FFCP PHASE1:Hg19::chr2:40679560..40679574,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6546 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11068 | |||
|TSSclassifier=weak | |||
|UniProt=P32418 | |||
|association_with_transcript=-351bp_to_ENST00000406785,uc002rsa.2,uc010fan.1_5end | |||
|description=CAGE_peak_5_at_SLC8A1_5end | |||
|id=chr2:40679560..40679574,- | |||
|ontology_enrichment_celltype=CL:0002057!5.02e-26!42;CL:0002009!1.67e-23!65;CL:0000860!8.64e-23!45;CL:0002194!3.46e-22!63;CL:0000576!3.46e-22!63;CL:0000040!3.46e-22!63;CL:0000559!3.46e-22!63;CL:0000766!8.07e-21!76;CL:0000557!2.66e-19!71;CL:0000839!1.75e-17!70;CL:0000763!6.27e-09!112;CL:0000049!6.27e-09!112;CL:0002393!4.23e-08!9;CL:0002397!4.23e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.64e-31;33!CL:0002057;8.64e-31;33!CL:0000576;1.97e-27;48!CL:0000473;2.41e-24;39!CL:0000234;2.41e-24;39!CL:0000766;3.69e-17;69!CL:0002393;2.19e-10;6!CL:0002397;2.19e-10;6!CL:0000763;3.69e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.42e-48,42;CL:0002057,8.42e-48,42;CL:0000473,1.13e-44,48;CL:0000234,1.13e-44,48;CL:0002009,3.66e-39,61;CL:0000766,1.18e-36,72;CL:0002194,1.61e-36,59;CL:0000576,1.61e-36,59;CL:0000040,1.61e-36,59;CL:0000559,1.61e-36,59;CL:0000557,2.12e-34,67;CL:0000839,3.10e-31,66;CL:0000763,4.99e-22,108;CL:0000049,4.99e-22,108;CL:0000738,3.83e-17,136;CL:0002087,3.46e-15,115;CL:0002393,3.50e-15,9;CL:0002397,3.50e-15,9;CL:0002031,2.32e-13,120;CL:0000134,4.21e-12,354;CL:0002320,1.96e-11,361;CL:0000037,3.77e-11,168;CL:0000988,1.85e-10,177;CL:0002032,3.17e-10,161;CL:0000837,3.17e-10,161;CL:0000219,5.17e-10,386;CL:0000048,1.22e-07,427;CL:0000723,3.03e-07,433;CL:0000034,3.57e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.32e-33;42!CL:0000049;6.59e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.64e-17!86;UBERON:0002371!3.56e-17!80;UBERON:0002390!8.08e-17!102;UBERON:0003061!8.08e-17!102;UBERON:0004765!5.02e-16!101;UBERON:0001434!5.02e-16!101;UBERON:0002780!9.60e-16!41;UBERON:0001890!9.60e-16!41;UBERON:0006240!9.60e-16!41;UBERON:0003080!5.61e-15!42;UBERON:0001049!2.97e-14!57;UBERON:0005068!2.97e-14!57;UBERON:0006241!2.97e-14!57;UBERON:0007135!2.97e-14!57;UBERON:0002193!8.03e-14!112;UBERON:0007023!1.22e-13!115;UBERON:0001017!1.69e-13!82;UBERON:0001869!3.98e-13!32;UBERON:0002020!4.41e-13!34;UBERON:0003528!4.41e-13!34;UBERON:0001893!4.41e-13!34;UBERON:0002791!1.02e-12!33;UBERON:0000955!1.11e-12!69;UBERON:0006238!1.11e-12!69;UBERON:0002616!2.74e-12!59;UBERON:0005743!2.78e-12!86;UBERON:0000956!1.47e-11!25;UBERON:0000203!1.47e-11!25;UBERON:0002619!3.40e-11!22;UBERON:0000467!6.41e-11!625;UBERON:0000062!6.53e-11!511;UBERON:0000073!7.26e-11!94;UBERON:0001016!7.26e-11!94;UBERON:0000480!9.23e-11!626;UBERON:0002204!2.00e-10!167;UBERON:0000468!2.22e-10!659;UBERON:0001950!2.73e-10!20;UBERON:0003056!1.03e-09!61;UBERON:0002405!2.05e-09!115;UBERON:0003075!3.91e-09!86;UBERON:0007284!3.91e-09!86;UBERON:0000479!5.20e-09!787;UBERON:0000153!5.28e-08!129;UBERON:0007811!5.28e-08!129;UBERON:0000033!6.23e-08!123;UBERON:0002346!6.44e-08!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.27e-09;22!UBERON:0002791;5.06e-09;32!UBERON:0000956;5.25e-09;25!UBERON:0000203;5.25e-09;25!UBERON:0001869;5.45e-09;32!UBERON:0001950;6.42e-09;20!UBERON:0003528;2.57e-08;34!UBERON:0002020;2.57e-08;34!UBERON:0001893;4.16e-08;34!UBERON:0002780;1.63e-07;41!UBERON:0001890;1.63e-07;41!UBERON:0003688;6.67e-07;6!UBERON:0002358;6.67e-07;6!UBERON:0003684;6.67e-07;6!UBERON:0001178;6.67e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.63e-30,76;UBERON:0001474,1.10e-29,82;UBERON:0002390,2.82e-29,98;UBERON:0003061,2.82e-29,98;UBERON:0004765,9.39e-26,90;