FFCP PHASE1:Hg19::chr2:167350691..167350705,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10594 | |||
|TSSclassifier=strong | |||
|UniProt=C9JII9 | |||
|association_with_transcript=9bp_to_ENST00000441411_5end | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_5_at_SCN7A_5end | |||
|id=chr2:167350691..167350705,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.23e-11;4!UBERON:0007284;5.23e-11;4!UBERON:0006603;1.45e-10;65!UBERON:0007297;1.98e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.31e-70!115;UBERON:0003103!1.24e-13!69;UBERON:0000481!6.75e-12!347;UBERON:0007100!2.06e-11!27;UBERON:0003075!5.19e-10!86;UBERON:0007284!5.19e-10!86;UBERON:0002298!8.73e-10!8;UBERON:0000062!9.80e-10!511;UBERON:0001049!2.01e-09!57;UBERON:0005068!2.01e-09!57;UBERON:0006241!2.01e-09!57;UBERON:0007135!2.01e-09!57;UBERON:0002346!3.00e-09!90;UBERON:0003076!3.91e-08!15;UBERON:0003057!3.91e-08!15;UBERON:0000468!5.73e-08!659;UBERON:0000477!6.16e-08!286;UBERON:0000948!7.64e-08!24;UBERON:0005498!7.64e-08!24;UBERON:0004140!7.64e-08!24;UBERON:0009881!7.64e-08!24;UBERON:0004141!7.64e-08!24;UBERON:0003084!7.64e-08!24;UBERON:0007005!7.64e-08!24;UBERON:0004139!7.64e-08!24;UBERON:0004291!7.64e-08!24;UBERON:0000922!1.23e-07!612;UBERON:0000467!1.66e-07!625;UBERON:0003978!1.72e-07!3;UBERON:0009751!1.72e-07!3;UBERON:0000946!1.72e-07!3;UBERON:0002523!1.72e-07!3;UBERON:0005983!1.72e-07!3;UBERON:0002165!1.72e-07!3;UBERON:0002062!1.72e-07!3;UBERON:0007280!1.72e-07!3;UBERON:0004111!1.77e-07!241;UBERON:0000480!1.87e-07!626;UBERON:0004151!3.68e-07!3;UBERON:0005743!4.08e-07!86;UBERON:0002050!6.12e-07!605;UBERON:0005423!6.12e-07!605;UBERON:0001017!6.47e-07!82;UBERON:0006947!8.67e-07!3;UBERON:0004054!8.67e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.60e-14;3!UBERON:0000946;1.60e-14;3!UBERON:0004151;6.39e-14;3!UBERON:0007100;4.85e-13;25!UBERON:0002133;2.37e-10;2!UBERON:0002081;4.58e-10;2!UBERON:0000948;3.12e-09;22!UBERON:0000160;4.27e-08;17!UBERON:0001155;8.09e-08;9!UBERON:0007023;4.09e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.47e-28,114;UBERON:0003978,1.53e-14,3;UBERON:0009751,1.53e-14,3;UBERON:0000946,1.53e-14,3;UBERON:0002523,1.53e-14,3;UBERON:0005983,1.53e-14,3;UBERON:0002165,1.53e-14,3;UBERON:0002062,1.53e-14,3;UBERON:0007280,1.53e-14,3;UBERON:0004151,8.00e-14,3;UBERON:0007100,6.07e-12,27;UBERON:0003103,3.37e-11,68;UBERON:0002133,2.43e-10,2;UBERON:0002081,5.50e-10,2;UBERON:0010227,5.50e-10,2;UBERON:0000948,2.41e-08,24;UBERON:0005498,2.41e-08,24;UBERON:0004140,2.41e-08,24;UBERON:0009881,2.41e-08,24;UBERON:0004141,2.41e-08,24;UBERON:0003084,2.41e-08,24;UBERON:0007005,2.41e-08,24;UBERON:0004139,2.41e-08,24;UBERON:0004291,2.41e-08,24;UBERON:0000160,5.02e-08,17;UBERON:0001155,7.74e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71175595213568,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,0,1.57829449019094,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,3.15496059865568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,1.76915129006678,1.22206028986725,0,0,0,0.067401132980677,3.21031058919516,0,0,0,0,0.789168805698781,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,3.10364852762942,0,1.12990370390266,0,0,0,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,7.81990723562312,2.7499250881402,2.15361907373044,1.59743200399193,0.858452096273142,2.4548860318606,7.65891586348679,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0.394028536495991,0.944182586429966,0,0,0,2.1440859791201,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,8.22263076771249,23.4234414598502,2.89967338743037,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.332787154610557,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,7.2201915215287,0,1.56302802246618,0,0,0,0,0,0,0.126831620387814,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0.672567444437648,0,0,0.620916591138472,0,0,0.0679697329768317,0.131545547125698,0,0,3.13972371402056,0,0,0.913158720509496,0,0,1.57248397188644,0,0,0.347716544605159,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0.647428837187895,0.307988420568741,4.6392577253528,0.485710993059139,0,0,0,0,0,0,1.00326405540328,0.437119121007915,0,1.71603825227734,0,0.588925401344836,0.594092800654172,1.2679671827502,0,0.939839179798536,0.515663103788617,0,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,1.51557396436479,1.33982065078089,0,0,0.639701945702943,2.61870874610114,0.129177819672012,0.931120714437869,0,0.190941474834495,0.606351566874658,1.08858373948481,0.684466602170562,0.134704106029175,0.932388670104793,3.99192427855216,0,0,0,0,0,4.52293343476606,1.22068853494722,0.665756774185513,1.20764276154616,0 | |||
|short_description=p5@SCN7A | |||
}} |
Revision as of 06:26, 21 January 2014
Short description: | p5@SCN7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCN7A_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 9bp_to_ENST00000441411_5end |
EntrezGene: | SCN7A |
HGNC: | 10594 |
UniProt: | C9JII9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.47e-28 | 114 |
valve | 1.53e-14 | 3 |
cardiac mesenchyme | 1.53e-14 | 3 |
cardial valve | 1.53e-14 | 3 |
tunica intima | 1.53e-14 | 3 |
heart layer | 1.53e-14 | 3 |
endocardium | 1.53e-14 | 3 |
endocardial cushion | 1.53e-14 | 3 |
presumptive endocardium | 1.53e-14 | 3 |
cardiac chamber | 8.00e-14 | 3 |
primary circulatory organ | 6.07e-12 | 27 |
compound organ | 3.37e-11 | 68 |
atrioventricular valve | 2.43e-10 | 2 |
cardiac atrium | 5.50e-10 | 2 |
future cardiac atrium | 5.50e-10 | 2 |
heart | 2.41e-08 | 24 |
primitive heart tube | 2.41e-08 | 24 |
primary heart field | 2.41e-08 | 24 |
anterior lateral plate mesoderm | 2.41e-08 | 24 |
heart tube | 2.41e-08 | 24 |
heart primordium | 2.41e-08 | 24 |
cardiac mesoderm | 2.41e-08 | 24 |
cardiogenic plate | 2.41e-08 | 24 |
heart rudiment | 2.41e-08 | 24 |
intestine | 5.02e-08 | 17 |
colon | 7.74e-08 | 9 |