FFCP PHASE1:Hg19::chr2:29220340..29220349,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C695 | |||
|description=CAGE_peak_at_chr2:29220340..29220349,+ | |||
|id=chr2:29220340..29220349,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;4.27e-34;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,4.27e-34,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.96e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.40e-45!57;UBERON:0005068!7.40e-45!57;UBERON:0006241!7.40e-45!57;UBERON:0007135!7.40e-45!57;UBERON:0002616!1.37e-35!59;UBERON:0007023!3.76e-33!115;UBERON:0003076!3.81e-33!15;UBERON:0003057!3.81e-33!15;UBERON:0005743!5.19e-33!86;UBERON:0000955!3.23e-32!69;UBERON:0006238!3.23e-32!69;UBERON:0001017!5.36e-32!82;UBERON:0003075!9.74e-31!86;UBERON:0007284!9.74e-31!86;UBERON:0000073!2.06e-29!94;UBERON:0001016!2.06e-29!94;UBERON:0002346!3.85e-29!90;UBERON:0002308!1.20e-26!9;UBERON:0000125!1.20e-26!9;UBERON:0004733!1.22e-26!12;UBERON:0002028!1.22e-26!12;UBERON:0007277!1.22e-26!12;UBERON:0004732!1.70e-24!13;UBERON:0002298!1.47e-22!8;UBERON:0002020!3.71e-21!34;UBERON:0003528!3.71e-21!34;UBERON:0002680!2.05e-20!9;UBERON:0001895!2.05e-20!9;UBERON:0010092!2.05e-20!9;UBERON:0002780!5.08e-20!41;UBERON:0001890!5.08e-20!41;UBERON:0006240!5.08e-20!41;UBERON:0002420!8.64e-20!9;UBERON:0007245!8.64e-20!9;UBERON:0010009!8.64e-20!9;UBERON:0010011!8.64e-20!9;UBERON:0000454!8.64e-20!9;UBERON:0003080!1.74e-19!42;UBERON:0002791!1.98e-18!33;UBERON:0009663!5.63e-18!7;UBERON:0001893!7.81e-18!34;UBERON:0000033!9.61e-18!123;UBERON:0000153!1.09e-16!129;UBERON:0007811!1.09e-16!129;UBERON:0006331!6.30e-16!3;UBERON:0000988!1.05e-15!3;UBERON:0003056!1.22e-14!61;UBERON:0004121!4.38e-14!169;UBERON:0000924!1.23e-13!173;UBERON:0006601!1.23e-13!173;UBERON:0001869!4.56e-13!32;UBERON:0000369!9.51e-12!4;UBERON:0002435!9.51e-12!4;UBERON:0000204!9.51e-12!4;UBERON:0010082!9.51e-12!4;UBERON:0001873!3.33e-11!2;UBERON:0010122!3.33e-11!2;UBERON:0002148!5.00e-11!2;UBERON:0009662!5.00e-11!2;UBERON:0000025!1.21e-10!194;UBERON:0000349!2.57e-09!5;UBERON:0002037!1.03e-08!6;UBERON:0006215!1.03e-08!6;UBERON:0000477!1.42e-08!286;UBERON:0004111!2.20e-08!241;UBERON:0000475!3.52e-08!365;UBERON:0002240!3.78e-08!3;UBERON:0000064!6.37e-08!219;UBERON:0002106!6.80e-08!3;UBERON:0001896!6.80e-08!3;UBERON:0004854!6.80e-08!3;UBERON:0009034!6.80e-08!3;UBERON:0002095!6.80e-08!3;UBERON:0004782!6.80e-08!3;UBERON:0003281!6.80e-08!3;UBERON:0005290!6.80e-08!3;UBERON:0009664!6.80e-08!3;UBERON:0002296!6.80e-08!3;UBERON:0005602!6.80e-08!3;UBERON:0001179!6.80e-08!3;UBERON:0006293!6.80e-08!3;UBERON:0010096!6.80e-08!3;UBERON:0005383!9.55e-08!3;UBERON:0005382!9.55e-08!3;UBERON:0000483!2.00e-07!309;UBERON:0000119!2.69e-07!312;UBERON:0002619!4.44e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;4.21e-21;5!UBERON:0010039;4.21e-21;5!UBERON:0002037;9.07e-18;6!UBERON:0002680;2.45e-12;9!UBERON:0001895;2.45e-12;9!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13!UBERON:0001041;1.86e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.07e-18,6;UBERON:0006215,9.07e-18,6;UBERON:0000945,9.39e-14,8;UBERON:0010039,9.39e-14,8;UBERON:0002680,2.45e-12,9;UBERON:0001895,2.45e-12,9;UBERON:0010092,2.45e-12,9;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,1.52581736317083,0.884634079449797,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,4.99524023955326,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.443716206147409,0.310482014706917,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.271878931907327,0,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0.588925401344836,0.594092800654172,0,0,0.281951753939561,0.45120521581504,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:29220340..29220349,+ | |||
}} |
Revision as of 02:23, 21 January 2014
Short description: | p@chr2:29220340..29220349, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:29220340..29220349, + |
Coexpression cluster: | C695_gastric_mesothelioma_amniotic_chorionic_Mast_tongue_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 4.27e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.07e-18 | 6 |
rhombic lip | 9.07e-18 | 6 |
stomach | 9.39e-14 | 8 |
food storage organ | 9.39e-14 | 8 |
regional part of metencephalon | 2.45e-12 | 9 |
metencephalon | 2.45e-12 | 9 |
future metencephalon | 2.45e-12 | 9 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.86e-08 | 14 |