FFCP PHASE1:Hg19::chr20:55091968..55091976,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16100 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-266bp_to_ENST00000481560_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_6_at_FAM209A_5end | |||
|id=chr20:55091968..55091976,+ | |||
|ontology_enrichment_celltype=CL:0002566!3.13e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002566;1.71e-66;1!CL:0000148;1.10e-59;10!CL:0000147;4.85e-43;14!CL:0000710;1.56e-30;20!CL:0002567;2.93e-23;3!CL:0000075;5.98e-23;27!CL:0002077;1.59e-17;34!CL:0000150;1.21e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,2.39e-66,1;CL:0000148,1.10e-59,10;CL:0000541,1.10e-59,10;CL:0000147,4.85e-43,14;CL:0000710,1.56e-30,20;CL:0002567,2.62e-23,3;CL:0000075,5.98e-23,27;CL:0002077,1.78e-18,34;CL:0000333,7.46e-15,41;CL:0000133,8.52e-11,59;CL:0000221,4.40e-09,72;CL:0000150,1.21e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000133;4.44e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!4.68e-12!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.43e-53!57;UBERON:0005068!2.43e-53!57;UBERON:0006241!2.43e-53!57;UBERON:0007135!2.43e-53!57;UBERON:0002616!7.55e-43!59;UBERON:0005743!2.77e-39!86;UBERON:0000955!9.31e-39!69;UBERON:0006238!9.31e-39!69;UBERON:0001017!3.03e-38!82;UBERON:0002780!1.13e-37!41;UBERON:0001890!1.13e-37!41;UBERON:0006240!1.13e-37!41;UBERON:0003075!1.01e-36!86;UBERON:0007284!1.01e-36!86;UBERON:0003080!1.04e-36!42;UBERON:0000073!4.07e-35!94;UBERON:0001016!4.07e-35!94;UBERON:0002346!7.23e-35!90;UBERON:0002020!2.46e-31!34;UBERON:0003528!2.46e-31!34;UBERON:0007023!2.87e-31!115;UBERON:0001893!4.05e-31!34;UBERON:0002791!8.08e-28!33;UBERON:0003056!3.76e-27!61;UBERON:0000033!6.92e-26!123;UBERON:0001869!1.30e-24!32;UBERON:0002298!1.45e-24!8;UBERON:0000153!1.93e-24!129;UBERON:0007811!1.93e-24!129;UBERON:0004121!2.35e-22!169;UBERON:0000924!1.04e-21!173;UBERON:0006601!1.04e-21!173;UBERON:0002308!1.10e-21!9;UBERON:0000125!1.10e-21!9;UBERON:0006331!1.60e-17!3;UBERON:0000988!1.89e-17!3;UBERON:0003076!2.21e-17!15;UBERON:0003057!2.21e-17!15;UBERON:0002619!3.87e-17!22;UBERON:0002420!4.44e-15!9;UBERON:0007245!4.44e-15!9;UBERON:0010009!4.44e-15!9;UBERON:0010011!4.44e-15!9;UBERON:0000454!4.44e-15!9;UBERON:0000956!5.43e-15!25;UBERON:0000203!5.43e-15!25;UBERON:0001950!5.93e-15!20;UBERON:0009663!7.86e-13!7;UBERON:0001897!1.81e-12!2;UBERON:0002148!3.17e-12!2;UBERON:0009662!3.17e-12!2;UBERON:0000025!4.06e-12!194;UBERON:0004733!2.13e-11!12;UBERON:0002028!2.13e-11!12;UBERON:0007277!2.13e-11!12;UBERON:0004732!1.68e-10!13;UBERON:0002021!3.19e-10!5;UBERON:0000349!3.19e-10!5;UBERON:0004111!1.09e-09!241;UBERON:0002240!1.58e-08!3;UBERON:0001896!2.95e-08!3;UBERON:0005290!2.95e-08!3;UBERON:0010096!2.95e-08!3;UBERON:0000477!3.49e-08!286;UBERON:0000475!4.94e-08!365;UBERON:0000483!5.86e-08!309;UBERON:0001894!6.90e-08!7;UBERON:0006222!6.90e-08!7;UBERON:0000119!7.93e-08!312;UBERON:0003112!4.69e-07!1;UBERON:0000032!4.69e-07!1;UBERON:0005253!4.69e-07!1;UBERON:0003128!4.69e-07!1;UBERON:0002241!4.69e-07!1;UBERON:0001703!4.69e-07!1;UBERON:0004761!4.69e-07!1;UBERON:0009617!4.69e-07!1;UBERON:0002038!5.26e-07!1;UBERON:0009661!5.26e-07!1;UBERON:0007190!9.25e-07!1;UBERON:0001882!9.79e-07!1;UBERON:0005403!9.79e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09543051164158,0,2.34434894420094,0,0,0,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.620964029413834,0,0,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0.484426936895553,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0.131545547125698,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981542335574726,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@FAM209A | |||
}} |
Revision as of 12:21, 21 January 2014
Short description: | p6@FAM209A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FAM209A_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -266bp_to_ENST00000481560_5end |
EntrezGene: | FAM209A |
HGNC: | 16100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 2.39e-66 | 1 |
melanocyte | 1.10e-59 | 10 |
melanoblast | 1.10e-59 | 10 |
pigment cell | 4.85e-43 | 14 |
neurecto-epithelial cell | 1.56e-30 | 20 |
light melanocyte | 2.62e-23 | 3 |
columnar/cuboidal epithelial cell | 5.98e-23 | 27 |
ecto-epithelial cell | 1.78e-18 | 34 |
migratory neural crest cell | 7.46e-15 | 41 |
neurectodermal cell | 8.52e-11 | 59 |
ectodermal cell | 4.40e-09 | 72 |
glandular epithelial cell | 1.21e-08 | 9 |