UBERON:0002193,4.32e-25,108;UBERON:0002405,1.26e-24,93;UBERON:0001434,6.29e-23,100;UBERON:0003081,1.73e-11,203;UBERON:0002384,4.82e-11,371;UBERON:0002204,7.65e-11,167;UBERON:0002780,3.03e-10,41;UBERON:0001890,3.03e-10,41;UBERON:0003080,3.03e-10,41;UBERON:0006240,3.03e-10,41;UBERON:0002791,3.53e-10,32;UBERON:0001869,3.53e-10,32;UBERON:0002619,1.26e-09,22;UBERON:0000956,2.27e-09,25;UBERON:0000203,2.27e-09,25;UBERON:0003528,2.51e-09,34;UBERON:0002020,2.51e-09,34;UBERON:0001893,2.51e-09,34;UBERON:0001950,2.62e-09,20;UBERON:0000073,1.35e-07,53;UBERON:0002616,1.35e-07,53;UBERON:0001049,6.46e-07,56;UBERON:0005068,6.46e-07,56;UBERON:0006241,6.46e-07,56;UBERON:0007135,6.46e-07,56;UBERON:0003688,8.82e-07,6;UBERON:0002358,8.82e-07,6;UBERON:0003684,8.82e-07,6;UBERON:0001178,8.82e-07,6 | |||
|phase1_expression=3.45188920614058,3.21150785836475,2.39622486963151,5.00366491765652,0.893922188854576,2.61701557230111,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,1.38096903554283,0,0,0,0.786728553697808,2.30297638858328,1.85779347979291,0.919421224478927,0,0,0,0,0,1.66198622559563,3.81034450193269,4.34021741431704,0.223915474239924,0.32389366601898,1.03030227053675,1.59938062657521,0,1.94067248950253,2.32429036905685,0.411167888021826,1.54853185447552,4.02769349251011,3.58624989140741,3.31075121844019,1.72372840368309,2.5819387343353,2.70852973188684,1.12945403725563,1.09162460023138,1.79778787556068,3.06083892370903,0.641858054152187,3.19668562899521,5.93732340336089,7.57961898962201,8.95071976118658,0.870627715885752,1.70215567407342,3.11411124497787,1.50749199154046,4.17186334736161,3.9093992046921,1.21079900526674,1.10483290796269,2.84816148696796,2.5350634357433,5.74031609905618,3.77385561915077,2.2465726229299,1.95229960693958,3.2145117339416,3.42015292489498,2.98375015798635,3.47061892152804,0,0,0,0,0,0,0,0,0,0,0,0,2.80254281490768,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,1.01392563272577,0,0,0.756278537312543,0.443458794925128,0.263504357079378,0.589405839739707,0,0,0.97364218096405,0.696518949197069,0,0.238490624305342,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,1.14734648299525,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.704606991862589,1.61872944368132,1.26405726032024,0.204154171254893,0.61417158655884,0.103325781175765,1.18800285728205,1.23633464639278,0,0,0.168336113954066,0.625592599359821,0,0.877955241761676,0.30648779579902,0.901428353439581,0.340296549480063,3.40840307808838,0.213557388818567,0.635795703478686,2.10063767259082,0.824420233907511,5.66809188100384,2.04728541964749,2.86919764810153,0.876933046450788,2.77677151668526,0.828449087780694,0.646584227275248,7.4552014428489,1.91428986632517,0.847802961552438,0,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.695582429850461,0.117408694235822,0,0,0,0,0,0.738651018262192,1.17002132569619,1.78357394746474,0,0,0,0.268675568108545,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.1466765716419,0,0,0.845302752556,0.531876233169741,1.04007436911366,0,1.41849132023278,0.532844358032199,0,0,0,0.65147236858747,0,0,0,0,0,0,0.502257091432126,0,1.19812427745791,0,0,0.289562613335158,0.205476322550383,0.895304816199478,0,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,0,0.773288812777695,0.502548796003046,0,2.99602809578873,5.9832291840805,2.48649308061621,0,0,0,1.66376689224646,0.356857977594324,0.157702415033935,0.35142424497814,0.601892199455438,0,1.03473071292505,2.65690239414175,1.29058417979192,0.434418072340414,0,0,1.24060815673732,1.72571360654893,2.24127871387233,0,0,0,1.73675465473144,3.22270143904931,3.36792113319688,2.30650468660262,1.53512174720011,2.0911009748669,0,1.07946785661859