FFCP PHASE1:Hg19::chr20:57483131..57483142,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81027 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16257 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-232bp_to_JF432703_5end | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_3_at_TUBB1_5end | |||
|id=chr20:57483131..57483142,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.20e-27!140;CL:0002057!2.17e-26!42;CL:0002031!3.81e-26!124;CL:0000988!6.84e-25!182;CL:0000037!8.65e-25!172;CL:0000566!8.65e-25!172;CL:0002087!1.48e-24!119;CL:0000860!4.08e-24!45;CL:0002032!4.34e-24!165;CL:0000837!4.34e-24!165;CL:0000766!4.16e-21!76;CL:0000839!1.96e-18!70;CL:0000557!4.65e-18!71;CL:0002194!2.80e-16!63;CL:0000576!2.80e-16!63;CL:0000040!2.80e-16!63;CL:0000559!2.80e-16!63;CL:0002009!1.48e-15!65;CL:0000763!2.57e-15!112;CL:0000049!2.57e-15!112;CL:0002393!5.01e-12!9;CL:0002397!5.01e-12!9;CL:0002320!1.43e-10!365;CL:0000945!4.52e-10!24;CL:0000826!4.52e-10!24;CL:0000134!6.11e-10!358;CL:0000838!8.32e-09!52;CL:0000219!1.15e-08!390;CL:0000542!1.48e-08!53;CL:0000051!1.48e-08!53;CL:0000767!3.16e-08!3;CL:0000623!3.47e-08!3;CL:0000825!3.47e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000767;9.95e-41;3!CL:0000623;3.35e-40;3!CL:0000094;9.94e-16;8!CL:0000081;1.32e-11;11!CL:0000097;2.06e-11;5!CL:0000236;5.01e-10;13!CL:0002393;1.15e-09;6!CL:0002397;1.15e-09;6!CL:0000163;9.93e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,1.14e-40,3;CL:0000623,1.96e-40,3;CL:0000825,1.96e-40,3;CL:0000738,1.72e-17,136;CL:0000094,1.05e-15,8;CL:0002032,1.47e-14,161;CL:0000837,1.47e-14,161;CL:0000037,6.84e-14,168;CL:0000988,4.13e-13,177;CL:0002031,5.49e-12,120;CL:0000081,1.37e-11,11;CL:0000097,1.95e-11,5;CL:0002028,1.95e-11,5;CL:0000766,8.81e-11,72;CL:0000236,2.39e-09,14;CL:0000838,5.04e-09,52;CL:0000542,7.57e-09,53;CL:0000051,7.57e-09,53;CL:0002087,2.55e-08,115;CL:0000763,5.90e-07,108;CL:0000049,5.90e-07,108;CL:0000163,9.64e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.56e-18!86;UBERON:0002371!1.14e-17!80;UBERON:0004765!2.06e-14!101;UBERON:0001434!2.06e-14!101;UBERON:0002390!4.45e-14!102;UBERON:0003061!4.45e-14!102;UBERON:0002193!4.99e-12!112;UBERON:0002384!7.65e-10!375;UBERON:0002405!9.46e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.236132343941038,2.36018566109342,2.68680578668049,4.18003532953405,0,0,0,0.232401601740905,0,0.293600439334847,1.10799081706375,0.401088894940283,0.868043482863407,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0.426224750532694,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0.434377689410233,0,0,0,0.633765858935825,0.850417199860174,1.04829322754188,0.336985893439485,0,0,0,0,0.365328307529268,0,0,0,0,0.400395987036012,0,0,0,8.53819453664173,7.04684627245127,3.82273228125229,1.32171328579026,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,1.29707958075265,1.38866676769018,0.190493682876507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36436912242313,1.50939302401662,2.95188983443421,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.473107245101804,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76205998859206,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0.397832444232549,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@TUBB1 | |||
}} |
Revision as of 12:29, 21 January 2014
Short description: | p3@TUBB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TUBB1_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -232bp_to_JF432703_5end |
EntrezGene: | TUBB1 |
HGNC: | 16257 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 1.14e-40 | 3 |
natural killer cell | 1.96e-40 | 3 |
pro-NK cell | 1.96e-40 | 3 |
leukocyte | 1.72e-17 | 136 |
granulocyte | 1.05e-15 | 8 |
hematopoietic oligopotent progenitor cell | 1.47e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-14 | 161 |
hematopoietic stem cell | 6.84e-14 | 168 |
hematopoietic cell | 4.13e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 5.49e-12 | 120 |
blood cell | 1.37e-11 | 11 |
mast cell | 1.95e-11 | 5 |
basophil mast progenitor cell | 1.95e-11 | 5 |
myeloid leukocyte | 8.81e-11 | 72 |
B cell | 2.39e-09 | 14 |
lymphoid lineage restricted progenitor cell | 5.04e-09 | 52 |
lymphocyte | 7.57e-09 | 53 |
common lymphoid progenitor | 7.57e-09 | 53 |
nongranular leukocyte | 2.55e-08 | 115 |
myeloid cell | 5.90e-07 | 108 |
common myeloid progenitor | 5.90e-07 | 108 |
endocrine cell | 9.64e-07 | 9 |