FFCP PHASE1:Hg19::chr19:42400771..42400789,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9138 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=681 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-303bp_to_uc002osd.2_5end | |||
|description=CAGE_peak_17_at_ARHGEF1_5end | |||
|id=chr19:42400771..42400789,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.20e-07!172;CL:0000566!2.20e-07!172;CL:0000542!2.49e-07!53;CL:0000051!2.49e-07!53;CL:0002032!3.98e-07!165;CL:0000837!3.98e-07!165;CL:0000838!6.92e-07!52;CL:0000988!8.34e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000624;5.29e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.70e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.15e-11!115;UBERON:0001049!1.33e-10!57;UBERON:0005068!1.33e-10!57;UBERON:0006241!1.33e-10!57;UBERON:0007135!1.33e-10!57;UBERON:0002346!1.17e-09!90;UBERON:0003080!7.06e-09!42;UBERON:0002780!2.29e-08!41;UBERON:0001890!2.29e-08!41;UBERON:0006240!2.29e-08!41;UBERON:0003075!3.35e-08!86;UBERON:0007284!3.35e-08!86;UBERON:0002616!5.09e-08!59;UBERON:0005743!1.04e-07!86;UBERON:0001017!1.06e-07!82;UBERON:0000955!1.30e-07!69;UBERON:0006238!1.30e-07!69;UBERON:0003056!4.21e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.82e-11;15!UBERON:0000179;1.82e-11;15!UBERON:0000463;1.82e-11;15!UBERON:0001894;7.59e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.33e-11,15;UBERON:0000179,1.33e-11,15;UBERON:0000463,1.33e-11,15;UBERON:0007023,1.60e-07,114;UBERON:0001894,7.01e-07,7;UBERON:0006222,7.01e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.458480434487708,0.328402357799783,0.393553906568396,0,0.383829398097213,0,0,0,0,0.154934401160603,0.142169232487422,0,0.553995408531877,0.401088894940283,1.08505435357926,0,0.647787332037959,0.257575567634187,0.726991193897824,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0.564727018627814,0.272906150057846,0,0,0,0,0.329851300186716,0.398927315243264,0,0,0,0,0.502497330513487,0.521482918420201,0,0.605399502633369,0,0,0,0.212604299965044,0,0.22465726229299,0.150176892841506,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,1.1384259382189,0,0.764546456250458,0,0,0,1.180258620683,3.14408610199332,1.85041349099558,0.501559486172034,0.32592226663359,0.946895611469467,0,0.111410456885174,0,0.443067789167242,0.541607727530031,2.17755243533648,2.21100890851793,5.75532666112866,2.76350017785848,0.869409257205157,0.296573126324121,0,0,0.453237370790265,0.383220493601921,0,0.759059076058509,0.637130828648193,0,0,0,0.383959833463255,0,0.473554504088034,0,0,2.13952156626806,1.44824403882799,0,0,0,0.722878304769133,0,0.289693037921647,0,0,0.0945348171640679,0,0.527008714158756,0,0,0,0,0.174129737299267,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.573673241497627,0.354668382198357,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,1.07633781413317,0,0,0,0.206105058476878,1.28820270022815,0,0.337552664482532,0,0.252433774244115,0,0.161646056818812,0.710019185033229,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0.088048434013226,0.414656231081544,0.144119953416961,0,0.190493682876507,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,2.29723871668228,0,0,0.205476322550383,0,0.112085143993527,0.788123040807709,2.15627574859517,0.641715181398742,0,0,0,0.167516265334349,1.27587750330633,1.49801404789436,0,0,0,0,0,2.70362119990049,0.713715955188647,0.946214490203608,0.35142424497814,0,0,0,0,0,0.173767228936166,0,0,0.82707210449155,0.647142602455851,0.853820462427555,0,0,0,0,0.460385919864187,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.255225424989168,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0,0,0,0,0,2.53723804616085,0,3.98753031021914,1.19115887728894,0.822724546172388,0,1.62009431171434,1.58625035258854,0,0,0,0.743212700502875,0.28853842595289,0.782560276832555,0.478278818186467,0.798317485731266,0,0.423347165447766,0,0.280797178113459,0.228234679033192,0.313359791546046,0,0,0.321176150207399,0,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0.19924798825107,0.552567831062295,0.251932747854276,0,0.123084805461069,0,0,0.179021174675609,1.02314474045374,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.227586896570999,0,0,0,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0.591095237907095,0,0,0,0.153900517007594,0,0,0.0897576444097721,0.651884231532048,0,0,0,0,0,0.332423363800313,0.225595660617181,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0.202203398942031,0.802577647298789,0.234264445725339,0.364909578431332,0,0,1.18375320854817,3.62972148145992,0.30607276163049,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0.343972064943233,0.19351266257817,0,0.0821154570532092,0,0,0.451961481561065,0.137041924646751,0,0.189932387867636,0,0,0,0,0.144090417154106,0,0.514784993585894,0,0,0.235694034616795,0.135904206073614,0.418411385249333,0,0.288950589901519,0,0.273810757783986,0,0,0.262887354279314,0.279282401272254,1.14580212005842,0,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0.423366660328922,1.59045937961861,0.272406812223151,0,0,0.415440338029185,0,0.77380195455795,0.121499113316049,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0.328370082997356,0.170388021785422,0.226624183040251,0,0,0.904980694530854,1.05786081394152,0,0,0,0.157204305099666,1.65695622138878,0.496166021811951,0.197611631897944,0.12179259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| |||
|short_description=p17@ARHGEF1 | |||
}} |
Revision as of 23:32, 20 January 2014
Short description: | p17@ARHGEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_ARHGEF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -303bp_to_uc002osd.2_5end |
EntrezGene: | ARHGEF1 |
HGNC: | 681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.70e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 1.33e-11 | 15 |
haemolymphatic fluid | 1.33e-11 | 15 |
organism substance | 1.33e-11 | 15 |
adult organism | 1.60e-07 | 114 |
diencephalon | 7.01e-07 | 7 |
future diencephalon | 7.01e-07 | 7 |