!UBERON:0002107;2.89e-09;19!UBERON:0006925;2.89e-09;19!UBERON:0004151;3.06e-07;3!UBERON:0002423;3.57e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.30e-19,1;UBERON:0002079,3.91e-19,1;UBERON:0001831,4.69e-19,1;UBERON:0001567,4.69e-19,1;UBERON:0008801,4.69e-19,1;UBERON:0002081,2.99e-10,2;UBERON:0010227,2.99e-10,2;UBERON:0001829,3.27e-10,2;UBERON:0004089,3.27e-10,2;UBERON:0002365,1.10e-09,31;UBERON:0002330,1.10e-09,31;UBERON:0002107,2.89e-09,19;UBERON:0006925,2.89e-09,19;UBERON:0008836,2.89e-09,19;UBERON:0008835,4.44e-08,22;UBERON:0003894,4.44e-08,22;UBERON:0009854,9.44e-08,23;UBERON:0004151,2.97e-07,3;UBERON:0007499,3.57e-07,25;UBERON:0009497,3.57e-07,25;UBERON:0000015,3.57e-07,25;UBERON:0002423,3.57e-07,25;UBERON:0006235,3.57e-07,25;UBERON:0004161,3.57e-07,25;UBERON:0009856,6.43e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,1.0447784237956,4.52057065764142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.45263850690247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57746442951761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442317039724898,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,4.83622371137672,2.65013777824443,0,0,0,0,0.106787412567695,0,0,4.96166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0.430333232356058,0,0,0,0,0,0,0,0,0,5.23311863336668,0 | |||
|short_description=p4@CLEC4G | |||
}} |
Revision as of 21:02, 20 January 2014
Short description: | p4@CLEC4G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CLEC4G_5end |
Coexpression cluster: | C2505_Hepatocyte_lymph_vein_liver_Dendritic_left_submaxillary |
Association with transcript: | 30bp_to_ENST00000328853, ENST00000381308, NM_001244856, NM_198492, uc002mhp.3_5end |
EntrezGene: | CLEC4G |
HGNC: | 24591 |
UniProt: | Q6UXB4E7EQ56B7ZKQ2Q08G24Q6XYD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 6.50e-13 | 5 |
common dendritic progenitor | 6.50e-13 | 5 |
conventional dendritic cell | 6.36e-09 | 8 |
dendritic cell | 1.84e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.30e-19 | 1 |
left cardiac atrium | 3.91e-19 | 1 |
parotid gland | 4.69e-19 | 1 |
cheek | 4.69e-19 | 1 |
parotid gland primordium | 4.69e-19 | 1 |
cardiac atrium | 2.99e-10 | 2 |
future cardiac atrium | 2.99e-10 | 2 |
major salivary gland | 3.27e-10 | 2 |
midface | 3.27e-10 | 2 |
exocrine gland | 1.10e-09 | 31 |
exocrine system | 1.10e-09 | 31 |
liver | 2.89e-09 | 19 |
digestive gland | 2.89e-09 | 19 |
liver bud | 2.89e-09 | 19 |
hepatic diverticulum | 4.44e-08 | 22 |
liver primordium | 4.44e-08 | 22 |
digestive tract diverticulum | 9.44e-08 | 23 |
cardiac chamber | 2.97e-07 | 3 |
epithelial sac | 3.57e-07 | 25 |
epithelium of foregut-midgut junction | 3.57e-07 | 25 |
anatomical boundary | 3.57e-07 | 25 |
hepatobiliary system | 3.57e-07 | 25 |
foregut-midgut junction | 3.57e-07 | 25 |
septum transversum | 3.57e-07 | 25 |
sac | 6.43e-07 | 26 |