FFCP PHASE1:Hg19::chr20:35173334..35173350,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10398 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=15754 | |||
|TSSclassifier=strong | |||
|UniProt=Q6IBG1 | |||
|association_with_transcript=46bp_to_CR456843,EU832091,EU832183_5end | |||
|coexpression_cluster_id=C384 | |||
|description=CAGE_peak_6_at_MYL9_5end | |||
|id=chr20:35173334..35173350,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.26e-18!180;CL:0000680!7.44e-13!57;CL:0000056!7.44e-13!57;CL:0000355!7.44e-13!57;CL:0000192!1.09e-12!42;CL:0000514!1.09e-12!42;CL:0000183!1.55e-12!59;CL:0000187!8.90e-12!54;CL:0000057!2.04e-11!75;CL:0000393!1.29e-10!60;CL:0000211!1.29e-10!60;CL:0000359!1.31e-09!32;CL:0000136!2.72e-09!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.78e-10;13!CL:0000359;1.62e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.49e-12,15;CL:0000359,9.88e-09,32;CL:0000192,1.05e-08,43;CL:0000514,1.05e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.61e-13!83;UBERON:0002329!3.61e-13!83;UBERON:0003077!3.61e-13!83;UBERON:0003059!3.61e-13!83;UBERON:0007282!3.61e-13!83;UBERON:0009618!3.61e-13!83;UBERON:0007285!3.61e-13!83;UBERON:0002385!3.69e-13!63;UBERON:0001015!3.69e-13!63;UBERON:0000383!3.69e-13!63;UBERON:0004290!1.82e-12!70;UBERON:0001134!3.23e-12!61;UBERON:0002036!3.23e-12!61;UBERON:0003082!3.23e-12!61;UBERON:0005256!5.18e-12!143;UBERON:0002100!7.50e-10!216;UBERON:0000486!1.27e-09!82;UBERON:0000481!3.37e-08!347;UBERON:0004872!7.05e-08!84;UBERON:0001009!9.80e-08!113;UBERON:0003104!2.60e-07!238;UBERON:0009142!2.60e-07!238;UBERON:0004535!6.07e-07!110;UBERON:0001637!9.18e-07!42;UBERON:0003509!9.18e-07!42;UBERON:0004572!9.18e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;3.05e-07;22!UBERON:0000079;3.05e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,4.35e-08,122;UBERON:0003064,1.46e-07,28;UBERON:0000926,2.02e-07,315;UBERON:0004120,2.02e-07,315;UBERON:0006603,2.02e-07,315;UBERON:0003101,2.54e-07,22;UBERON:0000079,2.54e-07,22;UBERON:0003104,2.92e-07,160;UBERON:0009142,2.92e-07,160;UBERON:0005156,3.03e-07,59;UBERON:0000990,3.03e-07,59 | |||
|phase1_expression=4.1786027232228,4.06790995392868,2.25527046553554,12.0087958023756,8.49226079411847,6.97870819280295,20.2639902534648,1.26343974685366,0.261185628199839,0.737201809504527,4.88460817580699,0,1.05506791291381,0,0.662794751455832,4.70627602516243,2.41077811209591,3.65155045193687,2.43966399395253,0.123121058076788,0.612002073732759,0.626909442956176,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,0.50133791063589,0.579386075843295,0,0.486634870302636,0.0945348171640679,1.33037638477538,0.263504357079378,0.261958150995425,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0.550236083880135,0,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0,0.81014194788176,0,0.22452937262617,0,0,0,0,0,0,0,2.48485975847659,0.506522046658319,0.529636723252875,0.286836620748814,0.709336764396714,4.48542080113846,2.1349799145941,2.96001058100592,0.933633106199299,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0,0.408308342509787,0.245668634623536,0.103325781175765,3.56400857184616,4.45080472701402,2.73048408581408,2.87447256726495,0,0,0.277064115484183,3.95079858792754,5.51678032438235,2.85452311922534,0.567160915800105,0.538168907066586,0.640672166455702,1.27159140695737,0,0.92747276314595,0.257640540045629,1.11670113798954,0,0.974370051611986,0.504867548488229,0.552299391853796,0.646584227275248,1.42003837006646,1.81353776809752,1.01736355386293,0,0,0,0.243947412259191,0.132529768321485,0,0.207322110030741,0,0,1.56449532329816,2.57296375277154,1.38134921352481,1.39310378409594,2.16563844500876,0.354920400119532,0.168584690078102,0,0.55146986366197,0,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