FFCP PHASE1:Hg19::chr21:26797257..26797267,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1283 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-236bp_to_ENST00000440205_5end | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_7_at_LINC00158_5end | |||
|id=chr21:26797257..26797267,- | |||
|ontology_enrichment_celltype=CL:0000945!1.15e-32!24;CL:0000826!1.15e-32!24;CL:0000542!1.98e-22!53;CL:0000051!1.98e-22!53;CL:0000838!1.46e-18!52;CL:0000946!6.65e-14!1;CL:0000786!6.65e-14!1;CL:0000980!6.65e-14!1;CL:0002087!2.99e-11!119;CL:0000738!2.31e-09!140;CL:0002031!8.03e-09!124;CL:0002032!9.82e-08!165;CL:0000837!9.82e-08!165;CL:0000785!1.36e-07!2;CL:0000955!1.36e-07!2;CL:0000818!1.36e-07!2;CL:0000954!1.36e-07!2;CL:0000816!1.36e-07!2;CL:0000037!2.31e-07!172;CL:0000566!2.31e-07!172;CL:0000988!7.04e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.07e-42;24!CL:0000946;2.05e-29;1!CL:0000786;2.05e-29;1!CL:0000542;3.76e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.48e-42,24;CL:0000826,2.48e-42,24;CL:0000946,4.20e-29,1;CL:0000786,4.20e-29,1;CL:0000980,4.20e-29,1;CL:0000838,8.94e-20,52;CL:0000542,2.08e-19,53;CL:0000051,2.08e-19,53;CL:0000785,2.74e-15,2;CL:0000955,2.74e-15,2;CL:0000818,2.74e-15,2;CL:0000954,2.74e-15,2;CL:0000816,2.74e-15,2;CL:0000817,1.20e-10,3;CL:0002087,5.30e-09,115;CL:0002031,1.23e-08,120;CL:0000738,1.21e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000954;1.91e-15;2!CL:0000051;3.76e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.68e-20!10;DOID:3371!3.50e-14!1;DOID:4549!3.50e-14!1;DOID:5861!3.50e-14!1;DOID:6496!3.50e-14!1;DOID:630!5.15e-14!1;DOID:0050177!5.15e-14!1;DOID:0050427!5.15e-14!1;DOID:0060060!7.55e-14!1;DOID:0060061!7.55e-14!1;DOID:8691!7.55e-14!1;DOID:2355!1.10e-13!1;DOID:12603!1.42e-13!1;DOID:74!1.75e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:630;2.05e-29;1!DOID:0050177;2.05e-29;1!DOID:3371;2.05e-29;1!DOID:4549;2.05e-29;1!DOID:5861;2.05e-29;1!DOID:6496;2.05e-29;1!DOID:0050427;2.05e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.99e-30,1;DOID:4549,9.99e-30,1;DOID:5861,9.99e-30,1;DOID:6496,9.99e-30,1;DOID:630,2.37e-29,1;DOID:0050177,2.37e-29,1;DOID:0050427,2.37e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!4.29e-37!3;UBERON:0004854!4.29e-37!3;UBERON:0009034!4.29e-37!3;UBERON:0002095!4.29e-37!3;UBERON:0004782!4.29e-37!3;UBERON:0003281!4.29e-37!3;UBERON:0009664!4.29e-37!3;UBERON:0002296!4.29e-37!3;UBERON:0005602!4.29e-37!3;UBERON:0001179!4.29e-37!3;UBERON:0006293!4.29e-37!3;UBERON:0004177!2.56e-16!7;UBERON:0000945!2.33e-14!8;UBERON:0010039!2.33e-14!8;UBERON:0004457!9.05e-10!12;UBERON:0000042!9.05e-10!12;UBERON:0003127!2.25e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;9.43e-11;3!UBERON:0004755;9.43e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,7.42e-11,3;UBERON:0004755,7.42e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29902789771517,1.72411237844886,1.65292640758726,0,0,0,0,0,0,0,3.41206157969812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76512253383001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.699588091474503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | |||
|short_description=p7@LINC00158 | |||
}} |
Revision as of 13:07, 21 January 2014
Short description: | p7@LINC00158 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LINC00158_5end |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | -236bp_to_ENST00000440205_5end |
EntrezGene: | NA |
HGNC: | 1283 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.48e-42 | 24 |
pro-B cell | 2.48e-42 | 24 |
antibody secreting cell | 4.20e-29 | 1 |
plasma cell | 4.20e-29 | 1 |
plasmablast | 4.20e-29 | 1 |
lymphoid lineage restricted progenitor cell | 8.94e-20 | 52 |
lymphocyte | 2.08e-19 | 53 |
common lymphoid progenitor | 2.08e-19 | 53 |
mature B cell | 2.74e-15 | 2 |
pre-B-II cell | 2.74e-15 | 2 |
transitional stage B cell | 2.74e-15 | 2 |
small pre-B-II cell | 2.74e-15 | 2 |
immature B cell | 2.74e-15 | 2 |
precursor B cell | 1.20e-10 | 3 |
nongranular leukocyte | 5.30e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.23e-08 | 120 |
leukocyte | 1.21e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 7.42e-11 | 3 |
skeletal tissue | 7.42e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.99e-30 | 1 |
extraosseous chondrosarcoma | 9.99e-30 | 1 |
myxoid chondrosarcoma | 9.99e-30 | 1 |
extraskeletal myxoid chondrosarcoma | 9.99e-30 | 1 |
genetic disease | 2.37e-29 | 1 |
monogenic disease | 2.37e-29 | 1 |
xeroderma pigmentosum | 2.37e-29 | 1 |