,0.532685175939381,0.657017248110473,0.519254429183621,0.348631135379878,0,0.40101294060657,0,0.229628896329213,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,1.29549549661284,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0,0.515205058238611,1.55668090191184,1.07262349896764,0,0,0,0.386682873168488,0.154048617114644,0.307007349452259,1.10269257987624,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0,0,0,0,0,2.83331112147576,0,0.308033580176089,0,0,0.18532421910392,0.572499546967965,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.731140468893853,2.11300293513511,0.409499734223957,0,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.491245205065606,0.35667105148125,0.354761064070598,0.633322905892992,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,4.5571774973933,0.714695326373367,0.411362273086194,1.29694662238543,0.540031437238115,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,1.53620382154229,0.671028323677248,0.667396566847634,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,1.9882952955326,0.984685914873589,0.111308705022906,0,0,1.39473591775749,0,0,0,0,0.622079175323615,0,0,0,0.394573622547734,0,0,0.969332746095218,0.649376687132959,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,1.77148277162768,1.80894657938112,1.52581736317083,0.110579259931225,0,2.4132393686937,0,0,0.307801034015188,0,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,2.12202650606892,0,0,1.99052386215701,0.265372693510018,0,0,0,0,0.269604531922708,0,0.702793337176017,0,0,0,0,0,2.44858209304392,0.695052375913368,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0.397429223405979,0.886351143382302,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0.124252535565433,0,1.22313785466253,0.732219924186332,0,0,0,0.410716136675979,0,0,0,1.39641200636127,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0.295282444544246,0,1.59045937961861,0.953423842781029,0,0.137539436597234,0.83088067605837,2.4747128070665,3.0952078182318,0.668245123238271,0,0.0788057072991982,0.83927341015997,0,0.179287339332845,0.575745591958336,0,0,0,0.542999601753713,0,0.653174720218818,0,0.082092520749339,1.70388021785422,0.113312091520126,0.293104467356165,0,0.646414781807753,0.39669780522807,0,0,0.640724475406168,0.314408610199332,2.48543433208317,0.496166021811951,0,0,0,0,0.7520696820681,0,0.655745261419609,0.628216385000937,1.77213635993397,1.95242023843141,0.751145584238999,0.573409195690071,0.221858103073705,0.434674820589684,0.968440444553616,0,0,0,0,0,0.579684114443301,0.149254802886874,0,0,0.378806010550178,0,0,0,0,0.466311601748341,0.443565449968902,0.477890301491107,0,0.310525913752519,1.24411862352257,1.06336685823198,0,0.300515217994437,0.380805212168795,0.406870733204662,0,0.751873899297419,0.464033759878494,0.398095888698616,1.20008329398946,0,0.673498977531838,0,0,0,0,0,0,0.489473409012935,0.537266523244462,0,0,0.883445729729405,0,0,0,0,0,1.7973596699725,0,0,0,0.327609848846413,0.245772908753719,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0.539124056983409,0,0.436838552768056,0,0,0,0,0,0,0.80057074828547,0.705351887381368,1.531227386766,0.642292250964595,1.41696576325585,1.43670473151436,1.23069818544453,3.52900374710405,0.899044282034833,1.61475645631851,0,0,0,0,0,0,0,0.198916222116275,0.451261970095544,0.20170506870352,0,0,0,0,0.87798860003913,0.781078098613847,1.2401207790071,0.887821342714695,7.11067251723685,0.548257766857182,0.992422356778588,0,0.127762427639595,2.67850917939143,2.01770233331294,0.606965604236632,1.36597314810779,0.177404740325278,0,0.171488009437418,0.679697329768317,1.77586488619693,0,0,0.39246546425257,2.35673384874003,0,0,0,0,0.214429632