.70445216541493,0.288732895522148,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.775630294546667,0,1.690605505112,0.797814349754612,1.04007436911366,0.257207374262142,0,0,0.428933980974443,0,1.64648067356154,0.325736184293735,0.355391948742546,0,0,1.74306691720059,1.09970290300263,0,0,0,1.19812427745791,1.14861935834114,0,1.59259437334337,0.821905290201534,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0.542530047399471,3.11956292296211,6.0665856191035,2.05013139544115,1.28855556491985,0.601892199455438,13.6444502433591,2.0694614258501,0.664225598535437,1.84369168541703,0.695068915744663,1.17480694477644,0.686286847621712,0,0,0,0,0,0,1.73675465473144,0.460385919864187,2.24528075546459,0.896974044789907,3.07024349440022,2.2519548960105,5.93672265779964,0.308419387605311,1.59805552781814,0.164254312027618,0.519254429183621,1.16210378459959,0.120859449591622,0.40101294060657,0,1.14814448164607,1.63882051206045,2.75361271414791,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,0.270946437543853,3.01013864312912,0,0,0,0,0,0.256450125116389,0.984043937099117,0.325378394664303,0.206082023295445,0,0,0,0,3.21367859688319,0.193341436584244,0.308097234229289,0.460511024178389,0.275673144969061,0.214840489736547,0.435050081742686,0.255679882248303,0.356128142586949,0.165284915360978,0.384380134730212,0,0,3.71876439437829,0.31481234683064,0,0.308033580176089,0.532306030317022,1.73986598415015,1.48259375283136,1.00187420719394,0.372158369359667,0.632758849437452,2.66882271493355,0.767693373934002,0.42793898803392,0.636406495851874,2.35484592059769,0.179872457583315,0.54907405947211,0.824686816419805,1.01091240786658,0,1.26377536871694,0.975267478179181,0.487426979262569,0,1.09199929126389,1.69686518344455,0,1.10273068709225,0.66343897524122,2.19225442626881,1.15755106853338,2.62357900818653,1.21746226177622,2.16876448669825,1.12678241012897,0.430234056612155,0.785992328104969,2.49669736036875,0.354761064070598,0.211107635297664,1.64647446479951,0,0,0,0,0,0.470719003883896,0,0,0.886860307073351,0,0,0.764637207142375,0.569647187174163,0,0,0,0.540031437238115,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.970884173996107,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,5.37969568277888,0,0,0.102268682502155,0,7.15391051622157,0,0,0,5.81996093257908,0,7.77958931012458,1.93866549219044,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,1.31631238292384,0,0,1.30815439456455,0.227884111694002,0,0.0897576444097721,0.108647371922008,0,1.74035427463538,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,3.98104772431402,2.65372693510018,2.4441205797345,0,0,0,0,0,0,0,0,0,1.97292201424695,3.62972148145992,0,0.189559738885464,0,0,0,0,0,0,0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| |||
|short_description=p6@MYL9 | |||
}} |
Revision as of 11:03, 21 January 2014
Short description: | p6@MYL9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MYL9_5end |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | 46bp_to_CR456843, EU832091, EU832183_5end |
EntrezGene: | MYL9 |
HGNC: | 15754 |
UniProt: | Q6IBG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.49e-12 | 15 |
vascular associated smooth muscle cell | 9.88e-09 | 32 |
smooth muscle cell | 1.05e-08 | 43 |
smooth muscle myoblast | 1.05e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 4.35e-08 | 122 |
intermediate mesoderm | 1.46e-07 | 28 |
mesoderm | 2.02e-07 | 315 |
mesoderm-derived structure | 2.02e-07 | 315 |
presumptive mesoderm | 2.02e-07 | 315 |
male organism | 2.54e-07 | 22 |
male reproductive system | 2.54e-07 | 22 |
mesenchyme | 2.92e-07 | 160 |
entire embryonic mesenchyme | 2.92e-07 | 160 |
reproductive structure | 3.03e-07 | 59 |
reproductive system | 3.03e-07 | 59 |