FFCP PHASE1:Hg19::chr2:50149221..50149234,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=9378 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8008 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-240bp_to_AF087975_5end | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_29_at_NRXN1_5end | |||
|id=chr2:50149221..50149234,- | |||
|ontology_enrichment_celltype=CL:0000242!1.65e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.34e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.17e-52!57;UBERON:0005068!1.17e-52!57;UBERON:0006241!1.17e-52!57;UBERON:0007135!1.17e-52!57;UBERON:0001017!8.92e-47!82;UBERON:0005743!3.25e-44!86;UBERON:0002616!4.98e-44!59;UBERON:0001893!2.31e-42!34;UBERON:0000073!1.26e-41!94;UBERON:0001016!1.26e-41!94;UBERON:0000955!1.76e-41!69;UBERON:0006238!1.76e-41!69;UBERON:0002780!3.45e-41!41;UBERON:0001890!3.45e-41!41;UBERON:0006240!3.45e-41!41;UBERON:0003080!4.45e-40!42;UBERON:0002791!6.61e-40!33;UBERON:0002020!8.74e-39!34;UBERON:0003528!8.74e-39!34;UBERON:0001869!1.57e-37!32;UBERON:0007023!2.43e-37!115;UBERON:0003075!6.77e-37!86;UBERON:0007284!6.77e-37!86;UBERON:0002619!1.15e-35!22;UBERON:0002346!6.96e-35!90;UBERON:0001950!1.83e-34!20;UBERON:0000956!4.63e-31!25;UBERON:0000203!4.63e-31!25;UBERON:0003056!3.67e-28!61;UBERON:0004121!5.88e-22!169;UBERON:0000033!1.54e-21!123;UBERON:0000924!3.12e-21!173;UBERON:0006601!3.12e-21!173;UBERON:0000153!3.63e-20!129;UBERON:0007811!3.63e-20!129;UBERON:0000200!1.51e-14!6;UBERON:0003076!2.83e-13!15;UBERON:0003057!2.83e-13!15;UBERON:0002771!5.35e-12!3;UBERON:0002021!7.53e-12!5;UBERON:0000025!9.22e-12!194;UBERON:0001872!2.48e-11!5;UBERON:0001871!2.61e-11!7;UBERON:0002298!4.50e-10!8;UBERON:0004733!9.79e-10!12;UBERON:0002028!9.79e-10!12;UBERON:0007277!9.79e-10!12;UBERON:0002420!1.96e-09!9;UBERON:0007245!1.96e-09!9;UBERON:0010009!1.96e-09!9;UBERON:0010011!1.96e-09!9;UBERON:0000454!1.96e-09!9;UBERON:0002308!3.47e-09!9;UBERON:0000125!3.47e-09!9;UBERON:0004732!6.23e-09!13;UBERON:0000064!1.17e-08!219;UBERON:0004111!1.18e-08!241;UBERON:0000369!1.85e-08!4;UBERON:0002435!1.85e-08!4;UBERON:0000204!1.85e-08!4;UBERON:0010082!1.85e-08!4;UBERON:0009663!6.09e-08!7;UBERON:0000483!6.96e-08!309;UBERON:0000119!1.01e-07!312;UBERON:0000477!2.80e-07!286;UBERON:0000349!5.74e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.10e-59;20!UBERON:0002619;1.70e-54;22!UBERON:0000956;3.32e-48;25!UBERON:0000203;3.32e-48;25!UBERON:0002771;8.95e-41;2!UBERON:0001893;1.89e-33;34!UBERON:0002791;2.44e-32;32!UBERON:0001869;4.52e-32;32!UBERON:0003528;6.21e-31;34!UBERON:0002020;6.21e-31;34!UBERON:0000200;1.86e-30;6!UBERON:0001871;3.16e-26;6!UBERON:0000073;5.64e-22;53!UBERON:0002616;5.64e-22;53!UBERON:0002780;1.49e-19;41!UBERON:0001890;1.49e-19;41!UBERON:0001872;8.13e-17;5!UBERON:0002021;8.13e-17;5!UBERON:0001017;3.12e-15;75!UBERON:0000955;2.54e-11;68!UBERON:0001876;3.02e-11;2!UBERON:0002702;3.02e-11;2!UBERON:0001016;6.67e-09;83!UBERON:0001896;6.34e-08;3!UBERON:0001870;6.34e-08;3!UBERON:0005290;6.34e-08;3!UBERON:0004733;1.47e-07;12!UBERON:0002028;1.47e-07;12!UBERON:0004732;4.80e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,8.12e-60,20;UBERON:0002619,1.29e-54,22;UBERON:0000956,2.60e-48,25;UBERON:0000203,2.60e-48,25;UBERON:0002771,1.34e-40,2;UBERON:0002791,4.75e-38,32;UBERON:0001869,4.75e-38,32;UBERON:0000073,3.89e-36,53;UBERON:0002616,3.89e-36,53;UBERON:0003528,7.19e-36,34;UBERON:0002020,7.19e-36,34;UBERON:0001893,7.19e-36,34;UBERON:0001049,3.18e-34,56;UBERON:0005068,3.18e-34,56;UBERON:0006241,3.18e-34,56;UBERON:0007135,3.18e-34,56;UBERON:0000200,1.69e-30,6;UBERON:0002780,7.18e-30,41;UBERON:0001890,7.18e-30,41;UBERON:0003080,7.18e-30,41;UBERON:0006240,7.18e-30,41;UBERON:0000955,7.98e-28,68;UBERON:0006238,7.98e-28,68;UBERON:0001871,3.76e-26,6;UBERON:0001017,2.01e-23,81;UBERON:0003075,2.01e-23,82;UBERON:0007284,2.01e-23,82;UBERON:0002346,2.49e-22,86;UBERON:0001016,4.23e-21,89;UBERON:0003056,3.59e-20,61;UBERON:0010371,1.91e-18,104;UBERON:0002021,6.40e-17,5;UBERON:0001872,8.14e-17,5;UBERON:0010314,1.77e-14,132;UBERON:0002702,2.23e-11,2;UBERON:0001876,3.02e-11,2;UBERON:0004121,5.90e-11,171;UBERON:0000924,5.90e-11,171;UBERON:0006601,5.90e-11,171;UBERON:0007023,8.34e-11,114;UBERON:0000025,7.96e-10,192;UBERON:0011216,2.87e-08,223;UBERON:0001870,5.18e-08,3;UBERON:0001896,6.78e-08,3;UBERON:0005290,6.78e-08,3;UBERON:0010096,6.78e-08,3;UBERON:0004111,9.40e-08,240;UBERON:0004733,1.67e-07,12;UBERON:0002028,1.67e-07,12;UBERON:0007277,1.67e-07,12;UBERON:0004732,5.42e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,1.26602474769461,0,0,0.422250816255987,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,1.10579259931225,0.886642856860642,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.15196986764724,1.502291168478,1.14681839138014,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.385375350578757,1.41696576325585,1.27707087245721,0.615349092722265,0.504143392443436,0,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,1.65349437200947,0.19024743058172,1.09394961803644,0,0,0,0,0,0.672567444437648,0,0,0,0,0,0.271878931907327,0.197318320688547,0,0,0,0.942693539496011,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.994753875806841,0,0,0,0.754814217833368,0,0.218559560503957,0,0.490296643507811,0.471353094203252,0.196308467114945,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p29@NRXN1 | |||
}} |
Revision as of 03:04, 21 January 2014
Short description: | p29@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_29_at_NRXN1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -240bp_to_AF087975_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data