529969,0.47404083519818,0.464965701472501,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0.955538938977433,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0.237840181555137,0,0.659643100472575,0.150962843566674,0.540219106755613,0.437119121007915,0,0.735444965261716,0,0.392616934229891,0.297046400327086,0.8453114551668,2.88876094969289,1.97366227757693,1.48253142339228,0,0,0,0,0,0,0.286679166302903,0,1.56380427439104,3.05445483238264,0,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0.0918948995348449,0,0.303114792872958,0,0.829169439458779,0.413731983447581,0.426467963801962,0.23806443146374,0.775066918032073,0.372448285775147,0,0.0636471582781649,0.202117188958219,0.217716747896961,0.342233301085281,0.26940821205835,0.502055437748735,0.332660356546013,0.0814032686109745,0,0,0,0,0.977931553462932,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p5@SLC8A1 | |||
}} |
Revision as of 02:45, 21 January 2014
Short description: | p5@SLC8A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC8A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -351bp_to_ENST00000406785, uc002rsa.2, uc010fan.1_5end |
EntrezGene: | SLC8A1 |
HGNC: | 11068 |
UniProt: | P32418 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.42e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.42e-48 | 42 |
defensive cell | 1.13e-44 | 48 |
phagocyte | 1.13e-44 | 48 |
macrophage dendritic cell progenitor | 3.66e-39 | 61 |
myeloid leukocyte | 1.18e-36 | 72 |
monopoietic cell | 1.61e-36 | 59 |
monocyte | 1.61e-36 | 59 |
monoblast | 1.61e-36 | 59 |
promonocyte | 1.61e-36 | 59 |
granulocyte monocyte progenitor cell | 2.12e-34 | 67 |
myeloid lineage restricted progenitor cell | 3.10e-31 | 66 |
myeloid cell | 4.99e-22 | 108 |
common myeloid progenitor | 4.99e-22 | 108 |
leukocyte | 3.83e-17 | 136 |
nongranular leukocyte | 3.46e-15 | 115 |
intermediate monocyte | 3.50e-15 | 9 |
CD14-positive, CD16-positive monocyte | 3.50e-15 | 9 |
hematopoietic lineage restricted progenitor cell | 2.32e-13 | 120 |
mesenchymal cell | 4.21e-12 | 354 |
connective tissue cell | 1.96e-11 | 361 |
hematopoietic stem cell | 3.77e-11 | 168 |
hematopoietic cell | 1.85e-10 | 177 |
hematopoietic oligopotent progenitor cell | 3.17e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.17e-10 | 161 |
motile cell | 5.17e-10 | 386 |
multi fate stem cell | 1.22e-07 | 427 |
somatic stem cell | 3.03e-07 | 433 |
stem cell | 3.57e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.63e-30 | 76 |
bone element | 1.10e-29 | 82 |
hematopoietic system | 2.82e-29 | 98 |
blood island | 2.82e-29 | 98 |
skeletal element | 9.39e-26 | 90 |
hemolymphoid system | 4.32e-25 | 108 |
immune system | 1.26e-24 | 93 |
skeletal system | 6.29e-23 | 100 |
lateral plate mesoderm | 1.73e-11 | 203 |
connective tissue | 4.82e-11 | 371 |
musculoskeletal system | 7.65e-11 | 167 |
regional part of forebrain | 3.03e-10 | 41 |
forebrain | 3.03e-10 | 41 |
anterior neural tube | 3.03e-10 | 41 |
future forebrain | 3.03e-10 | 41 |
regional part of telencephalon | 3.53e-10 | 32 |
cerebral hemisphere | 3.53e-10 | 32 |
regional part of cerebral cortex | 1.26e-09 | 22 |
cerebral cortex | 2.27e-09 | 25 |
pallium | 2.27e-09 | 25 |
brain grey matter | 2.51e-09 | 34 |
gray matter | 2.51e-09 | 34 |
telencephalon | 2.51e-09 | 34 |
neocortex | 2.62e-09 | 20 |
regional part of nervous system | 1.35e-07 | 53 |
regional part of brain | 1.35e-07 | 53 |
neural tube | 6.46e-07 | 56 |
neural rod | 6.46e-07 | 56 |
future spinal cord | 6.46e-07 | 56 |
neural keel | 6.46e-07 | 56 |
omentum | 8.82e-07 | 6 |
peritoneum | 8.82e-07 | 6 |
abdominal cavity | 8.82e-07 | 6 |
visceral peritoneum | 8.82e-07 | 6 |