FFCP PHASE1:Hg19::chr2:209118929..209118940,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3417 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5382 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_uc002vcs.2_5end | |||
|coexpression_cluster_id=C4177 | |||
|description=CAGE_peak_8_at_IDH1_5end | |||
|id=chr2:209118929..209118940,- | |||
|ontology_enrichment_celltype=CL:0000136!9.97e-10!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.81e-19;13!CL:0002521;8.60e-11;3!CL:0000083;3.38e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.43e-16,15;CL:0002521,5.39e-11,3;CL:0000083,2.39e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.53e-15!239;DOID:0050687!1.17e-14!143;DOID:162!1.49e-14!235;DOID:305!3.65e-13!106 | |||
|ontology_enrichment_disease_v019=DOID:1793;3.38e-08;4!DOID:4074;1.58e-07;2!DOID:4905;1.58e-07;2!DOID:3498;1.58e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.06e-10,143;DOID:1793,2.39e-08,4;DOID:4074,8.92e-08,2;DOID:4905,8.92e-08,2;DOID:3498,8.92e-08,2;DOID:162,1.06e-07,235;DOID:14566,2.17e-07,239;DOID:305,3.65e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;8.60e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,5.39e-11,3;UBERON:0002072,9.43e-07,5 | |||
|phase1_expression=0.181678379270557,2.5692062866918,0.704772020479856,1.0007329835313,1.78784437770915,0,2.53299878168311,1.89515962028049,1.30592814099919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.971680998056939,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0.130979075497713,0,0,0.97364218096405,0,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.379891534993739,0.397227542439656,0.573673241497627,0,0,0,0,0,1.48181739276657,0,0,0,1.17160715916898,0,0,0,0,0,0,0,0,1.23990937410919,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0.487185025805993,0,0.184099797284599,0.484938170456436,0.355009592516614,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,1.1240175325762,0,0.0925884451585296,3.9096996637239,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0.141775097242386,0.447792613514241,0.290633938513962,0,0.985326475791887,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0.500170521059677,1.89885516589815,0,0,0,0,0,0,2.0694614258501,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0,0.384417447767103,0,0.160853921143607,0,0,0,0,0,0,0.725156697549733,0,5.52485933615378,1.14814448164607,0.364182336013434,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30151357865721,0.206082023295445,0,0,0,0,0,1.06337790121334,0,0,0,0.214840489736547,0,0,0.534192213880424,0.991709492165869,0.576570202095319,0,3.6416801107998,0,0.62962469366128,0,0,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,1.28381696410176,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.682499557039929,0.989838023675989,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0.354761064070598,0.844430541190656,0,0,0,0.0962221127255121,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,1.92495971052672,0,0,0,0,0,0,0,1.48171507906718,0,0,0,0.156679895773023,0,0,0,0,0,0.687010689511529,0.614481528616916,0.671028323677248,0.667396566847634,0.976940477010201,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1426727993731,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0.173624994933292,0,0,0,0,0,0,1.96089234334182,0.975966209950223,0,0.227884111694002,0,0.179515288819544,1.3037684630641,0,0,0,0,0,0.166211681900156,0.225595660617181,0.392125068635479,0.167821586975843,0.189753732724185,0.317873157960757,0,0.326465616318295,0,0.216388639742091,0,0,0.611030144933625,0.296521128680622,0.247127877893006,0.104421949505455,0,0,0,0,1.56531695145672,1.69946265673865,0,0,0,0,0.150323419414493,0,1.32930774541437,0,0.313932918407225,0,1.13843818411917,0.693373365065693,0,0.0979923974143777,0.0870592065804026,0,0,0.19351266257817,0.292357268344742,0.410577285266046,0,2.11814704059601,0,0,0,0,0,0.240476460754601,0,0.39961921916426,3.02589876023623,0.229073192331831,0.686379991447858,4.60975353562079,0.248505071130865,0.471388069233591,0,0,0.509991088181609,1.44475294950759,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0.247247575143499,0.202210631562555,8.76004585481264,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,3.40645944732405,1.34340638123612,0,0,0,0,0,0,0,0.410462603746695,0,0.113312091520126,0.732761168390412,0,0,0,17.7930311399703,0,0.320362237703084,0,0,0,0,0,1.27668251554036,0.544017803369474,1.0027595760908,1.83807346058077,1.63936315354902,2.66991963625398,0,0.122026264901963,0,0,0,0.0620964029413835,0.138348634936231,0,0.909894705249887,1.14186133417987,0,0,0,0.149254802886874,0.701139929541673,0,0,0.251567901752575,0,15.103444514197,0.151230923763239,0,0,0.159296767163702,1.79921244865442,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0.57785949122191,0.643324774124777,1.04397716786085,0.226705925512272,0,0.244736704506468,0,0,0.877136198314828,0,0.192914038270915,0,1.02496607435179,0,0.607719912354764,0,0,0,0,1.96565909307848,0.491545817507439,1.05656061679314,0,0,0,0,0,4.33626473930278,3.11038630016486,0.383683113910955,0,1.88719130227076,0,0.169732529954025,0,0,0,0,0.157723490002507,0,0.352675943690684,0,0,0,0,0,0,0,0,0,2.55184068102667,0.825788063434183,0.183428598521679,0.231051332300676,0,0,0.198916222116275,0,0.20170506870352,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,1.40538670403555,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0.280272163313789,0,0,0.47775168788705,0,0,0,0.173858272302579,0,0,0,0,0,0.473328002922261,0.852134047591577,0,0,0,0,0,0.98150233615243,0.121917924982269,0,0.102662806856247,0,0,0,0,0,1.01651473835064,0,0.603851374266694,0,0,0.470317296361523,0,5.4205605833374,0,0,0,0,0.187967835959707,0.193373663920732,0,0.71421575442263,0,0.401206833445841,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0.218531143927391,0,0.509944148709909,6.68043513163901,1.28652859348783,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.0620747142958579,0.112131862580613,0.12729431655633,0,0,0,0,0.0717222053926763,0,0.244209805832924,4.90945791037491,0,2.0659796484515,0,0,0,0,0.201273793591026,0 | |||
|short_description=p8@IDH1 | |||
}} |
Revision as of 08:09, 21 January 2014
Short description: | p8@IDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_IDH1_5end |
Coexpression cluster: | C4177_lung_bile_mesenchymal_somatostatinoma_testicular_hepatoma_large |
Association with transcript: | -19bp_to_uc002vcs.2_5end |
EntrezGene: | IDH1 |
HGNC: | 5382 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.43e-16 | 15 |
subcutaneous fat cell | 5.39e-11 | 3 |
epithelial cell of pancreas | 2.39e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 5.39e-11 | 3 |
hypodermis | 9.43e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.06e-10 | 143 |
pancreatic cancer | 2.39e-08 | 4 |
pancreas adenocarcinoma | 8.92e-08 | 2 |
pancreatic carcinoma | 8.92e-08 | 2 |
pancreatic ductal adenocarcinoma | 8.92e-08 | 2 |
cancer | 1.06e-07 | 235 |
disease of cellular proliferation | 2.17e-07 | 239 |
carcinoma | 3.65e-07 | 106 |